rna2603, rna2603 (mRNA) Nannochloropsis gaditana

Overview
Namerna2603
Unique Namerna2603
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length414
Alignment locationCM002459.1:764742..765904 +

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Properties
Property NameValue
Productcell division protein
Orig transcript idgnl|cribi|Naga_100120g1.6958.mrna
Orig protein idgnl|cribi|Naga_100120g1.6958
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:764742..765904 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100120g1gene2489Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna2603rna2603-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM28097.1cds2595Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna2603 ID=rna2603|Name=rna2603|organism=Nannochloropsis gaditana|type=mRNA|length=414bp
ATGCTTTCAGCTAGCCTTTTAAACTGCTTATCGGGTGCCGAGGCTGTTAT
GAAAGCGCCCCCGTCGCATGGAGCCATCTCGGCATGTGCAGCCGAAACAG
ATCGGATGCGTGGGCAAGACGCGTGTTTCCGATGCTGGAGATGTCGGAAT
TCCGCACAGAAATCGTCGTGCATGACGGACGACCTTACCGCCGCAGGCCG
CATAAAGGAACAGAGTGCGGGACACATTTCTTGTCCACCAGAAGTACAGG
AATTTCAAGTTGAAGCTGTCTATTATTTTTGCCACTTGAGTGATTCTGAA
GCATCGAGACGTAGTTTTCTAGTCGAGATGCAGCCTACAGAAGAAGTCGG
AATGTTGGCTCGTCCTGCGACTTGTGCCTTTGGACGCGACAGATTCCCAC
CAACCAACCTGTAA
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protein sequence of rna2603

>rna2603-protein ID=rna2603-protein|Name=rna2603|organism=Nannochloropsis gaditana|type=polypeptide|length=371bp
MSHHHPIRRKKAVTPPSPPASRIKCAFPHQARAVMKIPSSILLSTIATCS
TAAAFIVRGPHYHHSSSRTASFTRPVSTEVCLSPAASRRPGAKQSRSHAQ
SSSHNGLFMSLQPEGGGLPCQIKVMGVGGAGGNAVNRMIEEAVTGVEFWA
INTDAQALKSHQAEKKLNIGQQVTRGLGAGGIPDIGRRAAEESRADIAEA
VKGADLVFVTAGMGGGTGSGAAPVVAEVAKEMGALTIGVVTKPFQFEGRR
RLNQATMAIEELGKAVDTLIVVSNDKLLQIIEQNTPLDKAFKVADDILRN
GVVGITEIIVRPGLINVDFADVRSIMGNAGTALMGMGEGVGKTLPCEQCQ
GDRLQHHGRARHDPPGDQPGQ
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mRNA from alignment at CM002459.1:764742..765904+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna2603 ID=rna2603|Name=rna2603|organism=Nannochloropsis gaditana|type=mRNA|length=1163bp|location=Sequence derived from alignment at CM002459.1:764742..765904+ (Nannochloropsis gaditana)
ATGTCGCATCATCATCCAATccgcaggaagaaggcggtcacccctccctc tccccccgcttcACGGATCAAGTGCGCTTTCCCACATCAGGCTCGCGCAG TCATGAAAATTCCATCTTCCATTCTCTTGAGCACTATTGCAACCTGCTCG ACAGCGGCGGCCTTCATTGTCCGTGGTCCTCACTATCATCACAGCTCCTC AAGAACGGCCAGCTTTACCCGCCCTGTGAGCACAGAGGTCTGTCTCAGCC CGGCCGCAAGTCGCCGTCCAGGAGCAAAGCAGTCCCGCTCGCACGCACAA TCTTCGAGTCACAATGGACTTTTTATGTCGCTGcagcctgagggaggagg attgcCGTGCCAAATCAAGGTGATGGGTGTGGGGGGTGCTGGCGGGAACG CGGTCAATCGCatgatcgaggaggcggtcaCAGGCGTAGAATTCTGGGCG ATCAACACGGACGCACAAGCGCTCAAGTCCCATCAAGCAGAGAAGAAATT GAACATTGGTCAACAAGTGACGCGCgggctgggggcgggcggaatACCAG ACATCGGGCGCCGGGCCGCTGAAGAAAGTCGCGCGGACATCGCGGAGGCG GTGAAGGGCGCAGACCTGGTCTTTGTGACGGCTGGCATGGGCGGAGGCAC GGGATCGGGGGCCGCGCCAGTAGtggcggaggtggccaaggagatGGGCG CACTCACCATCGGGGTGGTGACGAAACCCTTCCAGTTCGAGGGCCGCCGG CGCCTGAACCAGGCGACCATGGCCATCGAGGAGCTCGGCAAGGCGGTGGA CACGCTCATCGTCGTCTCCAATGACAAGCTCCTGCAGATCATCGAACAGA ATACGCCCTTGGACAAGGCCTTCAAGGTGGCGGATGATATTCTTCGGAAC GGGGTGGTGGGTATCACCGAGATCATCGTGCGTCCGGGCCTCATCAACGT GGATTTTGCGGACGTGCGGTCGATCATGGGCAACGCCGGCACGGCATTGA TGGGAATGGGCGAGGGTGTGGGCAAGACTCGTGCTGTAgaggccgccgcg gccgccatctcGAGCCCATTATTGGAGTTCCCTGTGAACAATGCCAAGGG GATCGTCTTCAACATCATGGGCGGGCCCGACATGACCCTCCAGGAGATCA ACCTGGCCAGTAA
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Coding sequence (CDS) from alignment at CM002459.1:764742..765904+

>rna2603 ID=rna2603|Name=rna2603|organism=Nannochloropsis gaditana|type=CDS|length=2232bp|location=Sequence derived from alignment at CM002459.1:764742..765904+ (Nannochloropsis gaditana)
ATGTCGCATCATCATCCAATccgcaggaagaaggcggtcacccctccctc
tccccccgcttcACGGATCAAGTGCGCTTTCCCACATCAGGCTCGCGCAG
TCATGAAAATTCCATCTTCCATTCTCTTGAGCACTATTGCAACCTGCTCG
ACAGCGGCGGCCTTCATTGTCCGTGGTCCTCACTATCATCACAGCTCCTC
AAGAACGGCCAGCTTTACCCGCCCTGTGAGCACAGAGGTCTGTCTCAGCC
CGGCCGCAAGTCGCCGTCCAGGAGCAAAGCAGTCCCGCTCGCACGCACAA
TCTTCGAGTCACAATGGACTTTTTATGTCGCTGcagcctgagggaggagg
attgcCGTGCCAAATCAAGGTGATGGGTGTGGGGGGTGCTGGCGGGAACG
CGGTCAATCGCatgatcgaggaggcggtcaCAGGCGTAGAATTCTGGGCG
ATCAACACGGACGCACAAGCGCTCAAGTCCCATCAAGCAGAGAAGAAATT
GAACATTGGTCAACAAGTGACGCGCgggctgggggcgggcggaatACCAG
ACATCGGGCGCCGGGCCGCTGAAGAAAGTCGCGCGGACATCGCGGAGGCG
GTGAAGGGCGCAGACCTGGTCTTTGTGACGGCTGGCATGGGCGGAGGCAC
GGGATCGGGGGCCGCGCCAGTAGtggcggaggtggccaaggagatGGGCG
CACTCACCATCGGGGTGGTGACGAAACCCTTCCAGTTCGAGGGCCGCCGG
CGCCTGAACCAGGCGACCATGGCCATCGAGGAGCTCGGCAAGGCGGTGGA
CACGCTCATCGTCGTCTCCAATGACAAGCTCCTGCAGATCATCGAACAGA
ATACGCCCTTGGACAAGGCCTTCAAGGTGGCGGATGATATTCTTCGGAAC
GGGGTGGTGGGTATCACCGAGATCATCGTGCGTCCGGGCCTCATCAACGT
GGATTTTGCGGACGTGCGGTCGATCATGGGCAACGCCGGCACGGCATTGA
TGGGAATGGGCGAGGGTGTGGGCAAGACTCTTCCCTGTGAACAATGCCAA
GGGGATCGTCTTCAACATCATGGGCGGGCCCGACATGACCCTCCAGGAGA
TCAACCTGGCCAGTAAATGTCGCATCATCATCCAATccgcaggaagaagg
cggtcacccctccctctccccccgcttcACGGATCAAGTGCGCTTTCCCA
CATCAGGCTCGCGCAGTCATGAAAATTCCATCTTCCATTCTCTTGAGCAC
TATTGCAACCTGCTCGACAGCGGCGGCCTTCATTGTCCGTGGTCCTCACT
ATCATCACAGCTCCTCAAGAACGGCCAGCTTTACCCGCCCTGTGAGCACA
GAGGTCTGTCTCAGCCCGGCCGCAAGTCGCCGTCCAGGAGCAAAGCAGTC
CCGCTCGCACGCACAATCTTCGAGTCACAATGGACTTTTTATGTCGCTGc
agcctgagggaggaggattgcCGTGCCAAATCAAGGTGATGGGTGTGGGG
GGTGCTGGCGGGAACGCGGTCAATCGCatgatcgaggaggcggtcaCAGG
CGTAGAATTCTGGGCGATCAACACGGACGCACAAGCGCTCAAGTCCCATC
AAGCAGAGAAGAAATTGAACATTGGTCAACAAGTGACGCGCgggctgggg
gcgggcggaatACCAGACATCGGGCGCCGGGCCGCTGAAGAAAGTCGCGC
GGACATCGCGGAGGCGGTGAAGGGCGCAGACCTGGTCTTTGTGACGGCTG
GCATGGGCGGAGGCACGGGATCGGGGGCCGCGCCAGTAGtggcggaggtg
gccaaggagatGGGCGCACTCACCATCGGGGTGGTGACGAAACCCTTCCA
GTTCGAGGGCCGCCGGCGCCTGAACCAGGCGACCATGGCCATCGAGGAGC
TCGGCAAGGCGGTGGACACGCTCATCGTCGTCTCCAATGACAAGCTCCTG
CAGATCATCGAACAGAATACGCCCTTGGACAAGGCCTTCAAGGTGGCGGA
TGATATTCTTCGGAACGGGGTGGTGGGTATCACCGAGATCATCGTGCGTC
CGGGCCTCATCAACGTGGATTTTGCGGACGTGCGGTCGATCATGGGCAAC
GCCGGCACGGCATTGATGGGAATGGGCGAGGGTGTGGGCAAGACTCTTCC
CTGTGAACAATGCCAAGGGGATCGTCTTCAACATCATGGGCGGGCCCGAC
ATGACCCTCCAGGAGATCAACCTGGCCAGTAA
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Synonyms
Publications