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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100004g180.9228.mrna |
| Orig protein id | gnl|cribi|Naga_100004g180.9228 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002459.1 | supercontig | CM002459.1:608320..609629 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2537 ID=rna2537|Name=rna2537|organism=Nannochloropsis gaditana|type=mRNA|length=4225bp
GGATGACTGATTGGAACATAAATTAACACCACACCTCCACAAACAGGGTC
GTTGTGCATTTTTGGGCCAGTGGAGTTAACACTGTGCACCTACTGCGTCC
TTACTCTGGGTGAGACGGGCTGAGTCATAGGCTCCCCTCTACTCCTCCAC
CCTCGTCGGTGTTGTGGAAGATTTCTTGTTGTTCCGGCACCCAACAGGCT
CGATCGGGCAACCGGTCATAGTAGCAAATTCAGACATGAAAGGTTTGCTG
CTAGAGATGACATGGCTAGTAATCATGCTTGTGTTTGGGACGGCACCGTC
AACCGGTTTTCGGCTGGCCGGAGACCCAGTCACGAATATGATGCCGACCA
GGTCGCGGGGGCTAACCTTGGCGGCTTTGAGCCTCGAGGGCGACGTGAGC
ACCTTTGGAGGCAGTGAGCAGGATATGTCCGCGTCCACACGTCTGCAAAA
GGCACGGTTGCGTCTTGCCGAGGCCCAGGGCATCATTCCAGCCGGCTCGA
GCGAGCGGTATCAAACGCCTGGCGGGCCCCCGCGCACCACCAAAGTCCGG
GACCTGACTTTTAAGGTGGCAGAACCGGAGGTACAGTATGACCCTGACGA
AGCGGAAGCGCGGCTTTGGCGGCAGCCGCTGAGATGGCTGAGGCGCAATG
TGGACCTGTTCGTTCCCCTGACCGCCTTCCTGCTCCGAGTCATCTCGGAC
ATTGCCACCGACCAGGAGGAGCAGCACCGGCGGAAGAGAGCCCAGGAACT
ACTCGAGATTATCAGCAAGCTAGGTCCGGCGGTCATTAAGGCAGGACAGG
CCTTGTCATCGCGCCCAGACCTCCTGCCCACCGAGTACTTGGAGGAGCTC
CAGAAGCTGCAGGACCGCCTGCCGCCCTTTCCGAACGAGCAGGCCTTCCA
AGTGGTGGAGGCGGAGTTGGGCGTCCCATTCGATCAAGTCTTCGAGCTGC
TGGAGGAAAACCCGATCGCGGCAGCCTCCATCGGCCAGGTCTACAAGGCA
ACACTGCGCTCGACTGGCGAGACGGTCGCGGTGAAGGTCCAGCGGCCTCG
CTGCGAGGAAATTATCTCCGTGGATTTGTACGTCCTTCGCTGGTATGCTG
GCCTGATCAACCGGATTTTGGGCATGTTGCAGCGCGACATCGACGTCATC
GCGGTGATCGACGACTTCGGGGAGCTTATCTACCGGGAAATCGACTACAC
GGCCGAGGCCGCCAACGCCCAGCGCTTCGTGGAGCTCTACGGGGGACTCC
CGGACATCTTCGTGCCTCGGGTCTACACCGAGCTCTCCACGCGCAAGGTC
CTGACCCTGGAGTGGGTGGATGGCGCCCGCCTGGTGGACCAGCGCCAACT
CGAGGCCTACCGTGCCGACCCGACCAAGCTGGTGGATCGGCTCGTCCAAT
GCTCTCTCCGACAGATGCTCGAGAACGGGTTCTTCCACGCGGATCCCCAC
GCTGGAAACCTGCTCTGCACCCCCGAGGGCCAGCTTTGCTACCTGGACTT
TGGGATGATGAGCTATGTGGAGTCCAATCAGAGGTATGGCATCATCGAGG
CGGTCATACACCTGGTCAACCGGGACTTCACCTCCCTCGCCTCACTCTAT
CAGCGCATGGGCTTCATCCCCGGCGACGTCGACACACGGCCGATCATTGT
TGCCCTGGAGGCCGCCCTCCCCGAGGTTTTGAACGCCTCCGTGGGCGAGC
TGAACTTCAAGAACGTGATCAACAAGCTCGGTGACGTCATGTACAAGTTC
CCCTTCTCCCTACCGCCCTACTACATCGCTATCATCCGCTGCCTGGGGGT
GCTGGAGGGCCTGGCCCTGCAAGTGGACCCGAACTCCCGCATCATCAACG
ACGCATACCCCTACATCGCCTCACGCCTCCTTACAGACTCTTCGCCGGAG
CTTCAGGCCGCCCTGCACAAGCTCATCTTCAAGGCGGGTCGCCCACGTTG
GGAGCGGCTCGAGCAGCTCTTGGAGGTGGCAGGCAGCACATCGGACTACG
ACGTGACTTTGGCGATGGACCAGCTCCTCGATTACATACTCTCCGAGCAA
GGGACCGAATTTCGTCGCATTTTTGCCACCGAACTGGTGGACGCAGTCGA
CCAGCTTGGCGCGGACACGACATCCTACGTTCTGAAAAATTGGCGATCGC
TGTCTTTGGGCCAGGCCACAGCCGCTCTCTCCCCCTCCCTGGTCGCTTTC
TCGACTGGCACCGAGGAGGACGTCGTTCCAGATCCATTCGAGCTGGCGGG
TCTCCCGGACGAAGATATGACGCCAACTATGCTGGCCGCGCGTCGTGTCG
CACGCACCCTTGCGCTGAGCCGGGGTTTTGATGCGGAACGGCTGCTTCCT
CTCGTCCGACGGCTCGTTCAAGAACCCAAGGCCCAAGACCTGGGGCTTGG
AATCGCGGCAGACATATCCGAGCGGTTTGTCTCTCGCCTTATTCGTACTA
TTTTTCAAGTACCAGAGCCAGTGTAGCATTTGAAGTCAGGACGGGGTGCT
TCCCGAGCAGGGATCCCTTCGAGACCCTCGAATTATGTCTGATTCATATA
GTGTAGCAGGAGTGTAATAGTATCCCGACAGAACATGCTTTTGTGTCATG
TCCTGCATTGTCGCGCAAAACTATAAAAATAAATCAGTAGGAGAGATGTC
CCCTGTATCTTCCGTGCCGGATCCTACCCTAAGTGTAAAGCAGACTCTCT
CTTGATGGAGAACTCAAATAAAGAAAACTAATGAGAGCTAACCGCCCCTC
AGTGGGTGCGTGTTGATTGGTGCTTTAGCTTTCAGTGCGTCATTTCGTAC
TACTTGCGAGTCACACTGTCAGCCTTTATGTTACACGTTGTGTATCGCGT
TGGCATGTAATTATCGGTCCTTGACTGTTCGCATCATGTATGTCTCTACA
GGCCTAGCACAAGGATGAAAATCAGGGCGTTGACAATTGGTATCAAGATC
GAAAGCATAGATGACATCGAGGACGCGTTCTTGCGCGCCAGTGCCTTGGG
ATGCGAGCTCAAGAAGGGGATCGAGGAAGACTCCCGTAACGGCATGGAAG
TTCAGACCATTCGCATCGCAACTAATTCCTTCGAAGACTGGATTGGCTGC
TTTGAGGATGCAGGCATCGAGGATCCCCGTGCATCTAACAGTGGAAAGTC
CGCCACTGTAGCAGAAAGGGCTTCGCGCATCGCACGAGCTTGCGAGGCCA
CTGGCTTGGAGTTTTGTAGTCTAGGCCCGGCAAGATCCGTGGAGGGCATT
CTGGCAATCCCGACGTTGCTGAAAGCTTCAAGCCGCATAAGCGCCTCGGC
CGGCTTGCAATGCTGCGAGCTAACGGATGGATGCGATAAAGAGATACTCG
AAGGGAAGAAGAGGGATGCCGTTGTGAAGGTCATGGCGCAGTTGACCCTA
GATGGAGAGCTCGGTAATTTTCGGTTTGCTGCAGGGGTAAATATTGAGGC
GAATACCCCTTTTTTCCCTGTGGCCTTCCACGACCCTTCAGCACCGACAA
CTGTCAGCATAGGAACTGAGAACAGTGACCTGGTTGTGAAGGCATTCCAA
GACACAGCTGGCAGTGGTTTGAACGAGGCAGCGCGGCGCCTCGAGACTTT
GATGGAAGCGCAGCTGCTCCCCTTGCAAGATTTAGTGCGACGTCTACTGA
TGGCAAGACCGAGTGATTGCCCTAGTGTGGTCTTCGGTGGTATCGATACG
AGCATCAATCCGTCACTGCAGAGCCCCGAGCACAGTCTCGTGCGGGCTTA
TGAAACGGTGTTGGGGGAAGGAAACTTTGGGAGAAGCGGGACGTTGGCCG
TGTCGGAAGCCTTGACACGGGTCGTGCATGCGGGCCTCCCAGGTCTGATA
AAAGTAGGCTTTTGTGGACTTATGCTCCCGGCAATGGAAGATACTTTGCT
AGCTGCCCGCGCCAGTCAAGACAGGCCCGCCTACGGCATCTCAGATCTTC
TCACCTATTCTGCTGTGTGCGGCGCGGGTGTCGATACCGTGCCCGTCAGC
TTATCTGAGGTGCAGGCAATGCCCCAACGCGTCGCCGCCCTTCTTCTTGA
CGTAGCCGCACTTTCGCGGAAGAAAGGACGGCCCCTTGCTTGTCGTCTTC
TTCCTGTAGTGGGTGCGAAAGTGGGACATATGACGTCCTTCAGCTCGCCT
TACCTTGTGAACGCACGCATATTCGCCCTTCCCTGAAGCTAGATCCGCAC
CCAAATGAACTTGTTTGCACATACT back to topprotein sequence of rna2537 >rna2537-protein ID=rna2537-protein|Name=rna2537|organism=Nannochloropsis gaditana|type=polypeptide|length=311bp
MRAFTSIFHCREHKSTKAYFYQTWEARMHDPSRTRLCSGLCSDGLMLVSI
PPKTTLGQSLGLAISRRRTKSCKGSSCASIKVSRRRAASFKPLPAVSWNA
FTTRSLFSVPMLTVVGAEGSWKATGKKGVFASIFTPAANRKLPSSPSRVN
CAMTFTTASLFFPSSISLSHPSVSSQHCKPAEALMRLEAFSNTTKLQASG
LASSCDARSPFCYSGGLSTVRCTGILDACILKAANPVFEGISCDANGLNF
HAVTGVFLDPLLELASQGTGAQERVLDVIYAFDLDTNCQRPDFHPCARPV
ETYMMRTVKDR back to topmRNA from alignment at CM002459.1:608320..609629+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2537 ID=rna2537|Name=rna2537|organism=Nannochloropsis gaditana|type=mRNA|length=1310bp|location=Sequence derived from alignment at CM002459.1:608320..609629+ (Nannochloropsis gaditana)
ATGCGTGCGTTCACAAGGTAAGGCGAGCTGAAGGACGTCATATGTCCCAC
TTTCGCACCCACtacaggaagaagacgacaagCAAGGGGccgtcctttct
tccgcGAAAGTGCGGCTAcgtcaagaagaagggcggcgACGCGTTGGGGC
ATTGCCTGCACCTCAGATAAGCTGACGGGCACGGTATCGACACCCGCGCC
GCACACAGCAGAATAGGTGAGAAGATCTGAGATGCCGTAGGCGGGCCTGT
CTTGACTGGCGCGGGCAGCTAGCAAAGTATCTTCCATTGCCGGGAGCATA
AGTCCACAAAAGCCTACTTTTATCAGACCTGGGAGGCCCGCATGCACGAC
CCGTGTCAAGGCTTCCGACACGGCCAACGTCCCGCTTCTCCCAaagtttc
cttcccccaacACCGTTTCATAAGCCCGCACGAGACTGTGCTCGGGGCTC
TGCAGTGACGGATTGATGCTCGTATCGATACCACCGAAGACCACACTAGG
GCAATCACTCGGTCTTGCCATCAGTAGACGTCGCACTAAATCTTGCAAGG
GGAGCAGCTGCGCTTCCATCAAAGTCTCGAGGCGCCGCGCTGCCTCGTTC
AAACCACTGCCAGCTGTGTCTTGGAATGCCTTCACAACCAGGTCACTGTT
CTCAGTTCCTATGCTGACAGTTGTCGGTGCTGAAGGGTCGTGGAAGGCCa
cagggaaaaaaggggtaTTCGCCTCAATATTTACCCCTGCAGCAAACCGA
AAATTACCGAGCTCTCCATCTAGGGTCAACTGCGCCATGACCTTCACAAC
GGcatccctcttcttcccttcgagTATCTCTTTATCGCATCCATCCGTTA
GCTCGCAGCATTGCAAGCCGGCCGAGGCGCTTATGCGGCTTGAAGCTTTC
AGCAACGTCGGGATTGCCAGAATGCCCTCCACGGATCTTGCCGGGCCTAG
ACTACAAAACTCCAAGCCAGTGGCCTCGCAAGCTCGTGCGATGCGCGAAG
CCCTTTCTGCTACAGTGGCGGACTTTCCACTGTTAGATGCACGGGGATCC
TCGATGCCTGCATCCTCAAAGCAGCCAATCCAGTCTTCGAAGGAATTAGT
TGCGATGCGAATGGTCTGAACTTCCATGCCGTTACGGGAGTCTTCCTCGA
TCCCCTTCTTGAGCTCGCATCCCAAGGCACTGGCGCGCAAGAACGCGTCC
TCGATGTCATCTATGCTTTCGATCTTGATACCAATTGTCAACGCCCTGAT
TTTCATCCTTGTGCTAGGCCTGTAGAGACATACATGATGCGAACAGTCAA
GGACCGATAA back to topCoding sequence (CDS) from alignment at CM002459.1:608320..609629+ >rna2537 ID=rna2537|Name=rna2537|organism=Nannochloropsis gaditana|type=CDS|length=3744bp|location=Sequence derived from alignment at CM002459.1:608320..609629+ (Nannochloropsis gaditana)
ATGCGTGCGTTCACAAGTATCTTCCATTGCCGGGAGCATAAGTCCACAAA
AGCCTACTTTTATCAGACCTGGGAGGCCCGCATGCACGACCCGTCCCGCA
CGAGACTGTGCTCGGGGCTCTGCAGTGACGGATTGATGCTCGTATCGATA
CCACCGAAGACCACACTAGGGCAATCACTCGGTCTTGCCATCAGTAGACG
TCGCACTAAATCTTGCAAGGGGAGCAGCTGCGCTTCCATCAAAGTCTCGA
GGCGCCGCGCTGCCTCGTTCAAACCACTGCCAGCTGTGTCTTGGAATGCC
TTCACAACCAGGTCACTGTTCTCAGTTCCTATGCTGACAGTTGTCGGTGC
TGAAGGGTCGTGGAAGGCCacagggaaaaaaggggtaTTCGCCTCAATAT
TTACCCCTGCAGCAAACCGAAAATTACCGAGCTCTCCATCTAGGGTCAAC
TGCGCCATGACCTTCACAACGGcatccctcttcttcccttcgagTATCTC
TTTATCGCATCCATCCGTTAGCTCGCAGCATTGCAAGCCGGCCGAGGCGC
TTATGCGGCTTGAAGCTTTCAGCAACACTACAAAACTCCAAGCCAGTGGC
CTCGCAAGCTCGTGCGATGCGCGAAGCCCTTTCTGCTACAGTGGCGGACT
TTCCACTGTTAGATGCACGGGGATCCTCGATGCCTGCATCCTCAAAGCAG
CCAATCCAGTCTTCGAAGGAATTAGTTGCGATGCGAATGGTCTGAACTTC
CATGCCGTTACGGGAGTCTTCCTCGATCCCCTTCTTGAGCTCGCATCCCA
AGGCACTGGCGCGCAAGAACGCGTCCTCGATGTCATCTATGCTTTCGATC
TTGATACCAATTGTCAACGCCCTGATTTTCATCCTTGTGCTAGGCCTGTA
GAGACATACATGATGCGAACAGTCAAGGACCGATAAATGCGTGCGTTCAC
AAGTATCTTCCATTGCCGGGAGCATAAGTCCACAAAAGCCTACTTTTATC
AGACCTGGGAGGCCCGCATGCACGACCCGTCCCGCACGAGACTGTGCTCG
GGGCTCTGCAGTGACGGATTGATGCTCGTATCGATACCACCGAAGACCAC
ACTAGGGCAATCACTCGGTCTTGCCATCAGTAGACGTCGCACTAAATCTT
GCAAGGGGAGCAGCTGCGCTTCCATCAAAGTCTCGAGGCGCCGCGCTGCC
TCGTTCAAACCACTGCCAGCTGTGTCTTGGAATGCCTTCACAACCAGGTC
ACTGTTCTCAGTTCCTATGCTGACAGTTGTCGGTGCTGAAGGGTCGTGGA
AGGCCacagggaaaaaaggggtaTTCGCCTCAATATTTACCCCTGCAGCA
AACCGAAAATTACCGAGCTCTCCATCTAGGGTCAACTGCGCCATGACCTT
CACAACGGcatccctcttcttcccttcgagTATCTCTTTATCGCATCCAT
CCGTTAGCTCGCAGCATTGCAAGCCGGCCGAGGCGCTTATGCGGCTTGAA
GCTTTCAGCAACACTACAAAACTCCAAGCCAGTGGCCTCGCAAGCTCGTG
CGATGCGCGAAGCCCTTTCTGCTACAGTGGCGGACTTTCCACTGTTAGAT
GCACGGGGATCCTCGATGCCTGCATCCTCAAAGCAGCCAATCCAGTCTTC
GAAGGAATTAGTTGCGATGCGAATGGTCTGAACTTCCATGCCGTTACGGG
AGTCTTCCTCGATCCCCTTCTTGAGCTCGCATCCCAAGGCACTGGCGCGC
AAGAACGCGTCCTCGATGTCATCTATGCTTTCGATCTTGATACCAATTGT
CAACGCCCTGATTTTCATCCTTGTGCTAGGCCTGTAGAGACATACATGAT
GCGAACAGTCAAGGACCGATAAATGCGTGCGTTCACAAGTATCTTCCATT
GCCGGGAGCATAAGTCCACAAAAGCCTACTTTTATCAGACCTGGGAGGCC
CGCATGCACGACCCGTCCCGCACGAGACTGTGCTCGGGGCTCTGCAGTGA
CGGATTGATGCTCGTATCGATACCACCGAAGACCACACTAGGGCAATCAC
TCGGTCTTGCCATCAGTAGACGTCGCACTAAATCTTGCAAGGGGAGCAGC
TGCGCTTCCATCAAAGTCTCGAGGCGCCGCGCTGCCTCGTTCAAACCACT
GCCAGCTGTGTCTTGGAATGCCTTCACAACCAGGTCACTGTTCTCAGTTC
CTATGCTGACAGTTGTCGGTGCTGAAGGGTCGTGGAAGGCCacagggaaa
aaaggggtaTTCGCCTCAATATTTACCCCTGCAGCAAACCGAAAATTACC
GAGCTCTCCATCTAGGGTCAACTGCGCCATGACCTTCACAACGGcatccc
tcttcttcccttcgagTATCTCTTTATCGCATCCATCCGTTAGCTCGCAG
CATTGCAAGCCGGCCGAGGCGCTTATGCGGCTTGAAGCTTTCAGCAACAC
TACAAAACTCCAAGCCAGTGGCCTCGCAAGCTCGTGCGATGCGCGAAGCC
CTTTCTGCTACAGTGGCGGACTTTCCACTGTTAGATGCACGGGGATCCTC
GATGCCTGCATCCTCAAAGCAGCCAATCCAGTCTTCGAAGGAATTAGTTG
CGATGCGAATGGTCTGAACTTCCATGCCGTTACGGGAGTCTTCCTCGATC
CCCTTCTTGAGCTCGCATCCCAAGGCACTGGCGCGCAAGAACGCGTCCTC
GATGTCATCTATGCTTTCGATCTTGATACCAATTGTCAACGCCCTGATTT
TCATCCTTGTGCTAGGCCTGTAGAGACATACATGATGCGAACAGTCAAGG
ACCGATAAATGCGTGCGTTCACAAGTATCTTCCATTGCCGGGAGCATAAG
TCCACAAAAGCCTACTTTTATCAGACCTGGGAGGCCCGCATGCACGACCC
GTCCCGCACGAGACTGTGCTCGGGGCTCTGCAGTGACGGATTGATGCTCG
TATCGATACCACCGAAGACCACACTAGGGCAATCACTCGGTCTTGCCATC
AGTAGACGTCGCACTAAATCTTGCAAGGGGAGCAGCTGCGCTTCCATCAA
AGTCTCGAGGCGCCGCGCTGCCTCGTTCAAACCACTGCCAGCTGTGTCTT
GGAATGCCTTCACAACCAGGTCACTGTTCTCAGTTCCTATGCTGACAGTT
GTCGGTGCTGAAGGGTCGTGGAAGGCCacagggaaaaaaggggtaTTCGC
CTCAATATTTACCCCTGCAGCAAACCGAAAATTACCGAGCTCTCCATCTA
GGGTCAACTGCGCCATGACCTTCACAACGGcatccctcttcttcccttcg
agTATCTCTTTATCGCATCCATCCGTTAGCTCGCAGCATTGCAAGCCGGC
CGAGGCGCTTATGCGGCTTGAAGCTTTCAGCAACACTACAAAACTCCAAG
CCAGTGGCCTCGCAAGCTCGTGCGATGCGCGAAGCCCTTTCTGCTACAGT
GGCGGACTTTCCACTGTTAGATGCACGGGGATCCTCGATGCCTGCATCCT
CAAAGCAGCCAATCCAGTCTTCGAAGGAATTAGTTGCGATGCGAATGGTC
TGAACTTCCATGCCGTTACGGGAGTCTTCCTCGATCCCCTTCTTGAGCTC
GCATCCCAAGGCACTGGCGCGCAAGAACGCGTCCTCGATGTCATCTATGC
TTTCGATCTTGATACCAATTGTCAACGCCCTGATTTTCATCCTTGTGCTA
GGCCTGTAGAGACATACATGATGCGAACAGTCAAGGACCGATAA back to top
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