rna2637, rna2637 (mRNA) Nannochloropsis gaditana

Overview
Namerna2637
Unique Namerna2637
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length923
Alignment locationCM002459.1:858625..859869 -

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Properties
Property NameValue
ProductRNA binding protein
Orig transcript idgnl|cribi|Naga_100044g1.1058.mrna
Orig protein idgnl|cribi|Naga_100044g1.1058
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:858625..859869 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100044g1gene2521Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM28044.1cds2629Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna2637rna2637-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna2637 ID=rna2637|Name=rna2637|organism=Nannochloropsis gaditana|type=mRNA|length=923bp
GACATTTCACATGCAAACTTGTTACATATACAGCGCGCAGGGCTCTTGAC
AGCAAGTGGAAGTAGCTACGTGCGTTAGGGTAAATGACCAGGCAGTGCTT
AAGGCTGTTCAGCCTGCTCGTCTTGTTACCATCGGTGGCCTCTTTCATTC
CACATTCGTCCTCCTATTGTCTGTCGGTAATGCATTCCTCAATGGTCTGT
CGTGCGGAGTCTGGCAGTCAGCACCTAAGTGGAGGGCCTTCAGGCGCCCT
CAGCCCCCTCGCATCCGACCTCCCGTCTCCCCCTCCTGCCTCTCCTCGAG
ACCTCACTACGCCGGACCAGGAAGGCACGAAAACCTGCCGCGCCTGCCTT
AAGCAGTTCAACCCGAGCGAAAACCCGCCCTCGGCATGCACGTTCCATCC
AGGGATTTATACGGGTCGCCTGGCACGGATAGATGACACGGATCCAAGTG
GCGCAAAGGACTTCTTCTGGTCGTGCTGCGGGGGGGAGCGAGAGCACCCA
GGATGCACACACGACCACCACCGAAGTTTTGACGACCCACCAGGTCCTTG
GCAGAGTGGATTCCAGTGACGCGACACTTGAATGTTCGCAAGTGCAGCCC
TGGGGGGTTGCTGGGAGACCATGGGTGGGACAAGTAGACAATTTGGGGCA
GCTCATGCAGGCACTAATTGCTTATGCCGAATGCAACGCGTGGAAAACCG
TGGAGATGTGGCTTTATTTAAAGTGATTTAAAGGAAATACATCTGCACAT
GATATCACCCATAGCTATAGACCACAGTTCTCCCTCCCTCGTTACACGGG
CCCGCCCGCCTTCGACCCTTCCTACGCCATGCATACGCCCCACCCTCCAC
GCCAAAAGCTAGGCAAAGAGCGCGTCCAAAGCCATCTCCTGCTGCTCCAT
CTCACTGAACTCCTCCTCCCCCC
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protein sequence of rna2637

>rna2637-protein ID=rna2637-protein|Name=rna2637|organism=Nannochloropsis gaditana|type=polypeptide|length=348bp
GGPQAKRSREEPVASPHQHQQPRPASRPAPHPGPTPPLSRPPPLPPPPAH
AGQGAPAARLAPPSAASPPATGPAHVAALTRQRLALAKKKESLYATQKQL
REQMLAASLGTGKGRKGEGLEQARREVAAAEERLKGAQREVQGLLEAVAR
LPAVESSRAERGSGLARAMAPSAAGGRGGGGGGRGGRVGEGGGGRDSGGR
LVSRNRVPMRIDHRTTHLKLCTRPPGLAAASLRRFFSNFGTVEAVEMAGG
QEESGPAVVKFATRWAAENAKAKAKYVGKHPLVLEWHDPRTAGNGKGEFN
EVKAGGEEAGGEEAGGGRRSSVRWSSRRWLWTRSLPSFWRGGWGVCMA
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mRNA from alignment at CM002459.1:858625..859869-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna2637 ID=rna2637|Name=rna2637|organism=Nannochloropsis gaditana|type=mRNA|length=1245bp|location=Sequence derived from alignment at CM002459.1:858625..859869- (Nannochloropsis gaditana)
GGCGGGCCCCAGGCCAAGCGCTCTCGGGAAGAGCCGGTTGCTTCGCCGCA
CCAGCACCAACAGCCGCGTCCTGCGTCCCGCCCGGCCCCTCACCCTGGCC
CGACTCCGCCCCTGTCACGGCCTCCGCCCCTGCCCCCTCCCCCCGCGCAC
GCGGGACAAGGGGCCCCTGCGGCCCGACTTGCCCCGCCCTCGGCCGCCTC
CCCGCCCGCGACGGGCCCTGCCCACGTGGCAGCCCTGACCCGCCAACGGC
TGGCGCTGGCCAAGAAGAAGGAAAGCTTGTACGCGACGCAGAAACAATTG
CGCGAACAGATGCTGGCGGCGAGTCTGGGCACGGGAAAAGGGAGGAAGGG
AGAGGGCCTGGAGCAGGCAAGGAGGGAGGTGGCGGCGGCGGAGGAGCGGC
TGAAAGGGGCGCAGAGGGAGGTGCAGGGCTTGCTGGAGGCGGTGGCGCGA
CTACCCGCGGTGGAAAGCTCAAGGGCAGAGCGGGGAAGTGGACTGGCAAG
GGCGATGGCTCCCTCGGCCGCGGGGGGGCGAGGAGGGGGAGGGGGAGGAA
GGGGAGGAAGGGTCGGGGAAGGCGGGGGAGGGCGGGACAGTGGAGGTCGC
CTCGTGTCCCGGAATCGCGTTCCCATGCGGATCGACCACCGGACCACGCA
TTTGAAGCTGTGCACGAGGCCACCGGGGCTGGCGGCGGCCTCGCTGCGTC
GCTTCTTCAGCAATTTCGGGACCGTGGAGGCGGTGGAAATGGCAGGGGGC
CAGGAGGAAAGCGGCCCGGCGGTGGTCAAATTTGCCACGCGCTGGGCTGC
CGAGAATGCGAAGGCGAAGGCCAAGTATGTGGGGAAGCATCCCTTGGTGC
TGGAGTGGCATGACCCTCGGACGGCCGGGAACGGGAAGGGGGAATTCAAT
GAGGTGAAGGCGGGCGGAGAGGAGGCGGGCGGAGAGGAGGCGGGGGGGGG
GAGGAGGAGTTCAGTGAGATGGAGCAGCAGGAGATGGCTTTGGACGCGCT
CTTTGCCTAGCTTTTGGCGTGGAGGGTGGGGCGTATGCATGGCGTAGGAA
GGGTCGAAGGCGGGCGGGCCCGTGTAACGAGGGAGGGAGAACTGTGGTCT
ATAGCTATGGGTGATATCATGTGCAGATGTATTTCCTTTAAATCACTTTA
AATAAAGCCACATCTCCACGGTTTTCCACGCGTTGCATTCGGCATAAGCA
ATTAGTGCCTGCATGAGCTGCCCCAAATTGTCTACTTGTCCCACC
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Coding sequence (CDS) from alignment at CM002459.1:858625..859869-

>rna2637 ID=rna2637|Name=rna2637|organism=Nannochloropsis gaditana|type=CDS|length=1047bp|location=Sequence derived from alignment at CM002459.1:858625..859869- (Nannochloropsis gaditana)
GGCGGGCCCCAGGCCAAGCGCTCTCGGGAAGAGCCGGTTGCTTCGCCGCA
CCAGCACCAACAGCCGCGTCCTGCGTCCCGCCCGGCCCCTCACCCTGGCC
CGACTCCGCCCCTGTCACGGCCTCCGCCCCTGCCCCCTCCCCCCGCGCAC
GCGGGACAAGGGGCCCCTGCGGCCCGACTTGCCCCGCCCTCGGCCGCCTC
CCCGCCCGCGACGGGCCCTGCCCACGTGGCAGCCCTGACCCGCCAACGGC
TGGCGCTGGCCAAGAAGAAGGAAAGCTTGTACGCGACGCAGAAACAATTG
CGCGAACAGATGCTGGCGGCGAGTCTGGGCACGGGAAAAGGGAGGAAGGG
AGAGGGCCTGGAGCAGGCAAGGAGGGAGGTGGCGGCGGCGGAGGAGCGGC
TGAAAGGGGCGCAGAGGGAGGTGCAGGGCTTGCTGGAGGCGGTGGCGCGA
CTACCCGCGGTGGAAAGCTCAAGGGCAGAGCGGGGAAGTGGACTGGCAAG
GGCGATGGCTCCCTCGGCCGCGGGGGGGCGAGGAGGGGGAGGGGGAGGAA
GGGGAGGAAGGGTCGGGGAAGGCGGGGGAGGGCGGGACAGTGGAGGTCGC
CTCGTGTCCCGGAATCGCGTTCCCATGCGGATCGACCACCGGACCACGCA
TTTGAAGCTGTGCACGAGGCCACCGGGGCTGGCGGCGGCCTCGCTGCGTC
GCTTCTTCAGCAATTTCGGGACCGTGGAGGCGGTGGAAATGGCAGGGGGC
CAGGAGGAAAGCGGCCCGGCGGTGGTCAAATTTGCCACGCGCTGGGCTGC
CGAGAATGCGAAGGCGAAGGCCAAGTATGTGGGGAAGCATCCCTTGGTGC
TGGAGTGGCATGACCCTCGGACGGCCGGGAACGGGAAGGGGGAATTCAAT
GAGGTGAAGGCGGGCGGAGAGGAGGCGGGCGGAGAGGAGGCGGGGGGGGG
GAGGAGGAGTTCAGTGAGATGGAGCAGCAGGAGATGGCTTTGGACGCGCT
CTTTGCCTAGCTTTTGGCGTGGAGGGTGGGGCGTATGCATGGCGTAG
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Synonyms
Publications