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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100120g16.6940.mrna |
| Orig protein id | gnl|cribi|Naga_100120g16.6940 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002459.1 | supercontig | CM002459.1:738574..741017 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2589 ID=rna2589|Name=rna2589|organism=Nannochloropsis gaditana|type=mRNA|length=1532bp
ACGAACAGTATACATCAGTATTTAAGCTTCTACCCAGAAGCACGAAGGTA
GCCTCGCTGGTTTCCGGGCATCGTGCCTTTTGGCGCACAAGCAGCCTGAG
GGCTGCGTTTACCTCCTTGCTACGAAGCAACTAGCCTTCAAACACCAATA
TCTTCCGCAATAATTTCCGCAACTCTATCGAATTCTGCTATGAGCTCAAT
TTTAAATCGTTTGCGCCAGAGCTTTCTTCGATATAGCGTACGACAGCGGG
ATTTACAGGAACAAGCAGACATTGAGACCGCTTTGCTGCTCACATCGTGG
TGGAAATGTATCACTATAGGACACCAAGAAGACCGTCAAACATTGCAGCA
AGAGGCAGAGCGGATGCAAAGCATGGCAGGCTACAAGCAAGTAAACATAC
TTCGAAAAAACCTAGATCAACAGATATTGCGCATGTTTTTGGCCATTGAT
GCAGCCCGCACCGTCGAGGAGACAACTAAAGCATCAAGGATGCATCATGG
CTTTGAAGAAATTAATGGTGGTACGGGCGGCTCAACTCAAGCAAGAGAGG
ACTGGCGGCCACCTAACCGGAGGCGACGGCCCCAAACAAGTTCCATCTCG
CGGCGTGGAGAAAGAGAGGACATGGAAAGTGCTCGTGAGAGCGCCCGAAG
AGGGCGTGTGTTTAAATCCTTGCGACAAGATCTAGGGTTTACACTTTGCC
ATGGACCTTCCTCAATACTATCAGCTGGAAGGGGCGTCTTCCTGGAGGGA
CGTGCTCGCATCGGATCTCTCGTTGGCATCTATCCTGGCTTGGTCTACCT
GCCTGAGCACCTCCGAAAAGCCGAAGAAGTAGCAGAGCTCTTTCCGGACC
CGGATATCTTTCTCTTTCAACGCTATGATAAAATCGTGGTTGACGGGCGG
GCGGCAGAGAAGATGCCGCATAATGAATACGCATTGGCTCACCTTTGCAA
CCATGGAAAGCCTAACGTTATGGCTGTTGCGTATGATTTTCCTCAGGATC
CACTGGGTTGGGGGGGTTTCCCTCACGAGCTGCGACCATACATACCGAAT
GCGTTCGCGCGGCCTCGCTCTTTACTAGGTAGCCCGGACCAGTCAGCCCT
GATCCAATCTGTCGTACTGGTTGCCACAACGGACCTGGAAGATGGAGAAG
AACTTTTTCTGAATTATCGACTAAATCCCAAGCACGGGAGTGAAAGCTTG
CCGCCCTGGTACGTGCCTGTGGACGCGAAGGAGGATCAGCGGCGCTGGGC
GTGAGGGGTCTAAAGTCTGAAATCCAGTGGTTATCCTAAGAGGTGTGAAG
GAAAAGGACATTTCTTAGGATATATTATTTTTGTGGGAAAAAAAAATCAA
AAGACCAAACGTAATTTGAAATGGCTCACGTAGCAATTTAAGTTAGACAT
TTTCGAGAATAGTTTCCTTCAACGCATTGTACAGTTTTTGTTGTCTCGTC
TCCCGGTGCTTCTTTGGTTAGAGATATTCAAATTTGTCCTTATCCGTGCC
TTAAGCCTCTCACTCAAGAACAGAACAAATTG back to topprotein sequence of rna2589 >rna2589-protein ID=rna2589-protein|Name=rna2589|organism=Nannochloropsis gaditana|type=polypeptide|length=686bp
MTANHDLRRADRANVQVVLLLLVVLGGAAAFLLPSKHSTITSKATRRVAP
VQATPSPAIDQHDFATVSIFSGNDEIQTLDAKVLAAANAGQPSKGTGTMP
LLATTVEEKPFDAVVKTSSGALKGFEGFAVLGALPLAFFSARTLDKKQKE
TEAEAARQMEDDAARMAREAEQARVKALEDAQKAAKREMLEAKIQRAREE
EERLRKNQEMELEREKQKQELLAAQKAAEQKVQQEKREQEQAEASRLQAK
QREAAEAAKQLKIEEEKAAQAQAEKAKAEAAAAAAAEAKAKAEEERAIAE
AKAQAEAAQKKAEEKRQEEARQAAAAQKAKEEAEAKERAEHEEAMRLAAQ
KEKEALEEKARVEAQKAKEEAARLEEEKRAAEEAKIRAQQEDEAAAKRKA
EEEAAVRKAQEIEAARQEKERQEKAAAEAKAQAEAAAKKKREQEEAEAKR
EAEEAVRKAEAERLSALKAAEDKRKQEIAAAEREKQAGIARKAAKERAAV
VRAKREKENALEKERQEKLKRAKAAALEARAEIAKDSDEKKAVPQANIRA
ASTVDPRAAQAQSDELPAPTKKDKSAATDESAERALREEKVRARAREQQK
DMSKRMVEDLTVKLSIPKLKDYLKQNKAQSPKSSAKKADFVNAVLGVAEE
KGWEVSVMELQNLSSVQAKGFGGGGGPGADSKKKKK back to topmRNA from alignment at CM002459.1:738574..741017- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna2589 ID=rna2589|Name=rna2589|organism=Nannochloropsis gaditana|type=mRNA|length=2444bp|location=Sequence derived from alignment at CM002459.1:738574..741017- (Nannochloropsis gaditana)
TCGGTAGCATCGCGCTTGACTTGAGGACCCAGCCACACACACCACACACC
TCCTCCTTGTCGTTTCCCGTCTTAAGCTTTCCTGTCTTTCTATTTGACCG
TTCACGGCGAAGAGATGGAAGAGACAGCATGAAATTTTCAATGTTACCAG
CACAATCTTTGTGGGTTTCGGTAGTCTTGTTCCATTCTGATTGCGCATTA
TTATCCGGACTATTGCCTTCAACGAACAACAACAGCAAGAGGCATCTGCA
AGGAACAGGGGCTCGATGACAGCAAATCACGATTTGAGGAGAGCAGATCG
GGCGAATGTGCAAGTGGTTCTACTATTGCTTGTTGTGCTAGGTGGAGCTG
CGGCCTTTCTTCTTCCATCTAAGCATTCGACCATCACTAGCAAGGCAACT
AGACGCGTGGCCCCTGTCCAGGCCACACCTTCTCCCGCGATCGACCAACA
CGATTTCGCGACCGTCAGTATTTTCAGTGGAAACGATGAGATCCAAACAT
TGGATGCTAAGGTATTGGCCGCCGCCAACGCGGGTCAACCTAGCAAAGGC
ACGGGCACCATGCCGCTCCTGGCGACGACAGTAGAGGAGAAGCCCTTTGA
CGCAGTAGTCAAAACATCCAGTGGCGCTCTTAAGGGATTTGAGGGGTTTG
CAGTGTTGGGAGCCTTGCCTTTGGCTTTTTTCTCTGCACGCACATTGGAC
AAAAAGCAGAAGGAGACCGAGGCGGAGGCTGCTCGACAAATGGAAGACGA
CGCGGCTCGCATGGCGCGTGAGGCCGAGCAAGCGAGGGTGAAGGCCCTTG
AGGACGCGCAAAAAGCTGCCAAGAGGGAGATGCTTGAGGCGAAGATCCAG
CGAGCCCGCGAAGAGGAGGAGCGCCTTCGCAAAAATCAAGAGATGGAATT
GGAACGAGAAAAACAGAAGCAAGAGCTCTTAGCCGCGCAGAAGGCGGCGG
AGCAGAAAGTACAACAAGAAAAGCGAGAGCAGGAGCAAGCGGAAGCATCC
CGCCTGCAAGCCAAACAACGAGAGGCGGCGGAGGCTGCCAAGCAGCTGAA
AATTGAGGAAGAAAAGGCGGCGCAGGCTCAGGCTGAGAAGGCCAAGGCAG
AGGCGGCGGCGGCGGCAGCAGCGGAGGCGAAAGCTAAGGCGGAGGAAGAG
CGGGCTATCGCTGAGGCCAAGGCTCAAGCAGAGGCAGCTCAGAAGAAGGC
TGAGGAGAAGAGACAAGAGGAGGCTCGTCAGGCGGCCGCTGCCCAAAAAG
CGAAGGAGGAGGCGGAAGCGAAAGAGAGGGCGGAGCATGAGGAGGCCATG
CGTCTGGCGGCTCAGAAGGAGAAAGAAGCTTTGGAAGAGAAGGCGCGTGT
CGAGGCACAAAAAGCAAAGGAAGAAGCGGCTCGTCTCGAGGAGGAGAAAC
GCGCTGCAGAGGAGGCAAAGATCCGGGCTCAGCAAGAGGACGAGGCGGCG
GCCAAGCGGAAAGCGGAGGAAGAGGCTGCTGTGCGCAAAGCCCAAGAAAT
AGAGGCAGCGCGCCAAGAGAAAGAGAGGCAGGAGAAAGCTGCTGCAGAAG
CCAAGGCACAAGCAGAGGCAGCAGCCAAAAAGAAGCGGGAGCAGGAGGAG
GCCGAAGCAAAACGAGAGGCAGAGGAAGCTGTGCGAAAAGCGGAGGCAGA
AAGACTGAGTGCACTCAAAGCCGCTGAAGACAAGCGTAAGCAAGAAATAG
CTGCAGCAGAGAGAGAAAAGCAAGCGGGAATTGCCCGAAAGGCAGCTAAA
GAGCGCGCCGCCGTCGTGAGGGCCAAGCGCGAGAAGGAGAACGCGCTAGA
GAAGGAGCGCCAAGAGAAGCTAAAGCGAGCGAAGGCAGCTGCACTGGAGG
CTCGAGCAGAGATTGCAAAGGACTCAGACGAGAAGAAAGCGGTACCACAA
GCAAATATCCGTGCTGCTAGCACTGTCGACCCAAGGGCCGCGCAAGCCCA
ATCCGATGAGCTTCCGGCCCCGACAAAGAAAGACAAGTCCGCTGCAACGG
ACGAAAGCGCCGAGCGTGCATTGCGGGAGGAGAAAGTTCGAGCACGGGCT
CGGGAGCAACAAAAAGATATGTCCAAACGTATGGTGGAGGATTTGACTGT
GAAACTTTCCATTCCAAAGCTGAAGGATTATTTAAAGCAAAACAAGGCTC
AGTCGCCCAAAAGCAGCGCGAAAAAAGCAGATTTTGTGAATGCCGTGCTT
GGAGTGGCAGAAGAAAAGGGGTGGGAAGTCTCCGTGATGGAGCTGCAGAA
TCTTAGCAGCGTTCAGGCTAAGGGTTTCGGCGGAGGCGGTGGACCAGGGG
CAGACTCCAAAAAGAAGAAGAAATAGATTTAGATGACCACGCATGGAGGA
ATACTGAGCCTTGTCCCAGCTAAGCTAACTTTGCACGCCAGAGTGTTTTT
AATCGAGCTTCAAAAGGAAGAAAAGCCAGCATTTTGCAAGACCA back to topCoding sequence (CDS) from alignment at CM002459.1:738574..741017- >rna2589 ID=rna2589|Name=rna2589|organism=Nannochloropsis gaditana|type=CDS|length=2061bp|location=Sequence derived from alignment at CM002459.1:738574..741017- (Nannochloropsis gaditana)
ATGACAGCAAATCACGATTTGAGGAGAGCAGATCGGGCGAATGTGCAAGT
GGTTCTACTATTGCTTGTTGTGCTAGGTGGAGCTGCGGCCTTTCTTCTTC
CATCTAAGCATTCGACCATCACTAGCAAGGCAACTAGACGCGTGGCCCCT
GTCCAGGCCACACCTTCTCCCGCGATCGACCAACACGATTTCGCGACCGT
CAGTATTTTCAGTGGAAACGATGAGATCCAAACATTGGATGCTAAGGTAT
TGGCCGCCGCCAACGCGGGTCAACCTAGCAAAGGCACGGGCACCATGCCG
CTCCTGGCGACGACAGTAGAGGAGAAGCCCTTTGACGCAGTAGTCAAAAC
ATCCAGTGGCGCTCTTAAGGGATTTGAGGGGTTTGCAGTGTTGGGAGCCT
TGCCTTTGGCTTTTTTCTCTGCACGCACATTGGACAAAAAGCAGAAGGAG
ACCGAGGCGGAGGCTGCTCGACAAATGGAAGACGACGCGGCTCGCATGGC
GCGTGAGGCCGAGCAAGCGAGGGTGAAGGCCCTTGAGGACGCGCAAAAAG
CTGCCAAGAGGGAGATGCTTGAGGCGAAGATCCAGCGAGCCCGCGAAGAG
GAGGAGCGCCTTCGCAAAAATCAAGAGATGGAATTGGAACGAGAAAAACA
GAAGCAAGAGCTCTTAGCCGCGCAGAAGGCGGCGGAGCAGAAAGTACAAC
AAGAAAAGCGAGAGCAGGAGCAAGCGGAAGCATCCCGCCTGCAAGCCAAA
CAACGAGAGGCGGCGGAGGCTGCCAAGCAGCTGAAAATTGAGGAAGAAAA
GGCGGCGCAGGCTCAGGCTGAGAAGGCCAAGGCAGAGGCGGCGGCGGCGG
CAGCAGCGGAGGCGAAAGCTAAGGCGGAGGAAGAGCGGGCTATCGCTGAG
GCCAAGGCTCAAGCAGAGGCAGCTCAGAAGAAGGCTGAGGAGAAGAGACA
AGAGGAGGCTCGTCAGGCGGCCGCTGCCCAAAAAGCGAAGGAGGAGGCGG
AAGCGAAAGAGAGGGCGGAGCATGAGGAGGCCATGCGTCTGGCGGCTCAG
AAGGAGAAAGAAGCTTTGGAAGAGAAGGCGCGTGTCGAGGCACAAAAAGC
AAAGGAAGAAGCGGCTCGTCTCGAGGAGGAGAAACGCGCTGCAGAGGAGG
CAAAGATCCGGGCTCAGCAAGAGGACGAGGCGGCGGCCAAGCGGAAAGCG
GAGGAAGAGGCTGCTGTGCGCAAAGCCCAAGAAATAGAGGCAGCGCGCCA
AGAGAAAGAGAGGCAGGAGAAAGCTGCTGCAGAAGCCAAGGCACAAGCAG
AGGCAGCAGCCAAAAAGAAGCGGGAGCAGGAGGAGGCCGAAGCAAAACGA
GAGGCAGAGGAAGCTGTGCGAAAAGCGGAGGCAGAAAGACTGAGTGCACT
CAAAGCCGCTGAAGACAAGCGTAAGCAAGAAATAGCTGCAGCAGAGAGAG
AAAAGCAAGCGGGAATTGCCCGAAAGGCAGCTAAAGAGCGCGCCGCCGTC
GTGAGGGCCAAGCGCGAGAAGGAGAACGCGCTAGAGAAGGAGCGCCAAGA
GAAGCTAAAGCGAGCGAAGGCAGCTGCACTGGAGGCTCGAGCAGAGATTG
CAAAGGACTCAGACGAGAAGAAAGCGGTACCACAAGCAAATATCCGTGCT
GCTAGCACTGTCGACCCAAGGGCCGCGCAAGCCCAATCCGATGAGCTTCC
GGCCCCGACAAAGAAAGACAAGTCCGCTGCAACGGACGAAAGCGCCGAGC
GTGCATTGCGGGAGGAGAAAGTTCGAGCACGGGCTCGGGAGCAACAAAAA
GATATGTCCAAACGTATGGTGGAGGATTTGACTGTGAAACTTTCCATTCC
AAAGCTGAAGGATTATTTAAAGCAAAACAAGGCTCAGTCGCCCAAAAGCA
GCGCGAAAAAAGCAGATTTTGTGAATGCCGTGCTTGGAGTGGCAGAAGAA
AAGGGGTGGGAAGTCTCCGTGATGGAGCTGCAGAATCTTAGCAGCGTTCA
GGCTAAGGGTTTCGGCGGAGGCGGTGGACCAGGGGCAGACTCCAAAAAGA
AGAAGAAATAG back to top
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