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Properties
Property Name | Value |
Product | hypothetical protein |
Orig transcript id | gnl|cribi|Naga_100036g21.2533.mrna |
Orig protein id | gnl|cribi|Naga_100036g21.2533 |
Gbkey | mRNA |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
CM002459.1 | supercontig | CM002459.1:676852..678210 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2563 ID=rna2563|Name=rna2563|organism=Nannochloropsis gaditana|type=mRNA|length=4276bp AAACTGGATTTTCAAGACAACTGCGTGCACATTTTCAGTATATTCATTGC CTTGCAAATTTGTTGTGGCGGTTGGACCCAAAATTGACCGACTGACCGGC TCCTGGGTAGCCAGCTCCTCCTCCCTTTTCAGTCTCGTCGTCCTTTCTTC TGTGCAGCAGTGCATACGGGGGTTCTCGGAGGACCACCGCAGCACTTTTT TGGATTGGAAGGAATGTTTTTGTGAGAAAAATAGGATCTATTCGTCAGGG CACCCTGGAAAGTGAATCACGTAGCAAAGGATGGAATACTCAGCACATCC TGGAGGAACAAATCTCCATTAAGAACCGTTGACGCTCACCGTGGCTAGTA CATCCCCTTTAAACTGTCCACTTCCAATCTTTAACACAGGATAGGGTTCA TTTGTGTTTCGCTCGCTGAAGGGAAGCAAAGACCAGTCAGATTTCTTTCA ACACTCTTCAGCCAATCTCGGGCGCGATGTCCCGGACCTTAGAAGGTGGG AAAAAGCGAGGCGGTGGCAGCGGCGGCGCTGGAAGAGGAAGTGGGGGACG TTCTCAGCAGCATAGTGGTGAAAAATTAGACCTTAAGCAGTTGATGGAGT TTGCACCACCTGGGACTACCCCCGATCAAATTCTTGAGATGAGCAAGAAG TTTAGAGAACGGGAGAAGCTGAAGGAGGAGATCTGCAAGTTGTGGGACGC TCCAGCGAGCAATCCAGAAGACGAATGGCACGATGTCGGTAGGAAGAAGA AGGAACCGATGGTCGCGCCCAGCTCTCGCGGCGGAAGGGGGGGACGTGCC AGTCCCTCGGACGCAAGACGGGGCGCTCCGGGCCAAGTGCTGGATGCCCG ATTAGCGGGATCCTCGGGTCTAGGTGCCAGAAATGGGCCCATCGTGAACG GCCGGGGAAGGAGTGCGCCTCCCGGTCATCGGGGAGGGCGGAGTGGCGGC AGGGGAGGGGGCGGCTCGGGCGTGGTGATGGTGGGGGGTCCAGGGCCTGC CTACAGCAACAGCGAGAGTCGATCGACGTCCGTGGGGCCAAAGGCCTCTT CCGGCAACGGAACCGCTGGGCCGCCTCGGACGGGTGGGCGGAAGCCCGGT CCCTCCGAAATGGCTGAGGCCCCCGGCGATGCCGCCGACCCCGCCAGGGG CACGGGGAGACCGGGGGCCTTGCCAGGCGGAGAGGCCCCTTGGGACCAGC CCGTGTCCTCAGTCTTGTCGGGCAAGCCTAGCGCTGCAGTTGGCCCCTCT TCGTCCTCCGCTGCCCCCTCGCCCGCGTCGGCTTCGACCGGCGCTGCCCC GGCCCCCACCCGCCCTACCACCACGTCAACGGCCCGCGGCGCCAAGCCCG GGCCCCATTCTGCTTCTGCCGCGAATGCGACCCCGCCGCCCGCCGCCACG GGCACATGGGCTGCTTTGCTGAAACCGAAGCCCAAGCCGCCGCCTCCCCC CCCCGCCCCCGTGCCCCCCCCTAGCAAGCAGACGCGCAAGGAGGTGGTCG AGCCTGCTCCGGTGTCAGGTCCCGCCCCGACTCGACAGGGGCCGGGAGAG CAACCACCAAAGATGCAGCATGCAAAAGAGGTGAAAGAATCACAAGCGCC ACTACACACGCAACAGACGCGGCCAACAGGCCCGCCAGACGGAGTCATAC TCAAAGAGGCGGATATATTGAAGATGAACGCCAGTGCTGGCCTGAAGAAA AGCGACGCAGACAAAGCAATTGGTCCGAATACACCGGCATCGATAGGGGC GACCGATTTGCCGCAGCGCCGTGTGCCAGCAGCAGTAGACGCTGGGGTTG GAAAGCCCGCGAGGCGGCCGGAGGCGGATAGCCTGGAGGGTGCGGCAGAG GGTCTGGGCCGGGTGAAGTTGGGGCAGTGGGATGCTTTGAACGCAGGCGG CGATGCCGGGGGCAGCAACATCCTTTTTGGTGCCTTCGGTGTCGATGATT CGTCGTCCAATAAGAAGAGTGCCGCGACCTCGGTGGCGGATATTTGGGGG GGCAAGCCCGCTACATCACCTGTGGTGGCGGCCTCAGCCAAGCCTCCTTC GGTTGCTGCTTCCCCTTCCACCAGCGCGCTTTCCCCCAAGGAGGCTGCTA TCGGAGCACCCGTCCCTTCTGCAGGTACCCACGGACCATCCTCGTCTGCC CGCCCTCCAGCGCCTCCTGGGCTCGGCGGGCCGCCCATTGTGAACGCCAC ATCGGTCAAAGCCATTGAGAGCGCCGCGCAGCGAGTGGGAGCGGGTGGAC CCAGCAAGCCGACCGGGCCGGTCGACGCGGTCAAGGGAAGGCCTGCCCAG CAATCGCCCATCAAAGGAGGGATGAGCGTCCCACCGCACTCCAGCCACCC TCACGGCGTTTCTGGGCCCCACACCGACCTTGTCGGGGGCCTTGGGGGGT ACCCTCCTTACATGAACGGAACTTATGGCTTGGCCGCGGCGGGCGGCCCA CCGGTGGGGGCGGCTGTCGGCTCGGACACGGGATTGGATAGCGCGTCGGT GGGATATCCGGGTCAGCAGACCGCCCAGCCTGGGGCGGGTGCTGGGGTGG TAAGCGGGGTGCGGGGGTCGCCCCTCGCGGCGCCTCCCTCCAGCACTGGC TCCATGCCCGCAGCGACTTCTTCGTACCATGCTCAGCAGCAAGCACAGCC GCAATCGACCTCCGGCGTTCCTCCTCACCTGTCTTCAGCCATGCAGCAGC AACCACAACAGCAACAACAGCAGCCGCAACAGCCCGCTCCCTATGGTCAG CCTCCTCCCGGCATGGCGCCCTACGGATACGGGTACTATCCTCCCTATTT TTACCAGAATCAAGCTGCGTACGCCGCCCAGGGTGCGGTTGGCGGGGGTC AATTCGCGTACGGTGGGCGAGGGGGCCTGGGGGGATATGGGAATCCAGGC GCGAGGGGCGGGCAGTATGGGATGGATCAGTTTCCCGGCCCGCAGGCATC GTCCATGCACTACGGGGGCGGGGCTATGGACTACCCCGGAGTAGGGGCTG GAGCGCCATTTAACCCCCAAGACCAATTCATAGCCGGTGGAGGCCAGAGT CACGGCGGAGCCGGCGGGGGAGGAAGCAAGACAAGTGGTTCTCACGCGAG CTCTCACTCGCATGGACATTCGCATATCGGGAGCGCGCATGACCACCTCT CTGGGGGCCCTCACGGCGGGGTACAATCCGGAAACAAGGCTCAAGGCGGT GCTTCCGGCGGCCCCTCGTTCGGTGGCGGCGGTTACGGGGGAAATCAGTC GGTGGGGTCCCACATCGGCGGAGGAGGCTACCAAGGACGCAACCCGGGGT TGGACCAAGCGGGGGCCCAAAGTGGATGGGCCGGAGGCCAGTATCAGGCG CCGGGTGGGGCGCATACCTGGATGTCGCACGGACCGCAGGGAGGCAGCCA TGCCATGGGCTTCGGTCAGCAGGCGGGGGCCATGACCAGTTCGCACTCCC ACGGGAACCCCAACATGATGCAGCAGCAGCAGCAACAGCAGCAGCAGCAG TTCCAGGGATACGGCCGCGGGGGTGCCGGAGGCATGAGCAGTGGAGCTCA GAATTGGAGCTAAAAGAGTTGTGGGCGCGGAGAGATGGGCGATGCCTCAA GAGAAGGGGGAGAGGAGGGAAAATGGGAGAGGGTAGTCAGTCAAGCAGAC AGTGTTCGAGACGTTGGTCTGGATTACAGCGCCACTTTATTTGTCTATGG TAATTGGTAGCGGAGGGAGTCGACGCTCTGCCTTTGTGGTCTCTTAAGTG TGTCTTTTATCCTCGGACGTAGCTGTTCAGATGACTGCCTTCTCAGACCT TAGATGGGGGTTGAAGGCAAGGATGCGTCCCGTCAAATAGCCTTTCCTTG GCGGAGGAGAGGCATTGAAGATAGGGCGTGTATTCACGTGGAAGACGCTA CGACTCGAAGAGGCAGGGGTGGTAGCGGTGCTGTGCTGGTAGAAGAGAGG AAAAGAGGAGGGCAAAGGAAGAGACACGAGGGATTCGGGGCTGTATTAAG ACTCAATGTCGGGCGGGTGCATTTCTCTGAAAATACCACTGAGATGTCGC TTCCGGCCTCGGTACATTGCTTTCCCCTTGCTGTGCAACCCAATGCCTCG GAGATAGGGTTGGCTGCATCATAGCCGAGGCGGAAGCGAGGGAGGGGGGG ATCTTGTCTCACTCAGAGGCAGTATTGTGAAGAGTTTTTCGTCTCTCGAC TCCTTAACTATATCTTTTAGAGCTTTTATCCTTGGTCCAGAAATAAAGAA GAAAGACACGAGAAAGTAAAAGAGGG back to topprotein sequence of rna2563 >rna2563-protein ID=rna2563-protein|Name=rna2563|organism=Nannochloropsis gaditana|type=polypeptide|length=283bp MNNYLLPLVLAFLCHYSFAFIKPFAPKIRSQRLTSLQPDGNAHFRRSRVV VSMGKGRKAEKKRKSAPPARREVASPKAAPGSQTQDKEPESFGILGSDGG MGPINSQVGVGFGTPKASSPGKLSPVDVDDAYERALSKVKGQDRLSSSPL RGGGGVSKGLGEPSADGKVPVRNIGLLDVIPESVQSSLELVLIGLLALNL VVIIGIGTGFAVQALPTSNLELPESLVALSKKVEPLIEKSEFYFTPSLGV FFLLSTLLGSFKISQLSRGGTTYVEKKDLKIRK back to topmRNA from alignment at CM002459.1:676852..678210- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna2563 ID=rna2563|Name=rna2563|organism=Nannochloropsis gaditana|type=mRNA|length=1359bp|location=Sequence derived from alignment at CM002459.1:676852..678210- (Nannochloropsis gaditana) CGGTCCTCGTGTCGGTCCACAAGACCCGCGACCTCCCCCCGCCCTTCCCC
GTGCCAGCCAGCCGCAAACACCAAAACCTTGAAAGAAAAGGTGGAAGGCA
AGGAGGACATGTCTGACTGTTCTGGAATCATGATCCTTTTCCCCATGCAC
GGGCAGGTGCCAGGTATCAAATTGTGACCAGCATGAATAACTACCTCCTG
CCCCTGGTCCTGGCCTTCCTCTGCCACTATAGCTTCGCCTTCATCAAGCC
CTTCGCACCGAAAATTCGGTCCCAACGTTTGACATCTCTTCAACCTGATG
GAAATGCTCATTTTCGGAGATCGAGGGTTGTGGTGAGTATGGGCAAAGGC
CGTAAAGCAGAGAAGAAACGTAAATCGGCACCTCCTGCACGCCGGGAGGT
CGCCAGCCCCAAAGCTGCACCCGGAAGTCAAACTCAGGACAAAGAGCCTG
AGTCCTTCGGCATCCTTGGATCTGATGGTGGAATGGGTCCAATTAATAGT
CAAGTAGGCGTGGGCTTTGGGACCCCAAAGGCCTCTTCGCCTGGGAAGCT
CTCGCCCGTCGACGTCGACGACGCCTACGAACGGGCTCTCAGCAAGGTCA
AAGGCCAGGACCGTTTGTCTTCTTCTCCATTAAGAGGTGGGGGGGGTGTC
TCTAAAGGTCTAGGGGAGCCTTCCGCTGATGGAAAGGTGCCGGTGCGCAA
CATCGGGCTCTTGGACGTGATACCTGAGTCAGTGCAAAGCAGTCTCGAGC
TGGTTCTTATCGGACTTCTGGCCTTGAATTTGGTAGTCATCATTGGCATT
GGAACTGGATTCGCGGTACAAGCACTACCCACTTCGAACCTTGAGTTGCC
GGAGAGCCTTGTGGCATTGTCCAAGAAGGTGGAGCCGCTCATCGAAAAAT
CTGAGTTTTACTTTACGCCCAGCTTGGGAGTGTTCTTCCTGCTTTCCACG
CTTCTGGGGTCGTTCAAAATTTCGCAGCTGTCTCGCGGGGGCACAACCTA
TGTTGAGAAGAAGGATTTGAAGATAAGAAAATAGGCAACAGCACGACAAA
TGATTCTCTTTGTCGGGACCGTCGGCCTACAGGAGCTGTCTCGGCTTCTG
CGATGGATTGGCTCCCTGTCTTCCATCCGTGTATTCCATCTGTTTTCCTC
TATCCTTTTGTACAGCTTGCGCTAGAAAATGTCGCGCCTGACACAGATGG
CGCATAAGTGCGCCGACAAGGCCGCCCGAAAGGACGAAGATATCGATCGA
GTCAAGAAACGCTATCAAAGCCTGGATCCCTCTTTTACTTTCTCGTGTCT
TTCTTCTTTATTTCTGGACCAAGGATAAAAGCTCTAAAAGATATAGTTAA
GGAGTCGAG back to topCoding sequence (CDS) from alignment at CM002459.1:676852..678210- >rna2563 ID=rna2563|Name=rna2563|organism=Nannochloropsis gaditana|type=CDS|length=852bp|location=Sequence derived from alignment at CM002459.1:676852..678210- (Nannochloropsis gaditana) ATGAATAACTACCTCCTGCCCCTGGTCCTGGCCTTCCTCTGCCACTATAG CTTCGCCTTCATCAAGCCCTTCGCACCGAAAATTCGGTCCCAACGTTTGA CATCTCTTCAACCTGATGGAAATGCTCATTTTCGGAGATCGAGGGTTGTG GTGAGTATGGGCAAAGGCCGTAAAGCAGAGAAGAAACGTAAATCGGCACC TCCTGCACGCCGGGAGGTCGCCAGCCCCAAAGCTGCACCCGGAAGTCAAA CTCAGGACAAAGAGCCTGAGTCCTTCGGCATCCTTGGATCTGATGGTGGA ATGGGTCCAATTAATAGTCAAGTAGGCGTGGGCTTTGGGACCCCAAAGGC CTCTTCGCCTGGGAAGCTCTCGCCCGTCGACGTCGACGACGCCTACGAAC GGGCTCTCAGCAAGGTCAAAGGCCAGGACCGTTTGTCTTCTTCTCCATTA AGAGGTGGGGGGGGTGTCTCTAAAGGTCTAGGGGAGCCTTCCGCTGATGG AAAGGTGCCGGTGCGCAACATCGGGCTCTTGGACGTGATACCTGAGTCAG TGCAAAGCAGTCTCGAGCTGGTTCTTATCGGACTTCTGGCCTTGAATTTG GTAGTCATCATTGGCATTGGAACTGGATTCGCGGTACAAGCACTACCCAC TTCGAACCTTGAGTTGCCGGAGAGCCTTGTGGCATTGTCCAAGAAGGTGG AGCCGCTCATCGAAAAATCTGAGTTTTACTTTACGCCCAGCTTGGGAGTG TTCTTCCTGCTTTCCACGCTTCTGGGGTCGTTCAAAATTTCGCAGCTGTC TCGCGGGGGCACAACCTATGTTGAGAAGAAGGATTTGAAGATAAGAAAAT AG back to top
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