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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100036g35.2536.mrna |
| Orig protein id | gnl|cribi|Naga_100036g35.2536 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002459.1 | supercontig | CM002459.1:640173..642534 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2551 ID=rna2551|Name=rna2551|organism=Nannochloropsis gaditana|type=mRNA|length=1816bp
AAAGTCAAATCGATGCCACATCATACTTCATAAGCGAAAGTCGCTCGTGA
GCGCAAAGCTAACCCAGCCAAGCTTTCGCTTGTTTTTCGGAATGAGGACG
AAAAGCAATCGTGGCATGCTTACTGCCAAGGGCCCTTCCCGGGGGAGGGG
AGGTGGAGCTCCATGGAGGCATGCCTTGCGATCTCTGACTACATATTTGC
TTAGTCTTTTTCCAATCTCTGAAACCTATGTCAAGCATTCGTCGTGACAG
TGGCCTTGAGACTTTTTTTTCGTGGAGCATCATTCGAGGAGATCCATGGT
GGTGGACAGTCATCCGCGCTTGCGGCTCGTGAGGGCCAGCGAAGTAGATG
ACCTGGCCAAACTCAACGAGCCCGTCGAGGCTCTTGCCCGGACACAAGCA
ATGGAGATCATCGAAGACATCAAGGCGAACGGCAAGGTGGCTCTGCTCCA
GCAAGCCGTGCGTTTGGGAGATATCAAGTCCACTGAGGAGCCCATTCTGC
TTGGGAAGCCAGAGTTGGAGAAAGCATGGATGTCTCTGACACCCGGGCAG
CGGGAGATGCTACAGCGCACGAGGGACAGGATCGAGGCATTTGCGACTGC
TCAGCGAGGCGCGATAAATGACGTATCCATGACAATACCTGGGGGCTCTG
CAGGTCATACAATAGCACCGATGGGCGTGGCGGGATGCTATGCCCCGGGA
GGACGATATCCGTTGCCGTCCTCAGTACTAATGACGGCTGTGACAGCGCG
GGCGGCGGGCGTGGGCAAGGTATGGGTGGCTTCTCCCCGACCCTCGGCGG
TCACATTGGGGGCTGCTTTTATCGCGCAGGCGGACGCTTTCCTAGCGGTA
GGCGGGGCGCAAGCAGTGGCAGCGCTGGCGTATGGCGTGGGGGGGGTGGA
CGCGTGCGACATCATCGTAGGCCCCGGCAACAAATGGGTGACAGCCGCCA
AGTCCCTCATCTCCGGCGTCTGTGCCATCGACATGCTCGCGGGCCCATCG
GAAGTTCTTGTTCTCGCGGATGCAAATGCGGACGTCCAGACCGTGGCCGC
GGACTTACTTGCGCAAGCAGAGCATGACGTGGAGGCTCGTCCCATCCTGG
TGGCCACATCCCGCCACGTGATCGACAGCGTGAACGAGGCCTTGGGCGAG
CAGCTTGCCGTCCTGCCCACGGGCGAGACTGCTCGGGCTGCCGTGCTGAA
GGGCTTTGCCGTCGAAGTCAGCAGCATCGAGGAGGGCATCCAGATCTCGG
ACAAAATCGCACCGGAGCACCTGGAGATCCAGACGGCGGAGGCCTCGGAC
GTCGCTTTCCGATGCAGGAACTACGGAGCCGTTTTCATCGGCCATGGCGC
GGCGGAGGTCTTGGGTGACTATGGTGCGGGACCTAACCACGTTTTACCGA
CGGGCGGTACGGCAAAGTACACGGGAGGGCTCAGCGTTTTCACTTTCTTG
CGGATACGGACCTGGATGCAGATGGAGGACGCGCTCGGGGGCCAGGTTGT
GGTGAAGGACGCCGTGGAGCTTGCCCGCTTGGAGGGACTGGAGGGGCATG
CCCGGGCTGCAGAGAAGCGTCTTCTGCCCGCTTAGGGTTGAGAAGGTATT
TTACTTCTTTGCTTTTGTAGGGCCAGAGAGGGGGCTAGGAGGTTTGCTTG
ACGGTCGAGACTCGCCGGCTGAGGAGGGAGAAAGGTAAAGAATTACGTGT
TGCAAAAGTCGTCTTTGAGCAGACATCTATGGGGCAAACATGACTATGAT
GTCTTGAGTAGGACAACCTTTTGAGGGTAAAGCGTCCTGACAGAAGCCAT
GACCCCACCTCATCCG back to topprotein sequence of rna2551 >rna2551-protein ID=rna2551-protein|Name=rna2551|organism=Nannochloropsis gaditana|type=polypeptide|length=441bp
MDGTDEDDLDDDGLLTLDVIATAVDEHRRRNSSGYAATLDDAHGGDKEKG
NETQDRPWILQDGDGAPNGMHSGAKSGRGNESYSGSDDEASLKDDYEGSY
EVVPLLDLERLKWTNEGGIWVPCRTLLQMEAALENLGDHELEEGEVWVRY
FPTRNTDHKQHMRKKREDLMPFNYQEDGGAARWSSHFKNLGPRASVARKK
RRLTVKKTSAYTYKNWSIAMDFAEKTLEASLAAQRKKNEHMERERRLAAT
LEVISSDDGEGEPSGAMAGSEWVPGGASARDSLASDLEKNETVHGRRMGR
GNVTLRVGDRIEYKLRTSPAGQFNSAVITGVEPRKTCPLELNVMDVLDLD
VLVKKTAKYLPTKGVWRSVPETQRKLMPLGQHHLPHGGQADAQLLELLGP
SEGDLLKALVKKESQSLRDEAQRFSTKQEDEEGEERGSISV back to topmRNA from alignment at CM002459.1:640173..642534+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2551 ID=rna2551|Name=rna2551|organism=Nannochloropsis gaditana|type=mRNA|length=2362bp|location=Sequence derived from alignment at CM002459.1:640173..642534+ (Nannochloropsis gaditana)
TTGGCGCGTTTCTTTCCGCAGGCTGAAGACAAACACGGTCGCCGTTGGGG
CGCTTGTGGCCCTCCGGGAGCtcacgacgaggaggactgACGAGTGGAGG
GCTCGGAAGTTAATTTGCGCTCAGGTGTCTATATGGACGGCACTGATGAA
GATGACCTTGATGATGACGGTTTGCTGACATTAGATGTGATCGCGACAGC
GGTGGATGAGCATCGACGCCGCAACTCTTCCGGCTATGCGGCCACTTTGG
ACGATGCGCACGGAGGAGATAAAGAGAAGGGCAACGAGACCCAAGACAGG
CCCTGGATCCTTCAGGACGGAGACGGAGCACCCAATGGCATGCACTCGGG
AGCGAAGTCAGGCCGCGGGAACGAAAGTTACAGCGGCAGTGACGACGAGG
CGTCACTAAAAGACGACTACGAGGGAAGCTACGAAGTGGTGCCATTGTTA
GACCTGGAGCGTTTGAAATGGACCAATGAGGGCGGAATTTGGGTTCCTTG
CCGTACGTTGTTACAAATGGAGGCCGCGCTTGAGAATCTGGGCGATCatg
agttggaggagggtgaggttTGGGTGCGCTACTTTCCCACGCGGAACACA
GACCACAAGTAAGTATGATGCAGGGGGCTGAACAAACGGACTAATCATTG
AATGGCCTTGATTCTTACTTTGAAAATATGCTGTTGATTGAATGAGCCGA
GCTAGCAGTCTTGTTTAAATTGGTGATCTCCCACCCATACAGGCAGCATA
TgcgaaagaagagggaggatctGATGCCTTTCAATTAtcaagaggatgga
ggagccgCCAGATGGAGCAGTCATTTCAAGAATTTGGGCCCTCGCGCCTC
TGTCGCCAGAAAGAAGCGACGCCTGACAGTCAAGAAGACATCAGCGTATA
CATACAAGAATTGGAGCATTGCCATGGACTTCGCTGAGAAGGTATGGGGA
GTGACAGTATGGATCCGTGCCGTAGCATTTAATATTGGTTCGATGCGGTC
TCTTTCAAACTCTATCGTTTGCTCTTCTTACTTTTCTGCGGGTATGCACG
TACAGACGCTTGAGGCATCACTTGCGGCGCAGCGGAAAAAAAACGAGCAC
ATGGAAAGAGAGCGACGATTGGCAGCCACCTTGGAGGTGATTTCCTCCGa
tgacggggaaggagagccgAGCGGGGCAATGGCGGGCTCCGAATGGGTTC
CAGGGGGGGCAAGCGCGAGGGACAGTCTGGCCTCAGACCTCGAGAAGAAC
GAGACAGTGCATGGGCGGCGCATGGGTCGCGGCAACGTCACTTTGCGTGT
GGGAGACCGCATCGAGTACAAACTGCGCACCAGCCCGGCGGGCCAGTTCA
ATTCCGCCGTCATCACCGGCGTGGAGCCCAGGAAGACGTGCCCGCTGGAA
CTGAACGTGATGGACGTCCTAGACCTAGACGTCCTGGTGAAGAAGACAGC
CAAGTATCTGCCCACGAAGGGTGTGTGGCGTAGTGTGCCCGAGACGCAGC
GAAAGCTCATGCCTTTGGGGCAACACCATTTGCCTCACGGAGGTCAGGCG
GACGCGCAGCTATTAGAGCTCCTGGGCCCTTCGGAAGGGGACTTATTGAA
GGCCCTGGTGAAAAAGGAAAGTCAGAGCCTGCGAGATGAAGCCCAGCGCT
TTTCAACGAAgcaggaagatgaagagggcgaggaaagaggatcGATTTCA
GTTTGAACTTGATATGGTGGAAGTCCCAGACAGTTGTGGAGGCCACCAAA
GGTGGACAAAGTGCTACTCAGGCGATTGGTGCTGTTTTGTCCATTAAATT
TAGGAATTCGATGATGCAAGGatcggaaggaggaagccgtaGGAAGTGCC
GAGGCTGATAGGCCggtaaggggggggaaatcaTGTGCAGGCCTTCGCAG
GTGACAAATGTCTTTTGAATTAAAGAAAGCAAAGTAATTATCGAAATTAA
AAGTAAAAAGACGGTTCAAGCACGAAACGACATCCAGTACTTTGCAAGAG
ATGTAAGAGGGGAAAAACTGGGTGAACAagcaggtggaagaagagcatgt
GTTGGGAAGGGACTGTGTTCAATACATACTCACAAGGCTGGATTAGAAAG
TATAGTTAAAGTCATAAGAACGGGTGTACACTTTCTGTAAGAGTGTTCCA
AAAAGGAATTGCCAAGAATGAGGTATGCGGCGCTCGGAGGGTCCGATAAA
GACCTTCGTCCACCACACTGGACATGGGAGCTGCCGCCAACAATCTCGAC
CCGTCACCCTCTCAGCAACTTGAGGCTTGTTGGAATAGAGACTTGTCCCA
CCCGAAATTGATGATTTGCCTTCAATTGTCCGAAACCAATACAAACAAGA
AACTAGTTTTGT back to topCoding sequence (CDS) from alignment at CM002459.1:640173..642534+ >rna2551 ID=rna2551|Name=rna2551|organism=Nannochloropsis gaditana|type=CDS|length=3978bp|location=Sequence derived from alignment at CM002459.1:640173..642534+ (Nannochloropsis gaditana)
ATGGACGGCACTGATGAAGATGACCTTGATGATGACGGTTTGCTGACATT
AGATGTGATCGCGACAGCGGTGGATGAGCATCGACGCCGCAACTCTTCCG
GCTATGCGGCCACTTTGGACGATGCGCACGGAGGAGATAAAGAGAAGGGC
AACGAGACCCAAGACAGGCCCTGGATCCTTCAGGACGGAGACGGAGCACC
CAATGGCATGCACTCGGGAGCGAAGTCAGGCCGCGGGAACGAAAGTTACA
GCGGCAGTGACGACGAGGCGTCACTAAAAGACGACTACGAGGGAAGCTAC
GAAGTGGTGCCATTGTTAGACCTGGAGCGTTTGAAATGGACCAATGAGGG
CGGAATTTGGGTTCCTTGCCGTACGTTGTTACAAATGGAGGCCGCGCTTG
AGAATCTGGGCGATCatgagttggaggagggtgaggttTGGGTGCGCTAC
TTTCCCACGCGGAACACAGACCACAAGCAGCATATgcgaaagaagaggga
ggatctGATGCCTTTCAATTAtcaagaggatggaggagccgCCAGATGGA
GCAGTCATTTCAAGAATTTGGGCCCTCGCGCCTCTGTCGCCAGAAAGAAG
CGACGCCTGACAGTCAAGAAGACATCAGCGTATACATACAAGAATTGGAG
CATTGCCATGGACTTCGCTGAGAAGACGCTTGAGGCATCACTTGCGGCGC
AGCGGAAAAAAAACGAGCACATGGAAAGAGAGCGACGATTGGCAGCCACC
TTGGAGGTGATTTCCTCCGatgacggggaaggagagccgAGCGGGGCAAT
GGCGGGCTCCGAATGGGTTCCAGGGGGGGCAAGCGCGAGGGACAGTCTGG
CCTCAGACCTCGAGAAGAACGAGACAGTGCATGGGCGGCGCATGGGTCGC
GGCAACGTCACTTTGCGTGTGGGAGACCGCATCGAGTACAAACTGCGCAC
CAGCCCGGCGGGCCAGTTCAATTCCGCCGTCATCACCGGCGTGGAGCCCA
GGAAGACGTGCCCGCTGGAACTGAACGTGATGGACGTCCTAGACCTAGAC
GTCCTGGTGAAGAAGACAGCCAAGTATCTGCCCACGAAGGGTGTGTGGCG
TAGTGTGCCCGAGACGCAGCGAAAGCTCATGCCTTTGGGGCAACACCATT
TGCCTCACGGAGGTCAGGCGGACGCGCAGCTATTAGAGCTCCTGGGCCCT
TCGGAAGGGGACTTATTGAAGGCCCTGGTGAAAAAGGAAAGTCAGAGCCT
GCGAGATGAAGCCCAGCGCTTTTCAACGAAgcaggaagatgaagagggcg
aggaaagaggatcGATTTCAGTTTGAATGGACGGCACTGATGAAGATGAC
CTTGATGATGACGGTTTGCTGACATTAGATGTGATCGCGACAGCGGTGGA
TGAGCATCGACGCCGCAACTCTTCCGGCTATGCGGCCACTTTGGACGATG
CGCACGGAGGAGATAAAGAGAAGGGCAACGAGACCCAAGACAGGCCCTGG
ATCCTTCAGGACGGAGACGGAGCACCCAATGGCATGCACTCGGGAGCGAA
GTCAGGCCGCGGGAACGAAAGTTACAGCGGCAGTGACGACGAGGCGTCAC
TAAAAGACGACTACGAGGGAAGCTACGAAGTGGTGCCATTGTTAGACCTG
GAGCGTTTGAAATGGACCAATGAGGGCGGAATTTGGGTTCCTTGCCGTAC
GTTGTTACAAATGGAGGCCGCGCTTGAGAATCTGGGCGATCatgagttgg
aggagggtgaggttTGGGTGCGCTACTTTCCCACGCGGAACACAGACCAC
AAGCAGCATATgcgaaagaagagggaggatctGATGCCTTTCAATTAtca
agaggatggaggagccgCCAGATGGAGCAGTCATTTCAAGAATTTGGGCC
CTCGCGCCTCTGTCGCCAGAAAGAAGCGACGCCTGACAGTCAAGAAGACA
TCAGCGTATACATACAAGAATTGGAGCATTGCCATGGACTTCGCTGAGAA
GACGCTTGAGGCATCACTTGCGGCGCAGCGGAAAAAAAACGAGCACATGG
AAAGAGAGCGACGATTGGCAGCCACCTTGGAGGTGATTTCCTCCGatgac
ggggaaggagagccgAGCGGGGCAATGGCGGGCTCCGAATGGGTTCCAGG
GGGGGCAAGCGCGAGGGACAGTCTGGCCTCAGACCTCGAGAAGAACGAGA
CAGTGCATGGGCGGCGCATGGGTCGCGGCAACGTCACTTTGCGTGTGGGA
GACCGCATCGAGTACAAACTGCGCACCAGCCCGGCGGGCCAGTTCAATTC
CGCCGTCATCACCGGCGTGGAGCCCAGGAAGACGTGCCCGCTGGAACTGA
ACGTGATGGACGTCCTAGACCTAGACGTCCTGGTGAAGAAGACAGCCAAG
TATCTGCCCACGAAGGGTGTGTGGCGTAGTGTGCCCGAGACGCAGCGAAA
GCTCATGCCTTTGGGGCAACACCATTTGCCTCACGGAGGTCAGGCGGACG
CGCAGCTATTAGAGCTCCTGGGCCCTTCGGAAGGGGACTTATTGAAGGCC
CTGGTGAAAAAGGAAAGTCAGAGCCTGCGAGATGAAGCCCAGCGCTTTTC
AACGAAgcaggaagatgaagagggcgaggaaagaggatcGATTTCAGTTT
GAATGGACGGCACTGATGAAGATGACCTTGATGATGACGGTTTGCTGACA
TTAGATGTGATCGCGACAGCGGTGGATGAGCATCGACGCCGCAACTCTTC
CGGCTATGCGGCCACTTTGGACGATGCGCACGGAGGAGATAAAGAGAAGG
GCAACGAGACCCAAGACAGGCCCTGGATCCTTCAGGACGGAGACGGAGCA
CCCAATGGCATGCACTCGGGAGCGAAGTCAGGCCGCGGGAACGAAAGTTA
CAGCGGCAGTGACGACGAGGCGTCACTAAAAGACGACTACGAGGGAAGCT
ACGAAGTGGTGCCATTGTTAGACCTGGAGCGTTTGAAATGGACCAATGAG
GGCGGAATTTGGGTTCCTTGCCGTACGTTGTTACAAATGGAGGCCGCGCT
TGAGAATCTGGGCGATCatgagttggaggagggtgaggttTGGGTGCGCT
ACTTTCCCACGCGGAACACAGACCACAAGCAGCATATgcgaaagaagagg
gaggatctGATGCCTTTCAATTAtcaagaggatggaggagccgCCAGATG
GAGCAGTCATTTCAAGAATTTGGGCCCTCGCGCCTCTGTCGCCAGAAAGA
AGCGACGCCTGACAGTCAAGAAGACATCAGCGTATACATACAAGAATTGG
AGCATTGCCATGGACTTCGCTGAGAAGACGCTTGAGGCATCACTTGCGGC
GCAGCGGAAAAAAAACGAGCACATGGAAAGAGAGCGACGATTGGCAGCCA
CCTTGGAGGTGATTTCCTCCGatgacggggaaggagagccgAGCGGGGCA
ATGGCGGGCTCCGAATGGGTTCCAGGGGGGGCAAGCGCGAGGGACAGTCT
GGCCTCAGACCTCGAGAAGAACGAGACAGTGCATGGGCGGCGCATGGGTC
GCGGCAACGTCACTTTGCGTGTGGGAGACCGCATCGAGTACAAACTGCGC
ACCAGCCCGGCGGGCCAGTTCAATTCCGCCGTCATCACCGGCGTGGAGCC
CAGGAAGACGTGCCCGCTGGAACTGAACGTGATGGACGTCCTAGACCTAG
ACGTCCTGGTGAAGAAGACAGCCAAGTATCTGCCCACGAAGGGTGTGTGG
CGTAGTGTGCCCGAGACGCAGCGAAAGCTCATGCCTTTGGGGCAACACCA
TTTGCCTCACGGAGGTCAGGCGGACGCGCAGCTATTAGAGCTCCTGGGCC
CTTCGGAAGGGGACTTATTGAAGGCCCTGGTGAAAAAGGAAAGTCAGAGC
CTGCGAGATGAAGCCCAGCGCTTTTCAACGAAgcaggaagatgaagaggg
cgaggaaagaggatcGATTTCAGTTTGA back to top
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