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Properties
| Property Name | Value |
|---|
| Product | actin-related protein 6 |
| Orig transcript id | gnl|cribi|Naga_100210g13.8075.mrna |
| Orig protein id | gnl|cribi|Naga_100210g13.8075 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002455.1 | supercontig | CM002455.1:636115..638096 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna253 ID=rna253|Name=rna253|organism=Nannochloropsis gaditana|type=mRNA|length=2302bp
GCCGGGGAGGCAGTGAGAGCTTCTCTTTTTCACCCACAGGTGCAGATACT
GGCACTTTCACGGCTTATCGTCCCGTCACAATGAGATAATTGGAACCGTA
TGAGACGTACTTTCCTGCCTGCTCCATCCAGTTTCCCCTCTTCCTACCCT
GGAACATTTGACCAACATTACGATTACATGTAGAACACCACTAAACCCCT
CCTTACCTGCAACTGGCCCTTTAATTTGGCCATACAATTGGGTATGTAGA
AGCGCGGAGCTGGGTCTCCCGCGAATCCCATTTTCATGCGGTCAGCCCCG
TTGTCCAGTACCAGCGTGACGAAATCCCCTTCATTTTGAGGTCTCGTTAC
TATGTTTGTGTTGTTCGTATTTTGGTGCCCTGAGAAACCTGTGCCAGAGG
CTCCGCTGGCAGCCGGTGGTGCCATCGCTCAGAGTGCCGGCCCCCCGGGA
TCCTGTGTGAGTCCCTGCGCCCTGTGAGCCCCGCACCACCTAGGAAGTAG
GACGCATTTGAAAGCTAGAGAGGGGAAAACAGGAAAGAAATTGAGACAGG
GACAGGACTTATAAGCTACACGAAACCCGTCTTCATTTCGCTGGCATAAA
GCAACGGAGTAGTCAGAGCCGCAGCAAGGGCTGGTTCTCCCTAGCTCCGT
AGGGACATGAATGCTTGCGGTGGACTGCTCCTTGACCGCGCCGCGTCTTT
TTGACTTCGTTCTCGTGTGTAGACGTCATAGCCCCCTTCACATGTTATGA
CAGGCGTCCTGTATTTCCTCTTTCCGTACTGGAAGATGAACAAGGAAGCA
CCAGCACTTTTACCTTGGATGCTCACACCTCCCTTTCTGCTCAAGTACAG
AATTAGCGACACAAGCGCAATGACCAGCCTCGTCACCGTGATGTCAAAGG
CTGCAGGACCTTGCACAAGACGTGTGCTACCGATGAGCGTCGGAGGGACA
GGCCGCAGACCTCTCACGTCGAGGGCCAGACCCTGCCTAAACTACGCGGC
CGACACCATGAGGGGGACTTTGGTATCGAGACGACTTCTGGTGCGACACG
AGCCATCTTCACTAGTTGGACGTTTACTGGGCGCGCGAGGGAACGGGTGT
GCGCGACGCTCAGGAGTTTGGCTGGGTCCAGACGGAAGAGGTGGCCACTC
TCTCCAGCTGGTGTGCAAGGCGAGCCTGAGCTCGAAGAAAGGGGGACCAA
AGGAAGGGGAGGGACGGGAGGAAGCAGAAACGGAGAGAGAAAAGCAAAAG
CAGCAAGAAGAGGAGCCTATACATGACGATCCGCCGGAGGAGGGGGAGAA
AATAGGTTTCATGCGCGGACTGGCTTATCTAACGGTAGCAGCGATAGCGG
CAGGCTCCCTATATTTCATAGTGGATGAGCTCATGCCAAGTCGCATGAGC
GCTAATTATCTCTTCAACGAAGCCTTTGACGTCGTAAAAGCCAATCATGA
AGTGTTGAATCGGTACGGGGAGCCATTGAAGGGTTACGGGCGTGATGGAG
GGGGTCGGCGGGAGGGTCGCCGCAACTTCGTGGAGCACAAAAATTACGTG
GGGGAAGACGGAAGCAAGCGCCTTCGCATTCGGTTCAACATCGAAGGGCC
CTTTGGCCACGCCTTCGTGTTCGCTGAGGTGACAGCGGACATGCCGAAAG
GGCAGTGGATGTACCTTCTGGTGCAGGACATGCAGACGGGCCGTGTGATG
ACCCTGGAAGACAATCGGGCGATGTACGAGGCAATGTCCAAGTCAGCTTC
ACCGGAAGAGCGGGCGGCTTTGCAGGCTCTCATACAGAGCGGCGGAAGTC
AGCGTTAGGTCAGACGGGGCATGGCGTGCATAGACAAACATGACGGGGCT
GGTGGGCGACATAGCCAGTGGGAGAGACAGACTTGTGGAGATGATGAACT
GTGGAGAGCTGGCAGACACCGCCTCCATCGAGCGGTAAGTTTGTACTTAA
AATTTGCTCACATTCCAAGAAAGCTTTGTCAACGGGGGCGCTAACTCACC
ACGTATAAAGGAATCGTAAAATTTAAAACAAACCAAGCTTGTAGTCAAAC
TGCGTGAGCCTCCGAACTTTCCTTTTCCGTTACACAGTCACTATTATGAG
TGGTCACCTAGCAGACGGGTGAATCAGTTCATGCCTCCACGTGGGTGCTG
CTTGTTTATTTCTTTGACATGGACCGCTCGCTTGGAAGGTAGTACTGCTC
AGTCTGTAAGCCCATTGATTCTCGCAGAGGAGGAACCCAGAAAGGCAAGG
AAAGACCCAGGACGGCAATACCGATGGAAAATGATACGACAGGCTCCCGG
TC back to topprotein sequence of rna253 >rna253-protein ID=rna253-protein|Name=rna253|organism=Nannochloropsis gaditana|type=polypeptide|length=452bp
MAPPAASGASGTGFSGHQNTNNTNIVTRPQNEGDFVTLVLDNGADRMKMG
FAGDPAPRFYIPNCMAKLKGQLQWLIGEDMDSVNNTANLQYTRPFDRGYL
TDWEAEHQIWGRAFGANKAKVDPAQTHLVLTEAPFTPSPLATFSTQVVFE
EFGFAACAKMPAASFSGYRYSLMEKQQQQQLGHQQGEGTGVDAVLVIDSG
FSFTHVVPMYRGKAQRAGVRRVNVGGKLLTNLLKETVSYRQWNMMDEFQL
MNDAKEALCFVSQNFGAEMAKIRPGGGPSRQVRTQEALRRNFVLPDFQTT
MRGYVQDVQVQGHQQTEAEQQVLSMEVERFVVPEVLFRPSDVGLRQGGLP
EAVVEAVEACDIGLRGALYNNIVLTGGNVLFPGFAQRLHTELRIRVPEYY
SVKVQAPPDPIEYAWRGAAHMAQYQPQIFVSKSQYDEYGAEFIQERMFDG
LW back to topmRNA from alignment at CM002455.1:636115..638096+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna253 ID=rna253|Name=rna253|organism=Nannochloropsis gaditana|type=mRNA|length=1982bp|location=Sequence derived from alignment at CM002455.1:636115..638096+ (Nannochloropsis gaditana)
TAGCTTTCAAATGCGTCCTACTTCCTAGGTGGTGCGGGGCTCACAGGGCG
CAGGGACTCACACAGGATCCCGGGGGGCCGGCACTCTGAGCGATGGCACC
ACCGGCTGCCAGCGGAGCCTCTGGCACAGGTTTCTCAGGGCACCAAAATA
CGAACAACACAAACATAGTAACGAGACCTCAAAATGAAGGGGATTTCGTC
ACGCTGGTACTGGACAACGGGGCTGACCGCATGAAAATGGGATTCGCGGG
AGACCCAGCTCCGCGCTTCTACATACCCAATTGTATGGCCAAATTAAAGG
GCCAGTTGCAGGTAAGGAGGGGTTTAGTGGTGTTCTACATGTAATCGTAA
TGTTGGTCAAATGTTCCAgggtaggaagaggggaaactGGATGGAGCAGG
CAGGAAAGTACGTCTCATACGGTTCCAATTATCTCATTGTGACGGGACGA
TAAGCCGTGAAAGTGCCAGTATCTGCACCTGTGGGTGAAAAAGAGAAGCT
CTCACTGCCTCCCCGGCGACCATTTCTGGCTCACCTAGTGGCTCATaggg
gaggacatggactCGGTGAACAACACCGCCAACTTGCAGTACACCCGCCC
ATTCGACCGCGGTTACCTCACCGATTGGGAGGCAGAGCACCAGATCTGGG
GACGAGCATTTGGAGCGAACAAAGCCAAGGTTGGAAACGGAGTGGTATCA
GAaagcgagaaagagggggttGTGCTCAATGGAACGAAGTGTGCATGCGT
TGCTACCTTCCTGTCCGCATAAGTACAGACATCCTTGCCGCGCCTCATGT
TCTTGTTGTAATGGCCCCCTCCACACTTTGCTAAATCTTTTTAAAGCCTC
ACTCGTGTCCATGACGTTTCGGAATGCCGCAAATCTTGCCGCTTGCCGCG
CACTTCCACATTTCACAGGTCGATCCCGCCCAGACTCACCTTGTGTTGAC
AGAGGCCCccttcactccctcgcccctcgccACTTTCAGCACGCAAGTTG
TCTTCGAAGAGTTTGGCTTTGCAGCCTGTGCCAAAATGCcggctgcctcc
ttttcAGGGTACCGATACTCTTTGATGGaaaagcaacagcagcagcagct
agGACACCAACAGGGCGAGGGCACCGGTGTGGATGCCGTTCTGGTCATTG
ACTCTGGCTTCAGCTTCACGCACGTCGTGCCCATGTACCGGGGCAAAGCT
CAGCGTGCAGGCGTGCGGCGCGTGaacgtgggagggaaactTTTGACGAA
CCTGCTCAAGGAGACGGTCTCGTACCGGCAATGGAACATGATGGACGAAT
TTCAGCTCATGAATGACGCGAAGGAGGCTTTGTGCTTCGTTAGTCAAAAT
TTCGGGGCAGAGATGGCCAAAATTCGGCCAGGAGGTGGACCGAGCCGACA
GGTGCGGACGCAGGAGGCTTTGAGGCGTAATTTTGTGCTGCCTGACTTTC
AGACGACCATGCGTGGCTATGTGCAGGACGTGCAAGTCCAGGGACATCAG
CAGACGGAGGCAGAACAGCAGGTTTTAAGCATGGAAGTGGAACGCTTCGT
GGTCCCGGAGGTTCTCTTCAGACCTTCGGATGTAGGCCTCCGCCAGGGTG
GTCTTCCGGAGGCGGTCGTAGAGGCCGTCGAAGCATGCGATATTGGTCTG
CGTGGAGCCTTGTATAACAACATTGTTCTGACTGGTGGAAATGTCTTATT
TCCCGGATTTGCTCAGCGTCTGCACACGGAGCTGCGGATCCGGGTACCGG
AGTATTATTCCGTCAAAGTTCAAGCCCCTCCAGACCCTATTGAATATGCA
TGGCGTGGAGCTGCGCATATGGCTCAATATCAGCCCCAAATTTTTGTAAG
TAAGAGTCAATACGATGAATATGGTGCCGAGTTTATTCAAGAAAGGATGT
TTGACGGACTCTGGTAAACGTGTATTTTCCTGGGTGGAGGAACAATGAAA
AGAAATATAGACACCTCTGGTTCACGGACCTC back to topCoding sequence (CDS) from alignment at CM002455.1:636115..638096+ >rna253 ID=rna253|Name=rna253|organism=Nannochloropsis gaditana|type=CDS|length=4077bp|location=Sequence derived from alignment at CM002455.1:636115..638096+ (Nannochloropsis gaditana)
ATGGCACCACCGGCTGCCAGCGGAGCCTCTGGCACAGGTTTCTCAGGGCA
CCAAAATACGAACAACACAAACATAGTAACGAGACCTCAAAATGAAGGGG
ATTTCGTCACGCTGGTACTGGACAACGGGGCTGACCGCATGAAAATGGGA
TTCGCGGGAGACCCAGCTCCGCGCTTCTACATACCCAATTGTATGGCCAA
ATTAAAGGGCCAGTTGCAGTGGCTCATaggggaggacatggactCGGTGA
ACAACACCGCCAACTTGCAGTACACCCGCCCATTCGACCGCGGTTACCTC
ACCGATTGGGAGGCAGAGCACCAGATCTGGGGACGAGCATTTGGAGCGAA
CAAAGCCAAGGTCGATCCCGCCCAGACTCACCTTGTGTTGACAGAGGCCC
ccttcactccctcgcccctcgccACTTTCAGCACGCAAGTTGTCTTCGAA
GAGTTTGGCTTTGCAGCCTGTGCCAAAATGCcggctgcctccttttcAGG
GTACCGATACTCTTTGATGGaaaagcaacagcagcagcagctagGACACC
AACAGGGCGAGGGCACCGGTGTGGATGCCGTTCTGGTCATTGACTCTGGC
TTCAGCTTCACGCACGTCGTGCCCATGTACCGGGGCAAAGCTCAGCGTGC
AGGCGTGCGGCGCGTGaacgtgggagggaaactTTTGACGAACCTGCTCA
AGGAGACGGTCTCGTACCGGCAATGGAACATGATGGACGAATTTCAGCTC
ATGAATGACGCGAAGGAGGCTTTGTGCTTCGTTAGTCAAAATTTCGGGGC
AGAGATGGCCAAAATTCGGCCAGGAGGTGGACCGAGCCGACAGGTGCGGA
CGCAGGAGGCTTTGAGGCGTAATTTTGTGCTGCCTGACTTTCAGACGACC
ATGCGTGGCTATGTGCAGGACGTGCAAGTCCAGGGACATCAGCAGACGGA
GGCAGAACAGCAGGTTTTAAGCATGGAAGTGGAACGCTTCGTGGTCCCGG
AGGTTCTCTTCAGACCTTCGGATGTAGGCCTCCGCCAGGGTGGTCTTCCG
GAGGCGGTCGTAGAGGCCGTCGAAGCATGCGATATTGGTCTGCGTGGAGC
CTTGTATAACAACATTGTTCTGACTGGTGGAAATGTCTTATTTCCCGGAT
TTGCTCAGCGTCTGCACACGGAGCTGCGGATCCGGGTACCGGAGTATTAT
TCCGTCAAAGTTCAAGCCCCTCCAGACCCTATTGAATATGCATGGCGTGG
AGCTGCGCATATGGCTCAATATCAGCCCCAAATTTTTGTAAGTAAGAGTC
AATACGATGAATATGGTGCCGAGTTTATTCAAGAAAGGATGTTTGACGGA
CTCTGGTAAATGGCACCACCGGCTGCCAGCGGAGCCTCTGGCACAGGTTT
CTCAGGGCACCAAAATACGAACAACACAAACATAGTAACGAGACCTCAAA
ATGAAGGGGATTTCGTCACGCTGGTACTGGACAACGGGGCTGACCGCATG
AAAATGGGATTCGCGGGAGACCCAGCTCCGCGCTTCTACATACCCAATTG
TATGGCCAAATTAAAGGGCCAGTTGCAGTGGCTCATaggggaggacatgg
actCGGTGAACAACACCGCCAACTTGCAGTACACCCGCCCATTCGACCGC
GGTTACCTCACCGATTGGGAGGCAGAGCACCAGATCTGGGGACGAGCATT
TGGAGCGAACAAAGCCAAGGTCGATCCCGCCCAGACTCACCTTGTGTTGA
CAGAGGCCCccttcactccctcgcccctcgccACTTTCAGCACGCAAGTT
GTCTTCGAAGAGTTTGGCTTTGCAGCCTGTGCCAAAATGCcggctgcctc
cttttcAGGGTACCGATACTCTTTGATGGaaaagcaacagcagcagcagc
tagGACACCAACAGGGCGAGGGCACCGGTGTGGATGCCGTTCTGGTCATT
GACTCTGGCTTCAGCTTCACGCACGTCGTGCCCATGTACCGGGGCAAAGC
TCAGCGTGCAGGCGTGCGGCGCGTGaacgtgggagggaaactTTTGACGA
ACCTGCTCAAGGAGACGGTCTCGTACCGGCAATGGAACATGATGGACGAA
TTTCAGCTCATGAATGACGCGAAGGAGGCTTTGTGCTTCGTTAGTCAAAA
TTTCGGGGCAGAGATGGCCAAAATTCGGCCAGGAGGTGGACCGAGCCGAC
AGGTGCGGACGCAGGAGGCTTTGAGGCGTAATTTTGTGCTGCCTGACTTT
CAGACGACCATGCGTGGCTATGTGCAGGACGTGCAAGTCCAGGGACATCA
GCAGACGGAGGCAGAACAGCAGGTTTTAAGCATGGAAGTGGAACGCTTCG
TGGTCCCGGAGGTTCTCTTCAGACCTTCGGATGTAGGCCTCCGCCAGGGT
GGTCTTCCGGAGGCGGTCGTAGAGGCCGTCGAAGCATGCGATATTGGTCT
GCGTGGAGCCTTGTATAACAACATTGTTCTGACTGGTGGAAATGTCTTAT
TTCCCGGATTTGCTCAGCGTCTGCACACGGAGCTGCGGATCCGGGTACCG
GAGTATTATTCCGTCAAAGTTCAAGCCCCTCCAGACCCTATTGAATATGC
ATGGCGTGGAGCTGCGCATATGGCTCAATATCAGCCCCAAATTTTTGTAA
GTAAGAGTCAATACGATGAATATGGTGCCGAGTTTATTCAAGAAAGGATG
TTTGACGGACTCTGGTAAATGGCACCACCGGCTGCCAGCGGAGCCTCTGG
CACAGGTTTCTCAGGGCACCAAAATACGAACAACACAAACATAGTAACGA
GACCTCAAAATGAAGGGGATTTCGTCACGCTGGTACTGGACAACGGGGCT
GACCGCATGAAAATGGGATTCGCGGGAGACCCAGCTCCGCGCTTCTACAT
ACCCAATTGTATGGCCAAATTAAAGGGCCAGTTGCAGTGGCTCATagggg
aggacatggactCGGTGAACAACACCGCCAACTTGCAGTACACCCGCCCA
TTCGACCGCGGTTACCTCACCGATTGGGAGGCAGAGCACCAGATCTGGGG
ACGAGCATTTGGAGCGAACAAAGCCAAGGTCGATCCCGCCCAGACTCACC
TTGTGTTGACAGAGGCCCccttcactccctcgcccctcgccACTTTCAGC
ACGCAAGTTGTCTTCGAAGAGTTTGGCTTTGCAGCCTGTGCCAAAATGCc
ggctgcctccttttcAGGGTACCGATACTCTTTGATGGaaaagcaacagc
agcagcagctagGACACCAACAGGGCGAGGGCACCGGTGTGGATGCCGTT
CTGGTCATTGACTCTGGCTTCAGCTTCACGCACGTCGTGCCCATGTACCG
GGGCAAAGCTCAGCGTGCAGGCGTGCGGCGCGTGaacgtgggagggaaac
tTTTGACGAACCTGCTCAAGGAGACGGTCTCGTACCGGCAATGGAACATG
ATGGACGAATTTCAGCTCATGAATGACGCGAAGGAGGCTTTGTGCTTCGT
TAGTCAAAATTTCGGGGCAGAGATGGCCAAAATTCGGCCAGGAGGTGGAC
CGAGCCGACAGGTGCGGACGCAGGAGGCTTTGAGGCGTAATTTTGTGCTG
CCTGACTTTCAGACGACCATGCGTGGCTATGTGCAGGACGTGCAAGTCCA
GGGACATCAGCAGACGGAGGCAGAACAGCAGGTTTTAAGCATGGAAGTGG
AACGCTTCGTGGTCCCGGAGGTTCTCTTCAGACCTTCGGATGTAGGCCTC
CGCCAGGGTGGTCTTCCGGAGGCGGTCGTAGAGGCCGTCGAAGCATGCGA
TATTGGTCTGCGTGGAGCCTTGTATAACAACATTGTTCTGACTGGTGGAA
ATGTCTTATTTCCCGGATTTGCTCAGCGTCTGCACACGGAGCTGCGGATC
CGGGTACCGGAGTATTATTCCGTCAAAGTTCAAGCCCCTCCAGACCCTAT
TGAATATGCATGGCGTGGAGCTGCGCATATGGCTCAATATCAGCCCCAAA
TTTTTGTAAGTAAGAGTCAATACGATGAATATGGTGCCGAGTTTATTCAA
GAAAGGATGTTTGACGGACTCTGGTAA back to top
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