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Properties
| Property Name | Value |
|---|
| Product | histidinol dehydrogenase |
| Orig transcript id | gnl|cribi|Naga_100036g36.2521.mrna |
| Orig protein id | gnl|cribi|Naga_100036g36.2521 |
| Gene | HDH |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002459.1 | supercontig | CM002459.1:638276..640172 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2550 ID=rna2550|Name=rna2550|organism=Nannochloropsis gaditana|type=mRNA|length=3198bp
ATGCTCCGCATCTCTCATCGTGTGCTACAAGCGCCGCCGCCATGGAGTAC
TTTCAAATTGGCCCCACGACTGCCGCCTCCACTTGCATGGACTTCGAACT
ATAGGAAGGGTTTTTCGACGATATCAACGGCCACTTGCGATCCAAACCTT
ATCCGGAACGTCGCGATTATTGCACATATTGACCATGGCAAAACCACAAT
TTGCGATCGACTGATGGGCAGTAGCGCCGTGACAGTGGATCGAGTCATGG
ACAGTATGTCTTTGGAAAAGCAACGCGGGATTACGATTATGAGCAAGTAC
ACGCGAGTTGATTTCGAAGGTCACGTACTGAATGTGGTGGACACCCCTGG
CCACGCTGATTTTGGTGGGGAGGTAGAGCGCGTTCTGGGCATGTGCAGCG
GCTGTTGCTTGATAGTATGCGGAACTGAGGGGCCCATGGCTCAGAGCAAA
TACGTCTTGTCTAAAGCTATTGAGCAGAATCTCAAGCCCATCGTGGTCAT
CAATAAAGTCGATCGTGAAGGAAGCCGGCCACACGAGGTGGAGAGCGAGG
TCCTTGATTTGTTCATCTCGCTGGGAGCCCCTGACGAGCTTCTCGACTAC
CCCGTCCTATTCGCCAGCGCACGGGAGGGATGGGCGGTGCAAGATATGGA
CGACACGGACCACTCGCGAGGCATGGCCCCACTGCTTGAAGCGATCGTCG
CGACCGTACCTCCGCCCTGTGCCCCGGAGGCCCTCTCGGAGCCCTTCAGG
TTTGCGGTGAACAGCCTGCAGACAGACAGCTACGTGGGTCGTGTCTGCCT
AGGCAAGGTACACACGGGCCAGGTCAAGGTTGGCGACTCGATCAAGGCGC
TCTCCAGGGAGGATGACGGCGGGGTCCTGCAAGAGGGCAAGGTAACCAAG
ATATTCTGCCAGCGCGGCATGGAGAAGCTGGCAGTGGATGCAGCATATGC
CGGAGACATCCTGTGGCTGGCGGGGGTGGAGGCCAATGTTGCCGACACCA
TAGCGGCCCCAGAAGTGGTCGTCCCACTGCAGACGCAGAAGATGGACCCG
CCCACGTTGGCCATTACGTTCTCCGCCAATGACTCCCCTCTGGCTGGGCA
GGAGGGGAAGTATGTCACGGGCTCTCAAGTGATCGGCCGCCTTCATAAGG
AGGTAGAGAACAACGTCTCGATCACTCTTGTCCCGTCGTCAGAGCCCGAG
TCCATCGAGGTGCACGGGCGGGGGGAACTGCAGCTGGGGATTATTATCGA
AACAATGCGTCGAGAAGGATTCGAGCTTTGCGTGTCGCCCCCTAAAGTAC
TGACCAAAGTATGTCCGAGCACGGGCAAAACGTTGGAGCCTGTGGAGGAG
GTTACGGTCGATGTGGATCAGGAGCTTAGTGGTATCGTGGTGGAGAAGCT
AAGCGCACGGAAGGGACACCTGGTGCATTTCGGGGAGCATAGGGGAAAGT
CTCGCTTAGTTTTCCATGTACCATCGCGTGGATTGCTGGGGTTCATGAAT
GAGATCAAGACGGACACGCGAGGCTCGGCTGTAGTCACTCGGCTCTTTTT
GGAGCACAAGGCCTCGGTGGGGCAGATTGATGCCTTGTTCAAAGGTAAGC
TGATAAGCATGGAGCGTGGGGCTGCCACAGCGTATGCGCTCAATATGCTT
GAGGAAAGAGGGGTGTTGTTCGTGCAGCCGGGGGAAGAAGTTTATCCGGG
CATGATCATTGGCGAACACAACCGAGCGGTGGACCTGGACGTAAACCCGA
CCAAGGGGAAAAAATTGAGCAATGTTCGCAGTGTCAGTGCTGATGAGGCG
ATTCGACTGACACCGCCTATTGTTAGAGTTTTGGAGGAATATCTCGCTTA
CATGAATGAGGATGAGAAGTTGGAGGTCACGCCCAGCAAACTGCGCCTTC
GAAAGCGTGAGCTGGACCCAAATGTGCGCGCTCGAAAGGGAAAAGGTGCC
GATTCACAGGTCTCGGTGCCAACCGGAGTTGAGTACGAGATGCGGACACT
TTCCAAAGTTTTGGCTACTACCACGATTCTGGCACCCTCTCTCGTATTCG
GAGACGTCCAAGATACTTTACATGAAACTAGACATCCTGTATCTGACGTT
ATCCTAAATGGTAACACCAAAGAAGGGCATCAAGCGAAAGCGGTCGAGAC
GCTGAAATTGCGCATCGACGAAAGGGGGTGCTATGTCCTGGCCGGTCCTG
AGTCAAAGCTTTCACTTTCACTTTGCGAGGATGATGTCGGAGCACGACAG
CAATTCACCAAAGAAGGGACTCCCATTAAGACTGTCAATGACGGTCTTTC
CTTTGCTATGTCTGAGACTCCTGTCGAAACTTTTTCTTGGGTAAATGGAA
CTGTCACAAATATTGGGGAGGTTCCAATTTGTTATGTGGCATTTGCATCC
CGCGACACGAATCTTCTAGCGGAGGCACTGCATACTATTCCTGTCAACCT
GCCAACAACTACCGTTGATGTTCCGCCTGTGGAATCAGTGGATCTGGCTC
CAGGACAGGCCATCGATTTCGCCTACCTCTTACCCTTCGACGACTCCCGG
GATGCACCCGCCTTTGTTGGCCTCGCAAATTCTCTCCAGGCCTGCAGCCA
TGCGGTGAGAACCTTCGTACCCGTTATGTCCGTCATGACAAAGGCCACAG
ACGTAGAAAAGATTGACGATAAAGGAGCTGGGGCATCGGCGTCTACGACT
GTCATAGACAAGACCCAAGTCAAGTCAGCTGCCGCTGTGGACACAATACA
AGCGACGGCCAACAACGCTCTTGACAGCACGCAGTCTAAACTTGATGAAG
CGATTAACAACTTGCAGAATGCGCTGGGAAGATCCGAAGCAAAGAAAACG
GTACCTGTCGCAACGAGTACCAGCGTCGATGCAAACGCTGCCAGTGCCGG
ATCAATGTCTAAAGATGCTGCCAAGCCAGCTGGTGTGGAAGTCACAAAAG
AGACGGGGACGGACACCAACCGAGATGCGTCTCACTCTCCCACAGAAGAG
GAAGAGCTTGTGAACACCTCTCCCGCTGGCCATGTCACCACCTCTGCCAA
TATCTTCCTTCTGGTCCTGACTGCAACTCTTTCCGGCATGGCCGTTTTTA
AAAAAGTTCAACTTTCCTGGAGACGTTCGAAAAGAACGCCCGGTTGCCTA
CATGCCGAACTATCGCATAATCAGAAGAAAGAAACCATCACGAGATGA back to topprotein sequence of rna2550 >rna2550-protein ID=rna2550-protein|Name=rna2550|organism=Nannochloropsis gaditana|type=polypeptide|length=429bp
MVVDSHPRLRLVRASEVDDLAKLNEPVEALARTQAMEIIEDIKANGKVAL
LQQAVRLGDIKSTEEPILLGKPELEKAWMSLTPGQREMLQRTRDRIEAFA
TAQRGAINDVSMTIPGGSAGHTIAPMGVAGCYAPGGRYPLPSSVLMTAVT
ARAAGVGKVWVASPRPSAVTLGAAFIAQADAFLAVGGAQAVAALAYGVGG
VDACDIIVGPGNKWVTAAKSLISGVCAIDMLAGPSEVLVLADANADVQTV
AADLLAQAEHDVEARPILVATSRHVIDSVNEALGEQLAVLPTGETARAAV
LKGFAVEVSSIEEGIQISDKIAPEHLEIQTAEASDVAFRCRNYGAVFIGH
GAAEVLGDYGAGPNHVLPTGGTAKYTGGLSVFTFLRIRTWMQMEDALGGQ
VVVKDAVELARLEGLEGHARAAEKRLLPA back to topmRNA from alignment at CM002459.1:638276..640172- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2550 ID=rna2550|Name=rna2550|organism=Nannochloropsis gaditana|type=mRNA|length=1897bp|location=Sequence derived from alignment at CM002459.1:638276..640172- (Nannochloropsis gaditana)
AAAGTCAAATCGATGCCACATCATACTTCATAAGCGAAAGTCGCTCGTGA
GCGCAAAGCTAACCCAGCCAAGCTTTCGCTTGTTTTTCGGAATGAGGACG
AAAAGCAATCGTGGCATGCTTACTGCCAAGGGCCCTTCCCGGGGGAGGGG
AGGTGGAGCTCCATGGAGGCATGCCTTGCGATCTCTGACTACATATTTGC
TTAGTCTTTTTCCAATCTCTGAAACCTATGTCAAGCATTCGTCGTGACAG
TGGCCTTGAGACTTTTTTTTCGTGGAGCATCATTCGAGGAGATCCATGGT
GGTGGACAGTCATCCGCGCTTGCGGCTCGTGAGGGCCAGCGAAGTAGATG
ACCTGGCCAAACTCAACGAGCCCGTCGAGGCTCTTGCCCGGACACAAGCA
ATGGAGATCATCGAAGACATCAAGGTGGGTTGATTGTTATCATGCATCAC
GACCGCAAATGTTCGCAGAATTTGCCGTTTTAAGTCTCTGCTCCCACCTG
TTCAGGCGAACGGCAAGGTGGCTCTGCTCCAGCAAGCCGTGCGTTTGGGA
GATATCAAGTCCACTGAGGAGCCCATTCTGCTTGGGAAGCCAGAGTTGGA
GAAAGCATGGATGTCTCTGACACCCGGGCAGCGGGAGATGCTACAGCGCA
CGAGGGACAGGATCGAGGCATTTGCGACTGCTCAGCGAGGCGCGATAAAT
GACGTATCCATGACAATACCTGGGGGCTCTGCAGGTCATACAATAGCACC
GATGGGCGTGGCGGGATGCTATGCCCCGGGAGGACGATATCCGTTGCCGT
CCTCAGTACTAATGACGGCTGTGACAGCGCGGGCGGCGGGCGTGGGCAAG
GTATGGGTGGCTTCTCCCCGACCCTCGGCGGTCACATTGGGGGCTGCTTT
TATCGCGCAGGCGGACGCTTTCCTAGCGGTAGGCGGGGCGCAAGCAGTGG
CAGCGCTGGCGTATGGCGTGGGGGGGGTGGACGCGTGCGACATCATCGTA
GGCCCCGGCAACAAATGGGTGACAGCCGCCAAGTCCCTCATCTCCGGCGT
CTGTGCCATCGACATGCTCGCGGGCCCATCGGAAGTTCTTGTTCTCGCGG
ATGCAAATGCGGACGTCCAGACCGTGGCCGCGGACTTACTTGCGCAAGCA
GAGCATGACGTGGAGGCTCGTCCCATCCTGGTGGCCACATCCCGCCACGT
GATCGACAGCGTGAACGAGGCCTTGGGCGAGCAGCTTGCCGTCCTGCCCA
CGGGCGAGACTGCTCGGGCTGCCGTGCTGAAGGGCTTTGCCGTCGAAGTC
AGCAGCATCGAGGAGGGCATCCAGATCTCGGACAAAATCGCACCGGAGCA
CCTGGAGATCCAGACGGCGGAGGCCTCGGACGTCGCTTTCCGATGCAGGA
ACTACGGAGCCGTTTTCATCGGCCATGGCGCGGCGGAGGTCTTGGGTGAC
TATGGTGCGGGACCTAACCACGTTTTACCGACGGGCGGTACGGCAAAGTA
CACGGGAGGGCTCAGCGTTTTCACTTTCTTGCGGATACGGACCTGGATGC
AGATGGAGGACGCGCTCGGGGGCCAGGTTGTGGTGAAGGACGCCGTGGAG
CTTGCCCGCTTGGAGGGACTGGAGGGGCATGCCCGGGCTGCAGAGAAGCG
TCTTCTGCCCGCTTAGGGTTGAGAAGGTATTTTACTTCTTTGCTTTTGTA
GGGCCAGAGAGGGGGCTAGGAGGTTTGCTTGACGGTCGAGACTCGCCGGC
TGAGGAGGGAGAAAGGTAAAGAATTACGTGTTGCAAAAGTCGTCTTTGAG
CAGACATCTATGGGGCAAACATGACTATGATGTCTTGAGTAGGACAACCT
TTTGAGGGTAAAGCGTCCTGACAGAAGCCATGACCCCACCTCATCCG back to topCoding sequence (CDS) from alignment at CM002459.1:638276..640172- >rna2550 ID=rna2550|Name=rna2550|organism=Nannochloropsis gaditana|type=CDS|length=2580bp|location=Sequence derived from alignment at CM002459.1:638276..640172- (Nannochloropsis gaditana)
GCGAACGGCAAGGTGGCTCTGCTCCAGCAAGCCGTGCGTTTGGGAGATAT
CAAGTCCACTGAGGAGCCCATTCTGCTTGGGAAGCCAGAGTTGGAGAAAG
CATGGATGTCTCTGACACCCGGGCAGCGGGAGATGCTACAGCGCACGAGG
GACAGGATCGAGGCATTTGCGACTGCTCAGCGAGGCGCGATAAATGACGT
ATCCATGACAATACCTGGGGGCTCTGCAGGTCATACAATAGCACCGATGG
GCGTGGCGGGATGCTATGCCCCGGGAGGACGATATCCGTTGCCGTCCTCA
GTACTAATGACGGCTGTGACAGCGCGGGCGGCGGGCGTGGGCAAGGTATG
GGTGGCTTCTCCCCGACCCTCGGCGGTCACATTGGGGGCTGCTTTTATCG
CGCAGGCGGACGCTTTCCTAGCGGTAGGCGGGGCGCAAGCAGTGGCAGCG
CTGGCGTATGGCGTGGGGGGGGTGGACGCGTGCGACATCATCGTAGGCCC
CGGCAACAAATGGGTGACAGCCGCCAAGTCCCTCATCTCCGGCGTCTGTG
CCATCGACATGCTCGCGGGCCCATCGGAAGTTCTTGTTCTCGCGGATGCA
AATGCGGACGTCCAGACCGTGGCCGCGGACTTACTTGCGCAAGCAGAGCA
TGACGTGGAGGCTCGTCCCATCCTGGTGGCCACATCCCGCCACGTGATCG
ACAGCGTGAACGAGGCCTTGGGCGAGCAGCTTGCCGTCCTGCCCACGGGC
GAGACTGCTCGGGCTGCCGTGCTGAAGGGCTTTGCCGTCGAAGTCAGCAG
CATCGAGGAGGGCATCCAGATCTCGGACAAAATCGCACCGGAGCACCTGG
AGATCCAGACGGCGGAGGCCTCGGACGTCGCTTTCCGATGCAGGAACTAC
GGAGCCGTTTTCATCGGCCATGGCGCGGCGGAGGTCTTGGGTGACTATGG
TGCGGGACCTAACCACGTTTTACCGACGGGCGGTACGGCAAAGTACACGG
GAGGGCTCAGCGTTTTCACTTTCTTGCGGATACGGACCTGGATGCAGATG
GAGGACGCGCTCGGGGGCCAGGTTGTGGTGAAGGACGCCGTGGAGCTTGC
CCGCTTGGAGGGACTGGAGGGGCATGCCCGGGCTGCAGAGAAGCGTCTTC
TGCCCGCTTAGATGGTGGTGGACAGTCATCCGCGCTTGCGGCTCGTGAGG
GCCAGCGAAGTAGATGACCTGGCCAAACTCAACGAGCCCGTCGAGGCTCT
TGCCCGGACACAAGCAATGGAGATCATCGAAGACATCAAGGCGAACGGCA
AGGTGGCTCTGCTCCAGCAAGCCGTGCGTTTGGGAGATATCAAGTCCACT
GAGGAGCCCATTCTGCTTGGGAAGCCAGAGTTGGAGAAAGCATGGATGTC
TCTGACACCCGGGCAGCGGGAGATGCTACAGCGCACGAGGGACAGGATCG
AGGCATTTGCGACTGCTCAGCGAGGCGCGATAAATGACGTATCCATGACA
ATACCTGGGGGCTCTGCAGGTCATACAATAGCACCGATGGGCGTGGCGGG
ATGCTATGCCCCGGGAGGACGATATCCGTTGCCGTCCTCAGTACTAATGA
CGGCTGTGACAGCGCGGGCGGCGGGCGTGGGCAAGGTATGGGTGGCTTCT
CCCCGACCCTCGGCGGTCACATTGGGGGCTGCTTTTATCGCGCAGGCGGA
CGCTTTCCTAGCGGTAGGCGGGGCGCAAGCAGTGGCAGCGCTGGCGTATG
GCGTGGGGGGGGTGGACGCGTGCGACATCATCGTAGGCCCCGGCAACAAA
TGGGTGACAGCCGCCAAGTCCCTCATCTCCGGCGTCTGTGCCATCGACAT
GCTCGCGGGCCCATCGGAAGTTCTTGTTCTCGCGGATGCAAATGCGGACG
TCCAGACCGTGGCCGCGGACTTACTTGCGCAAGCAGAGCATGACGTGGAG
GCTCGTCCCATCCTGGTGGCCACATCCCGCCACGTGATCGACAGCGTGAA
CGAGGCCTTGGGCGAGCAGCTTGCCGTCCTGCCCACGGGCGAGACTGCTC
GGGCTGCCGTGCTGAAGGGCTTTGCCGTCGAAGTCAGCAGCATCGAGGAG
GGCATCCAGATCTCGGACAAAATCGCACCGGAGCACCTGGAGATCCAGAC
GGCGGAGGCCTCGGACGTCGCTTTCCGATGCAGGAACTACGGAGCCGTTT
TCATCGGCCATGGCGCGGCGGAGGTCTTGGGTGACTATGGTGCGGGACCT
AACCACGTTTTACCGACGGGCGGTACGGCAAAGTACACGGGAGGGCTCAG
CGTTTTCACTTTCTTGCGGATACGGACCTGGATGCAGATGGAGGACGCGC
TCGGGGGCCAGGTTGTGGTGAAGGACGCCGTGGAGCTTGCCCGCTTGGAG
GGACTGGAGGGGCATGCCCGGGCTGCAGAGAAGCGTCTTCTGCCCGCTTA
GATGGTGGTGGACAGTCATCCGCGCTTGCGGCTCGTGAGGGCCAGCGAAG
TAGATGACCTGGCCAAACTCAACGAGCCCGTCGAGGCTCTTGCCCGGACA
CAAGCAATGGAGATCATCGAAGACATCAAG back to top
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