rna2606, rna2606 (mRNA) Nannochloropsis gaditana

Overview
Namerna2606
Unique Namerna2606
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1076
Alignment locationCM002459.1:769926..771985 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100044g33.1078.mrna
Orig protein idgnl|cribi|Naga_100044g33.1078
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:769926..771985 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100044g33gene2492Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna2606rna2606-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM28064.1cds2598Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna2606 ID=rna2606|Name=rna2606|organism=Nannochloropsis gaditana|type=mRNA|length=1076bp
CTTTCCCCCTTCGTTGAGTGCCGCCGGAAGATCACCCACAGAAGACGCAG
AGGCTAGTGTGATAGAGGAAGAAATCGCCCGAATGGAACCCCAAGCCAAT
GAATGTGTAACGAAGGCTAGGGCCTGATGAGGACGGGGGTGCGCGTGCGA
CGTAGGTCCCGCAGCGAACGACGAGGACGAAGAGACAGAGGCCACCAAGA
ACTGCAACAAGGGCGTCCGACTCCTCATCCACCTGTTGCAATAATATCAG
TCACGTGGTAGATCGCTCTTGTTGTTGTCTCGGTTTTTATTCAGTGACTT
TACTTGTCATGTGGAAGAACCTCCTGCCTCCGCCTTCCCACGTTGCACTT
TTTATCGCTTTGGCTTGAGGACACGGGACACCCCGTGAAAGCTCATCACG
CATCATGTGGCGGTGGTAATCTCCCACAATAATCATCCACGACTCATTCG
TTTCATCTTGTTAAAGCAGCCATTCTTTGTACGAGCCATGGCCTCAAGAC
CAAACCGCATCCGGTGCTCGAGCCCTCTGGCGCTGGTGACGGTGATCCTT
GTCTGCATTGCACACTCAACCTGGGCCGCTATTGGTATTTCTCCGCGCCT
TTGCACCGTGACACCCTTTCAGCGGGGTAATGGGCGGCAATCTCCAGCAT
TTCAACGGTTTATGAGCGTTCGTGGGGGCATGCAGATCAACGTGAAGACA
CTCAACGGGAAGACCATCTCGGTGGACGTGGAAGAAGGCGATTCCATCGA
CGAGGTGAAAGCCAAGATCGCGGAGAAGGAGGGCATTCCCCCTGACCAGC
AGCGTCTCATCTTTGGAGGCAAGCAGTTGGACGGGCTCAAGTCCCTGTCT
GACTACGACATCGGCGACGACTCCACCTTGCACTTGGTCCTGCGGCTTCG
GGGGGGCTGGCCGTGGGTGCGATGAGGAGAGAGGGGCGGGGCCCTTATCG
AGTACGAAAGGCGGAAGGAAGGGGTGCGGGGGGGAAGCGAGGCATGGAAA
GGAGGGTGCACATAGTCTAATCCCGGGATACCTCCGGACAAGGCATCTAT
CACAAGGCTCAGTCGAGTCTTCTCGC
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protein sequence of rna2606

>rna2606-protein ID=rna2606-protein|Name=rna2606|organism=Nannochloropsis gaditana|type=polypeptide|length=307bp
MRIRREPLRLAAFLVIVVATGICLSPVAAFRPIYPLLQSPRPWGLQNSPE
TESFLALVLSRDLATAGSREDPHSVRPKYRIFSLVRLAGTKSLDLEAETS
SEASLPLWEVIRELGQRQVDFNVLQPREELDALLYQARLGKVNTKSERVA
STGTASSSRPLPGATERKEEAVALASQAKNVSQTPPRGDLEARLPSVSFA
PPSLAPLPVLSASEAGTASTGPLTRRPPPPPSVAAAALPRFHSIADALAW
AGSLSKEEIVVELEFLRVRGPLGEGTEKRLLFLCTYGTRIWGQRVWMLFC
KRGKDSV
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mRNA from alignment at CM002459.1:769926..771985-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna2606 ID=rna2606|Name=rna2606|organism=Nannochloropsis gaditana|type=mRNA|length=2060bp|location=Sequence derived from alignment at CM002459.1:769926..771985- (Nannochloropsis gaditana)
ATGAGAATACGCCGCGAGCCCCTCCGGCTTGCGGCATTTCTAGTTATTGT
AGTGGCTACAGGCATATGCTTGTCGCCTGTCGCTGCTTTCCGTCCAATTT
ATCCCCTCCTTCAGAGTCCGCGACCATGGGGCCTTCAAAACTCGCCTGAA
ACAGAGTCGTTCCTGGCACTTGTGCTGTCGCGAGACCTTGCGACCGCAGG
CTCTCGTGAAGATCCGCACTCTGTCAGACCTAAGTACCGAATCTTCTCTT
TGGTGCGACTCGCTGGCACCAAAAGTCTGGACTTGGAGGCCGAAACCTCG
TCTGAGGCCTCCCTCCCTTTGTGGGAGGTTATAAGGGAACTCGGCCAACG
CCAAGTGGACTTCAATGTCCTGCAGCCCAGGGAAGAGCTTGACGCCCTCC
TATACCAGGCACGTCTTGGAAAGGTAAATACGAAAAGCGAGAGGGTGGCG
TCGACTGGGACCGCGAGCTCATCAAGGCCTCTCCCAGGCGCGACGGAACG
GAAAGAGGAAGCTGTCGCTCTGGCGTCGCAGGCAAAAAATGTCTCCCAGA
CACCACCACGAGGCGATTTGGAAGCCCGCCTTCCGTCCGTTTCGTTTGCG
CCACCGTCTCTGGCGCCATTGCCGGTCCTCTCCGCCTCGGAGGCCGGGAC
AGCCTCCACCGGCCCATTGACCAGGCGCCCGCCTCCCCCCCCCAGCGTGG
CTGCTGCCGCCCTCCCTCGCTTCCATTCGATCGCCGACGCCTTGGCCTGG
GCAGGAAGCCTGTCCAAGGAGGAGATCGTGGTTGAGTTGGAATTTTTGCG
CGTGAGGTACGAGGGGGGGGCAGCGGAAGCCCCGGGAAGTCACACCGAGC
TCGCGCGGCTCCTGGCCCGCTCGGTGGTGTCGGAAGGCCGGGGACAGGGA
CCGAGGGGGCGCGAGGACACCGGAGTCGGCGCCATGAGGGTGGGCGACAC
GGGAGAGGCATTGGAGCCTGTTCTGAGGGTCGAGACGTACGAAGGAGGCG
CTTCCATGGCGGAAGCGGCGGCGGGGCTCTGGGACGCGCGTTTGGAGGGA
GAGAAGGGCACAGAGCAGGCGGGCGGGTCAGAGAGGGAAGTGGAGGCGGA
TGGGATGGAGGAGGAGGGCGAACCGGTGGATCTAGCCCGGGTGAGGGAGG
ATTTGGGAGCCCTCCGGTCGCGGGCACTGCGGGCGGCGGCGTCTCTGAGG
GGCAGGGCCGACCCTCGCGGACGGCACAGGGACGGCGAGGATCACGCTGG
GGATCCATGGACACAGGATAGGGCCCCTTTTGCCCCTATCCCCCCTCCCG
GCGTCCGCCCCAAAAGCGCCGAGCCCAGCCAAGCTCCCGGACGTGCACGC
GCTGGAAGCCGCCGGCGAGGCGCGGGCCGGGCCCGACGCCGGGTATCGAG
GGAGGAGGAAGGGTGGGACGGGGGGGAGGACAGGGACCTGGCGCTGCGCG
TGTTGGAAGGGGTCTCGCGGAAGGCGGAGACGGCCTGGGAGTGGGCGACT
CGGGCGAGGGGCGTGGCTCGAGGGGCCATGATGGCGGCCACCACTGCTGG
CGTGGACTCGGACCGGCCCCGGCGTACGCCAGCGGGAAGCCGGAGGGCGG
AGAAAGCGGCGACGTTGCGTCAACGGTCACGCACGTTGCTGGGCCCGCGA
GGACGCCGGTGGTCGCGATTGACAGGGCTGATGGCGCGGGCCTGGGCCGA
GTCCGCCTGGCAGATAGTGCTGGCCTCGGCGTCGTGGGCGGGGGGGGGGG
TGCTGCCCGGGAAGTATGTGTTGGTGGGGGCGGGCGCCCTGGCGTTACTC
CTGCGGCGGGGAGTAGGAGCGTACTTGGGCACCTTGCTGGTCGTGCGGAC
GTGTTCGTCCTCGTTGCGGAACCTGATGGAGGACGAGGAGGAGGACGAAG
AGGAAGGGGAGGTCTAGGAACAAAGGGGTGGGTGGGTCGCAGAGGGCCGT
TAGGGGAGGGGACAGAGAAGCGGTTGCTCTTCCTGTGTACATACGGGACC
CGAATATGGGGTCAACGTGTATGGATGCTATTTTGTAAGCGAGGCAAAGA
CAGTGTGTAA
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Coding sequence (CDS) from alignment at CM002459.1:769926..771985-

>rna2606 ID=rna2606|Name=rna2606|organism=Nannochloropsis gaditana|type=CDS|length=1848bp|location=Sequence derived from alignment at CM002459.1:769926..771985- (Nannochloropsis gaditana)
AGGGCCGTTAGGGGAGGGGACAGAGAAGCGGTTGCTCTTCCTGTGTACAT
ACGGGACCCGAATATGGGGTCAACGTGTATGGATGCTATTTTGTAAGCGA
GGCAAAGACAGTGTGTAAATGAGAATACGCCGCGAGCCCCTCCGGCTTGC
GGCATTTCTAGTTATTGTAGTGGCTACAGGCATATGCTTGTCGCCTGTCG
CTGCTTTCCGTCCAATTTATCCCCTCCTTCAGAGTCCGCGACCATGGGGC
CTTCAAAACTCGCCTGAAACAGAGTCGTTCCTGGCACTTGTGCTGTCGCG
AGACCTTGCGACCGCAGGCTCTCGTGAAGATCCGCACTCTGTCAGACCTA
AGTACCGAATCTTCTCTTTGGTGCGACTCGCTGGCACCAAAAGTCTGGAC
TTGGAGGCCGAAACCTCGTCTGAGGCCTCCCTCCCTTTGTGGGAGGTTAT
AAGGGAACTCGGCCAACGCCAAGTGGACTTCAATGTCCTGCAGCCCAGGG
AAGAGCTTGACGCCCTCCTATACCAGGCACGTCTTGGAAAGGTAAATACG
AAAAGCGAGAGGGTGGCGTCGACTGGGACCGCGAGCTCATCAAGGCCTCT
CCCAGGCGCGACGGAACGGAAAGAGGAAGCTGTCGCTCTGGCGTCGCAGG
CAAAAAATGTCTCCCAGACACCACCACGAGGCGATTTGGAAGCCCGCCTT
CCGTCCGTTTCGTTTGCGCCACCGTCTCTGGCGCCATTGCCGGTCCTCTC
CGCCTCGGAGGCCGGGACAGCCTCCACCGGCCCATTGACCAGGCGCCCGC
CTCCCCCCCCCAGCGTGGCTGCTGCCGCCCTCCCTCGCTTCCATTCGATC
GCCGACGCCTTGGCCTGGGCAGGAAGCCTGTCCAAGGAGGAGATCGTGGT
TGAGTTGGAATTTTTGCGCGTGAGAGGGCCGTTAGGGGAGGGGACAGAGA
AGCGGTTGCTCTTCCTGTGTACATACGGGACCCGAATATGGGGTCAACGT
GTATGGATGCTATTTTGTAAGCGAGGCAAAGACAGTGTGTAAATGAGAAT
ACGCCGCGAGCCCCTCCGGCTTGCGGCATTTCTAGTTATTGTAGTGGCTA
CAGGCATATGCTTGTCGCCTGTCGCTGCTTTCCGTCCAATTTATCCCCTC
CTTCAGAGTCCGCGACCATGGGGCCTTCAAAACTCGCCTGAAACAGAGTC
GTTCCTGGCACTTGTGCTGTCGCGAGACCTTGCGACCGCAGGCTCTCGTG
AAGATCCGCACTCTGTCAGACCTAAGTACCGAATCTTCTCTTTGGTGCGA
CTCGCTGGCACCAAAAGTCTGGACTTGGAGGCCGAAACCTCGTCTGAGGC
CTCCCTCCCTTTGTGGGAGGTTATAAGGGAACTCGGCCAACGCCAAGTGG
ACTTCAATGTCCTGCAGCCCAGGGAAGAGCTTGACGCCCTCCTATACCAG
GCACGTCTTGGAAAGGTAAATACGAAAAGCGAGAGGGTGGCGTCGACTGG
GACCGCGAGCTCATCAAGGCCTCTCCCAGGCGCGACGGAACGGAAAGAGG
AAGCTGTCGCTCTGGCGTCGCAGGCAAAAAATGTCTCCCAGACACCACCA
CGAGGCGATTTGGAAGCCCGCCTTCCGTCCGTTTCGTTTGCGCCACCGTC
TCTGGCGCCATTGCCGGTCCTCTCCGCCTCGGAGGCCGGGACAGCCTCCA
CCGGCCCATTGACCAGGCGCCCGCCTCCCCCCCCCAGCGTGGCTGCTGCC
GCCCTCCCTCGCTTCCATTCGATCGCCGACGCCTTGGCCTGGGCAGGAAG
CCTGTCCAAGGAGGAGATCGTGGTTGAGTTGGAATTTTTGCGCGTGAG
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Synonyms
Publications