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Properties
| Property Name | Value |
|---|
| Product | sodium hydrogen exchanger |
| Orig transcript id | gnl|cribi|Naga_100120g9.6955.mrna |
| Orig protein id | gnl|cribi|Naga_100120g9.6955 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002459.1 | supercontig | CM002459.1:750546..754188 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2595 ID=rna2595|Name=rna2595|organism=Nannochloropsis gaditana|type=mRNA|length=3319bp
AGTTAACCCCACGCGCACTCGCCTACGACGAGCCAGGAGGGACAGCGAAG
ACCAGATCTTGTTCCTGCACACGTCCCACTGCGGATCATAATGGGAGAAG
GCGGGGGACTCCTTAGTGCGTGTGTTTGGTTAAGATACGCACTCACGTTG
AGATGCAGGGCTCCGCTTGGTTTCTGCCGGCGCGGCGTCGGAGCTCTCTC
TTCTATTTAAGGGGAAGCAGGCGCCAAATATTGTAATCCAGGAACATCCC
TTCCGTTCACGTCTTCTCTACCAATAGAAGGCATATGGTCTGCCGGAAGG
CAGGTTGATTCAGTGGGTACCGCCCGCGCTGCGCGTCCACTGTGAAACTT
TTTTTCGTTGAGGACACGCTCGGCATAACCCCTGCATTGGCTTTACTCCA
GGCATTGCACCACAAGCTCACGGAAGGACCGCGGTACTTCCGCTACCTGT
CCACTTCATAGTGTCGATTTCATAGCTTACTTCTTTGCCCACGTCTAATC
CCTCAACATAAGTTAGACAGACGAGCCGTGTGAACGCAGGTGGCGAGACT
TCGAGCCGCTCTTTGCCAACGTGCTTTGGACGCGTTCGCGCCCTCGCGGA
GGCAAATAGAAGCGGAAGGTGAGATCACCATCGCGATACAATGACACAGT
CTTGCTCCGCTGAAAGCCTGGGAGCGGGGGCATGGCTCGTGGGGGAGATG
CAAGAGATAGTTCACGGTACGTTGGCAGGTAAAGTGGTCCTACGGAATAC
ATTCGTGACGTGTCTGTGGCTGATTTCTCCGTCACGGAGTAATCATGATA
TAATTTTGATTGAAATACAAATTCCTCTTCGAGATGGTTGGACGTTGTGG
AACGCGAGGAAGTTTTACGGGCTTCTTGCGGTTGCATTCTTGTAGAGTGC
TCTGACCTTTGTTTTTCAATATCCCCTGAATCATAACAGCTGTCGCCGCT
GCGGCTGACAGCATTCATCTTCCTCTGGGAGCTTATAATGGGCCTGTACT
TGTCTTGTTTAAGGCAATTTTGGTGGTGATGGTGGTCTATTTTGTCCTCC
TCTACCTAGAACGGCGTCACAAGCTCGTTAGCGATTGTCGCACGGGATTA
GCCTTCCTGTCTGTACTTTTAGATATGTTCGTCTTCAACAAACCGCGCAC
ATTTGCCCGTTGCTTCGCTGACGCGGTCCGCAAATGGCCTGACAAGGTAG
CGGTCCAGTTCGTAGACGACGGCCGGGAGCTGACCTTCCGGGAGATAGAC
CTCCGCGCCAACCAGGTAGCCCACCTGCTGGCGCAGCACGGACTGGGCCG
GGGCGACGTGGGTGCGATCATGATGACGAACAAACCCGAGTACATCATTG
TCGAGCTGGCCATTGCCAAGTTGGGGGCCGTGTCGGCTCTGCTGAACTTC
AACTTGAAGGGCGAGCCTCTGCGCCACAGCCTGCAGGTGGCGGGGGCCAA
GCTCCTTGTCTTCGACGACGAGCTCGCGCAGGTGGTGCTGCCCGTGGTAC
AGGCCTTCAGTCTGGCCAAGCCGGGGGAAGAGAACGGGGGCCCGGTGAAG
GGAAAGCCTGGGAGAGGAAAGGGAGCCCCGGCGGCCGCGGGCGGCACCAT
CCCTGCCCTCTTCGTGGGTCCGGGGGACGCGGCCATTCGGAAATGGGCCG
TGAGTCTGGACAAGGGTGTGGCTATGCAGCATGAGACAGTGCCGGACCCC
TCCATCCTCTCCAACCAGTCGCAGAACGAGCCCATGTCTCTGGTCTATAC
GAGTGGGACCACCGGGCTGCCCAAGGCGGCCGTTGTCAAGCACAAGCGCG
TCTTCCTCATGTCCATGAGCTTCGCCCGTCAGTTCGCCGTACGGCACTCG
GACAAGATCTACTGCACCTTGCCTCTCTACCACTCCGCCGGGGGAAACAT
CGGCCTGGGCATCATGGTCAACAAGGGCTGCACCCTCGCTTTGCGCTCCA
AGTTCTCCGCCTCCAAATTTTTCAAGGACGTGCACGACACGGGCGCGACC
GTCACGCAGTACATTGGGGAGCTTTGTCGCTACCTCCTGGCCACGCCACC
CTCGCCCTACGACCGAAAGCACAAGCTCCGGCTTGCATTTGGGAATGGGC
TGCGTCCAGATGTGTGGCCCCGGTTCGTCAGCAGGTTTAACATCCCCGAA
ATCGGCGAGTTCTACGGCGCAACGGAGGGGAACGTGGTTTTTTTCAATTA
CTGGGGCCGAGGGGAGCCGTCTGGTGCCATTGGAAAGGGTGGCTTCTTCA
ACAGGATCATCCTGGGATGGACGATCGTCAAGTTCGACCCGATCAAGGAG
GAGCCGATCAGGGACAGCATGGGCAGGTGCGTTCCTTGCGCGGACGGGGA
AGCGGGAGAGCTCTTGGCCCGCATCTCGGGGACCTCGGAATTCTCGGGGT
ACTACAAAAACAAGGAAGCGACAGAGAAGAAGGTGCTCCGGGAAGCCTTT
GGACGCAAAGGGTCGCACTGGTTCCGGTCGGGCGACTTGATCATGGTGGA
CGAACAGAGCTACATTCATTTCGTGGATCGGATCGGTGACACCTTCCGGT
GGAAAGGTGAGAATGTGTCAACGACGGAAGTGGCGTTGGCCTTGGGACGG
GTGGACTGCCTGGAGGAGGTGAATGTGGTGGGGGTGGAGGTTCCAGGGAA
GGACGGAAGGGCATGTCTGGCGGCGATCACACTGCGCGACGGGAAAGAGC
TTGACTTGGACATGACCTTGGAGGAAGCGAGAGCACACCTGCCGGCCTAC
GCTGTGCCACTTTTCCTTCGCGTCTTGAAAAAGGGGACGCAGGAAACGAC
AGGGACCTTCAAGCACATGAAGGCCAAGTACCGTACCGAGGGCATCGACG
CGGGGGCGATCGCGGATGACATGTATTGGCTGGACCCTTCGGAGGGTGTA
TACAAGCCTTATGGCAAGGCGGAGTACCAGAAAATCGTGTCTGGCAAAGC
GAAACTCTAGCCTTGGTAGCACGTCGAGGCGGCGAGTCTGTAGGCCCCGT
AAGGGCGAGTCAAAATGCTTTCTTATCAATGTATAGTGAGCTTGAACCTC
TCACACGTTTGCGTGATTGCGTCGAAATGATGGACAGGACTGACGTCCCA
TTGGAGCCCACAAGAGATGACGCGGGGCAGTGATACGATGCTGGCCGCAG
TGGATGGAAAGTTTGCCGCGGACCCAGAAAGGAATGTAGGACATGTACGA
TGCAAGAAATCGTCTATAAATTATGCAATTCTATACAGTTGTCGTATGAC
CTGATGAACTTAAGTTTTAAAACGAGATGAAAACGCGCAAAAGAAACAAA
TGCCTTTGATCGGGATGCC back to topprotein sequence of rna2595 >rna2595-protein ID=rna2595-protein|Name=rna2595|organism=Nannochloropsis gaditana|type=polypeptide|length=770bp
MHMSHRRQWQQPWWYRALFFVIALVVLTKNIDSVIAAENIAVPEVSKSGQ
DVTQPKAGEAAQRDARHAWIGHEPRHGDESREKPGDKTSDLVAEAEEEMN
EESALASTVSVDVERLQTLWRQVFENIERGKGDEDASSPQAVRTNREELQ
REFARIQQSLHMLMSHINETKEDLTQVHDALEQKETLDNLEELVRQGKMG
VNYETGELTSSVLKNLSSAFPQSGAAGSGEESISEENNNGVEISDVSDTE
TSALSMQQQEDLAAAVSKLQQAVDPAVLHLDVNLLRDVVVLSVSTALGGF
GATVMHLPPAFGFIVAGMVIGPSGLKVMTEVTEVETLAQFGSIFLLFGHG
MLYCQQYQLSPLGSTLPDTFLVGLLILSAIFFLSILAYTWCLGPSSFYQA
TLVASAVSLSSTTATAHALLANRLRETGYGKTLVELMAVQDLLMAPLLSI
PTAIKELLFQHGLLHMLPVLMSYALALLAAAVVSKRLMPRLINLRNRAEN
SLSLDLFILGLVAYCLLMSLLTEWMGLSYEAGALLAGLIVADVPQVGKAV
AVMEPLTCLFGGMYLGSLGMILSPAFLAHHAGTILLCVAVMIVIKVASVS
LGMRSLGYSLKASVLGALTMAQISELSLFLVSRAQEYKLISRQVYLMVVA
TTVVLLMLTPFSSHALKHLERVESKVGVNKSSNACWFGASLASPSRRNLH
RTSLPPSSTHPTGNLLYSHAATAGGAVAGHRRPMAGASKVGREEEPSDVT
IMHDMDKHDASRPMRIIEEA back to topmRNA from alignment at CM002459.1:750546..754188- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna2595 ID=rna2595|Name=rna2595|organism=Nannochloropsis gaditana|type=mRNA|length=3643bp|location=Sequence derived from alignment at CM002459.1:750546..754188- (Nannochloropsis gaditana)
GGCGGAGGCTGCGATGGCTGTCGTGTAGACGTGTGAGGGCTTTGGCCCAA
TTACCTGACTCAAGAGGTCGCCCACCATTTTCTTGTCTTTGCCTTTACCA
CACGCAACCAGCAAGTTCTGGTACGTGTCTGCGTTCGGCCGCACCCTGTG
CCGGAGCATCTCTTCATGAAAGCCTTGGGCCTGAGGCCAGTCGCCCGCTC
GCGCAGCGCCCAACAACAAGAGATTGTAGGTGAGACTGTTGGGTAGCACA
TGCTCTTTTCGACTCTCAAACAATTGGTTCAGTAACCCCATGGCTTTTCC
CATCTGGCCGGCCCGGACACATGTGCCGATAGCGACGTTGTAGACAAGTA
ATGTCGGTTCGGGAGGCATATGAGGAAATTTGCTCAAAGCTGCGATGGCC
TTTTCAGCGTCCGAAGCCGCAGCTGCTTTCCCGAGATCCTGTACGAGGGC
TTGAAAACTAATCTTGCTATCAGACTGGCCGGCTGAAGACGAAAAAAAAT
GAGGTGCCGGAAGGAATTGATGTCGATGTGGCCGGATGTGCTGCCTTTTG
AGCACACCCCCCGCAATTAAAGCCCCTCTGGCAGCGGTTTGTGGTAGTGA
TGAGACTAACAAGGCCGAGGCGTGGCGAAGAAGTCTCCGCGACGCGAAGG
ATTTCATCTGTGGATCAATTTAGATGACGGCCATGGTGGAAATGAGGTCA
TCGTAGTTGAGTGGTGTGCCGGGGTCAGATCGCAGTACCCGCAAGAGGAG
GCCCTGATTCTTCCGTCTGCCTAAGCATTATCGCCACGACAAAGTCTTCG
CCCTAATAATTTGTAAAAATAATGCACATCCATGGGATGACACGGCTGTC
TTGCATTCAGGAGCTTCACCAAGTTGTTCGTTTCACTTCACGTGTCGCTT
GTAGTCGCTGGTAAGACACCCCTATCGCCCGAGACCCCACGGCGACACGG
GAAAAGGACTGTGGACACGAATACCACGACCACGCGGTCATGCATGGATG
TGATGATGCGCGCAAGCATTTCATGCGCCCACAGGATGCTTTTTCCAATG
TGCTGGGATAAGCGCGTTTTGATTCTGGTGTGTTGGTCGCGGCATAAGAT
GACAAACAAATTCGTACCAATTTGCATTCTCATCCTCACTGTCTTTGACC
CATCGCCTGGTACGATAGGGGCACGCCCGGCATGCACATGTCTCATCGGA
GGCAATGGCAGCAGCCGTGGTGGTACCGTGCCCTTTTTTTCGTGATCGCT
TTGGTGGTCCTGACAAAGAACATAGACTCTGTAATTGCTGCGGAGAATAT
TGCCGTCCCAGAAGTCAGTAAATCAGGGCAGGACGTGACACAGCCCAAAG
CTGGAGAGGCTGCACAAAGAGACGCCAGACATGCATGGATAGGGCACGAG
CCGCGACATGGAGACGAAAGTAGAGAAAAACCAGGCGACAAGACCAGCGA
CCTGGTTGCGGAGGCTGAAGAGGAAATGAATGAGGAGTCGGCGCTGGCGA
GCACAGTGTCCGTGGATGTAGAGAGGCTACAGACTCTTTGGCGCCAAGTC
TTTGAAAATATTGAGCGGGGAAAGGGAGATGAAGATGCGTCGTCTCCTCA
GGCTGTGCGGACCAACCGGGAGGAATTGCAGCGGGAGTTTGCTCGTATCC
AGCAGAGTTTGCACATGCTGATGAGCCACATCAACGAAACGAAGGAAGAT
TTGACTCAGGTGCACGATGCTCTGGAGCAGAAAGAAACCCTTGACAACTT
GGAGGAGCTAGTGCGGCAGGGCAAGATGGGCGTGAATTACGAAACCGGTG
AATTGACGTCATCCGTTCTCAAAAATCTGTCAAGCGCGTTTCCGCAGTCG
GGAGCCGCGGGCAGTGGCGAGGAGAGCATTTCAGAGGAAAATAATAACGG
CGTGGAAATTAGCGACGTGTCGGACACAGAGACCTCTGCGCTGTCGATGC
AACAACAAGAGGATTTGGCGGCCGCAGTCTCCAAGCTCCAGCAGGCGGTG
GACCCCGCGGTGTTACACCTGGACGTGAACTTGTTGCGGGACGTTGTGGT
CCTGTCGGTGAGCACAGCTCTGGGTGGATTCGGGGCGACGGTCATGCATT
TGCCCCCCGCGTTCGGCTTCATCGTGGCGGGCATGGTGATAGGACCCTCG
GGCCTCAAGGTGATGACCGAGGTCACGGAGGTGGAGACGCTGGCTCAGTT
TGGATCCATATTTCTCCTGTTCGGGCACGGAATGCTGTACTGTCAGCAGT
ACCAGCTCAGTCCTTTGGGGTCCACGCTGCCCGACACTTTCTTGGTTGGT
CTGCTCATCCTCTCCGCCATATTCTTCCTGAGTATCCTCGCCTACACCTG
GTGCCTGGGCCCTTCCTCCTTCTACCAGGCCACGCTCGTCGCGTCGGCGG
TCTCGCTTTCCTCCACGACAGCCACGGCGCACGCACTGCTAGCAAATCGT
CTGCGTGAAACCGGGTACGGGAAGACGCTGGTAGAGCTTATGGCGGTGCA
AGACCTGTTGATGGCCCCTTTGCTCTCCATCCCTACGGCTATCAAGGAAC
TCCTCTTTCAGCACGGGCTGCTCCATATGCTCCCTGTTCTCATGTCTTAC
GCACTTGCCCTCTTGGCGGCGGCCGTAGTTTCCAAGCGCCTGATGCCGCG
CCTCATCAACCTCCGGAACCGGGCGGAAAACTCTCTGAGCCTCGACCTCT
TCATTTTGGGCTTGGTCGCCTACTGCCTCCTCATGTCCCTCCTGACCGAG
TGGATGGGCCTGTCCTACGAAGCGGGCGCTTTGCTGGCGGGGCTGATAGT
AGCCGACGTACCCCAAGTCGGTAAAGCGGTGGCTGTGATGGAGCCTCTGA
CCTGCCTCTTCGGCGGGATGTACCTGGGCTCCCTGGGGATGATCTTGAGC
CCCGCCTTCTTGGCCCACCACGCCGGCACCATCCTGCTGTGCGTGGCTGT
AATGATCGTGATCAAAGTCGCGTCCGTGTCGCTGGGAATGCGGTCTTTGG
GGTACTCGCTCAAGGCCTCCGTGCTCGGCGCCCTCACCATGGCGCAGATC
TCGGAGCTCTCCCTCTTCCTGGTCTCCCGGGCCCAGGAATACAAATTGAT
CTCCCGTCAAGTCTATCTAATGGTTGTGGCCACCACCGTTGTCCTTCTGA
TGCTAACCCCCTTCTCATCCCACGCCCTCAAACATCTTGAGCGCGTTGAG
AGCAAAGTGGGTGTGAATAAATCATCCAACGCCTGCTGGTTCGGGGCCTC
ACTGGCGTCACCTTCCCGTCGAAACTTACACCGTACAAGCTTGCCGCCTT
CAAGCACCCACCCGACGGGCAATCTGCTGTACTCCCATGCCGCCACTGCC
GGTGGGGCCGTCGCAGGGCATCGCCGGCCTATGGCGGGGGCCTCGAAAGT
GGGAAGAGAAGAGGAGCCAAGCGACGTGACAATCATGCATGATATGGACA
AGCATGATGCGTCACGGCCGATGCGTATCATTGAGGAGGCCTGACTTTCA
CGTCCTGAATTGCTCGAGGAGGGTTTGCATGTTTGAAGCCACACCCCGGA
AGGGTAACATGCAACGAACATAGAAAAAGCAACCACAAACCTTTGTTGTA
CAAAACAAAAACCCAAAGAATGAAAATAACGAATGCAAATATT back to topCoding sequence (CDS) from alignment at CM002459.1:750546..754188- >rna2595 ID=rna2595|Name=rna2595|organism=Nannochloropsis gaditana|type=CDS|length=2313bp|location=Sequence derived from alignment at CM002459.1:750546..754188- (Nannochloropsis gaditana)
ATGCACATGTCTCATCGGAGGCAATGGCAGCAGCCGTGGTGGTACCGTGC
CCTTTTTTTCGTGATCGCTTTGGTGGTCCTGACAAAGAACATAGACTCTG
TAATTGCTGCGGAGAATATTGCCGTCCCAGAAGTCAGTAAATCAGGGCAG
GACGTGACACAGCCCAAAGCTGGAGAGGCTGCACAAAGAGACGCCAGACA
TGCATGGATAGGGCACGAGCCGCGACATGGAGACGAAAGTAGAGAAAAAC
CAGGCGACAAGACCAGCGACCTGGTTGCGGAGGCTGAAGAGGAAATGAAT
GAGGAGTCGGCGCTGGCGAGCACAGTGTCCGTGGATGTAGAGAGGCTACA
GACTCTTTGGCGCCAAGTCTTTGAAAATATTGAGCGGGGAAAGGGAGATG
AAGATGCGTCGTCTCCTCAGGCTGTGCGGACCAACCGGGAGGAATTGCAG
CGGGAGTTTGCTCGTATCCAGCAGAGTTTGCACATGCTGATGAGCCACAT
CAACGAAACGAAGGAAGATTTGACTCAGGTGCACGATGCTCTGGAGCAGA
AAGAAACCCTTGACAACTTGGAGGAGCTAGTGCGGCAGGGCAAGATGGGC
GTGAATTACGAAACCGGTGAATTGACGTCATCCGTTCTCAAAAATCTGTC
AAGCGCGTTTCCGCAGTCGGGAGCCGCGGGCAGTGGCGAGGAGAGCATTT
CAGAGGAAAATAATAACGGCGTGGAAATTAGCGACGTGTCGGACACAGAG
ACCTCTGCGCTGTCGATGCAACAACAAGAGGATTTGGCGGCCGCAGTCTC
CAAGCTCCAGCAGGCGGTGGACCCCGCGGTGTTACACCTGGACGTGAACT
TGTTGCGGGACGTTGTGGTCCTGTCGGTGAGCACAGCTCTGGGTGGATTC
GGGGCGACGGTCATGCATTTGCCCCCCGCGTTCGGCTTCATCGTGGCGGG
CATGGTGATAGGACCCTCGGGCCTCAAGGTGATGACCGAGGTCACGGAGG
TGGAGACGCTGGCTCAGTTTGGATCCATATTTCTCCTGTTCGGGCACGGA
ATGCTGTACTGTCAGCAGTACCAGCTCAGTCCTTTGGGGTCCACGCTGCC
CGACACTTTCTTGGTTGGTCTGCTCATCCTCTCCGCCATATTCTTCCTGA
GTATCCTCGCCTACACCTGGTGCCTGGGCCCTTCCTCCTTCTACCAGGCC
ACGCTCGTCGCGTCGGCGGTCTCGCTTTCCTCCACGACAGCCACGGCGCA
CGCACTGCTAGCAAATCGTCTGCGTGAAACCGGGTACGGGAAGACGCTGG
TAGAGCTTATGGCGGTGCAAGACCTGTTGATGGCCCCTTTGCTCTCCATC
CCTACGGCTATCAAGGAACTCCTCTTTCAGCACGGGCTGCTCCATATGCT
CCCTGTTCTCATGTCTTACGCACTTGCCCTCTTGGCGGCGGCCGTAGTTT
CCAAGCGCCTGATGCCGCGCCTCATCAACCTCCGGAACCGGGCGGAAAAC
TCTCTGAGCCTCGACCTCTTCATTTTGGGCTTGGTCGCCTACTGCCTCCT
CATGTCCCTCCTGACCGAGTGGATGGGCCTGTCCTACGAAGCGGGCGCTT
TGCTGGCGGGGCTGATAGTAGCCGACGTACCCCAAGTCGGTAAAGCGGTG
GCTGTGATGGAGCCTCTGACCTGCCTCTTCGGCGGGATGTACCTGGGCTC
CCTGGGGATGATCTTGAGCCCCGCCTTCTTGGCCCACCACGCCGGCACCA
TCCTGCTGTGCGTGGCTGTAATGATCGTGATCAAAGTCGCGTCCGTGTCG
CTGGGAATGCGGTCTTTGGGGTACTCGCTCAAGGCCTCCGTGCTCGGCGC
CCTCACCATGGCGCAGATCTCGGAGCTCTCCCTCTTCCTGGTCTCCCGGG
CCCAGGAATACAAATTGATCTCCCGTCAAGTCTATCTAATGGTTGTGGCC
ACCACCGTTGTCCTTCTGATGCTAACCCCCTTCTCATCCCACGCCCTCAA
ACATCTTGAGCGCGTTGAGAGCAAAGTGGGTGTGAATAAATCATCCAACG
CCTGCTGGTTCGGGGCCTCACTGGCGTCACCTTCCCGTCGAAACTTACAC
CGTACAAGCTTGCCGCCTTCAAGCACCCACCCGACGGGCAATCTGCTGTA
CTCCCATGCCGCCACTGCCGGTGGGGCCGTCGCAGGGCATCGCCGGCCTA
TGGCGGGGGCCTCGAAAGTGGGAAGAGAAGAGGAGCCAAGCGACGTGACA
ATCATGCATGATATGGACAAGCATGATGCGTCACGGCCGATGCGTATCAT
TGAGGAGGCCTGA back to top
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