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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100004g132.9222.mrna |
| Orig protein id | gnl|cribi|Naga_100004g132.9222 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002459.1 | supercontig | CM002459.1:512043..513458 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2491 ID=rna2491|Name=rna2491|organism=Nannochloropsis gaditana|type=mRNA|length=1335bp
ATGAAAGATTTTTCCAAACCTACATCTTTCTCTTCGGATCCTACTTTATC
CACAAGAACCCTGCCAGGCACACTATCACTGACTCCACTTCGATTACTTT
TACCGAGAAGTCGTCACCTACGTGGAACAACAACAAAGCAGATGAAAGGG
CATGCTATTTTCTACTTAACAACGTTCAGCTTCTTGGAGATTCGTGGTTT
TTTGCTTCCGCAGAATCGACTTATCATCACTCGGAACGCTTATTCTACGT
GTACGACAGTCGCTGCTACAGCTGCCACATGCCCTTCTTCACCAAGCAAC
AGTTTTATAGGATCAACTTTGACAGATATGCAGCTCGCGTTTGAGGCCGT
GGGCAAGTTTTTTGACAGAATCGAGGGAGTTCAGTTCGAACAAACTAGTG
GCGGAGTTAATAATGTCGGGATGTACGTCCGCTTCTTAGATGGACGGCAC
TACGTCATGCGCATATATAACAATGGTTTCGATCACGCAAGGGTGCACTA
CGAGCATACCATCCTGCAACAATTAAATAAACAAGTACTCAGCTTCCAGG
TGCCGAAAGCCCTTCCGACGCGAGCAGATCCTAGTAAGACGTATGCAGTC
TTGTCGAATGGCGCTGATGCGTGTATTTTTGAAACAATACCTGGAAACCT
TCCCAAGCTGACGTGCGTTCGAGAAATCGGACGTGCCTCCGGTGAACTAT
TAGAAGCCATCCAGAATGTGGATGTGAGTCACTTAGCATGCCCTACAGCG
CCATACTCTCATTTCTATGAAGTTCATCACGCGGTATCCCGAGAGTTATT
TTACCGTGAAATGAATGGCGCTGATTTTGACCCTATTCGTGAAAGCGCTA
TCAAGGCCGTGGCATACATTGAAGACATGGAGAAGAAGCTAGAGCTCTTC
GAAGCTCGAAATTTGCCGAAATGTTTGTTGCATGCTGACCTTCATTATGA
CAATGTGCTGGTAGAAAATGGAAAAGTAACGGGGCTCCTCGATTTCGAAT
TCGCAGCCGTAGATTACCGCGCAATGGAGCTTGCCGTATGTTTGAGTAAG
TATGCTGGTGAACCAAAGGCAAAAAAATATTTTGATGACTTTATTGAAGG
CTATATGATACACGCAAATCTCACCGATGAAGAAATAGAAGCTGTGCCAA
CTCTCGTAAATCTGAGAATATTGAGCAATATTGCGTACTTTGTAGGGCGA
AAAATTGCTGGTGAGGATGATATAAGTTGTATCACCACACGTCTTGAAAA
TTATATGACTCGCGTCGAGTGGGTGTACAAAAATGCTGAGTTAATTGTCA
AAAAATTGAAGTATGAAGTGAAGAGACACGTCTAA back to topprotein sequence of rna2491 >rna2491-protein ID=rna2491-protein|Name=rna2491|organism=Nannochloropsis gaditana|type=polypeptide|length=305bp
MSCKEKGVNLSIPSCSGRSRYTPPLIFIAPHSMLTCSTSSDLVDLLGIRN
LHSGDFSPKVLSRKEASASIMADTAGPSAGKMRKVVFKLLENNDYNPGIT
LGQIRNKLEKKLGDKYPGFDFASFAFKIKSRSVIEDVIHAFEEVAYSGIH
LAPTKGSTSTAANRIAIKAQKVEEKRSFKSSDNSGNVSKKQRTEELSLKE
GRNITGKDTTSGRQQQDPRIQRLAKLAVAMGLMPAIFEGLEDVDDEEKVK
MLRHRLKTKGAVFDNLPSIEQIKAAQASNSPQRVSQSIDSNRDEVLGDGA
TTISS back to topmRNA from alignment at CM002459.1:512043..513458+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2491 ID=rna2491|Name=rna2491|organism=Nannochloropsis gaditana|type=mRNA|length=1416bp|location=Sequence derived from alignment at CM002459.1:512043..513458+ (Nannochloropsis gaditana)
AACGACCCTACTGAAGGGACTGATAAAATGACAGCCCTTACGACGCTATC
GCCATCAGAAGCGTGGGTTCATGTCTTGCAAGGAGAAAGGTGTCAATTTA
AGCATTCCCTCTTGTTCAGGCCGCTCAAGATATACACCTCCTTTAATTTT
TATTGCTCCCCATAGCATGCTAACCTGCTCCACCTCTTCAGATCTCGTTG
ACCTATTAGGAATAAGAAACCTTCACTCGGGTGACTTTTCGCCCAAAGTT
TTATCTCGAAAGGAAGCTAGCGCCAGTATCATGGCTGATACCGCTGGTCC
ATCCgcggggaagatgaggaaggtCGTTTTCAAACTTTTAGAAAACAACG
ATTACAATCCTGGTATAACATTGGGCCAAATTCGCAATAAACTTGAAAAG
AAGCTCGGAGATAAGTACCCAGGCTTCGATTTTGCGTCTTTCGCATTCAA
AATAAAATCACGAAGCGTCATCGAGGACGTTATTCATGCCTTCGAGGAGG
TAGCGTACTCCGGTATTCATCTGGCTCCGACCAAAGGCAGTACATCCACC
GCAGCCAACAGGATCGCAATCAAAGCCCAGAAAGTAGAAGAGAAGCGGTC
ATTCAAATCCAGCGACAACTCGGGAAATGTAAGCAAGAAGCAAAGAACAG
AGGAACTCAGCCTAAAAGAAGGTAGAAATATCACAGGGAAGGATACGACT
TctgggcggcagcagcaagatCCTCGAATCCAGCGTTTAGCAAAGCTTGC
GGTGGCGATGGGCCTCATGCCTGCCATTTTTGAAGGCCTAGAGGATGTGG
ATGACGAAGAAAAAGTAAAAATGTTGCGCCACCGGttgaagacgaaggga
gcAGTGTTCGATAATCTGCCATCTATCGAACAGATCAAAGCTGCACAGGC
AAGCAATAGCCCGCAAAGAGTTTCGCAAAGCATAGACTCGAACCGTGATG
AAGTTTTGGGGGACGGTGCTACCACCATTTCGAGTTAAGTAAATGTTCCA
AGCACTTTGTGCTCATCTGCGCAAGATTCGAGTGATTCAAAGATGAAACA
AAGAGAGCACTGAAAGCAGATTCCAGAGGGTGCTGAATGCTCCAGTGCAA
GCACTATTAATGTCAGACCGAGGAGTTTGACAGGAAAGGTCGGGGTATGA
GAAAGCTGTACTTCATTTGAAGAGAAAGTTCGAGACACTTAATTTGCCTA
CAGGCAAAGAAAAGGGCAATCATAAGGAAGTACGAAattgtctttcttct
tctcttcctcttttggTGCTTTTGATTGCATAATTTGTTGCAACGAGTAA
TTGTTCCGTACGGTTTGTGGTTGTTTCTCCCATCCAATCCGGGCATACAT
ATGCAACAAAAAAAATGTCATAGACACGAAGCAAACCTTAATAGAATCAC
GCGTGGTATAACCTCA back to topCoding sequence (CDS) from alignment at CM002459.1:512043..513458+ >rna2491 ID=rna2491|Name=rna2491|organism=Nannochloropsis gaditana|type=CDS|length=918bp|location=Sequence derived from alignment at CM002459.1:512043..513458+ (Nannochloropsis gaditana)
ATGTCTTGCAAGGAGAAAGGTGTCAATTTAAGCATTCCCTCTTGTTCAGG
CCGCTCAAGATATACACCTCCTTTAATTTTTATTGCTCCCCATAGCATGC
TAACCTGCTCCACCTCTTCAGATCTCGTTGACCTATTAGGAATAAGAAAC
CTTCACTCGGGTGACTTTTCGCCCAAAGTTTTATCTCGAAAGGAAGCTAG
CGCCAGTATCATGGCTGATACCGCTGGTCCATCCgcggggaagatgagga
aggtCGTTTTCAAACTTTTAGAAAACAACGATTACAATCCTGGTATAACA
TTGGGCCAAATTCGCAATAAACTTGAAAAGAAGCTCGGAGATAAGTACCC
AGGCTTCGATTTTGCGTCTTTCGCATTCAAAATAAAATCACGAAGCGTCA
TCGAGGACGTTATTCATGCCTTCGAGGAGGTAGCGTACTCCGGTATTCAT
CTGGCTCCGACCAAAGGCAGTACATCCACCGCAGCCAACAGGATCGCAAT
CAAAGCCCAGAAAGTAGAAGAGAAGCGGTCATTCAAATCCAGCGACAACT
CGGGAAATGTAAGCAAGAAGCAAAGAACAGAGGAACTCAGCCTAAAAGAA
GGTAGAAATATCACAGGGAAGGATACGACTTctgggcggcagcagcaaga
tCCTCGAATCCAGCGTTTAGCAAAGCTTGCGGTGGCGATGGGCCTCATGC
CTGCCATTTTTGAAGGCCTAGAGGATGTGGATGACGAAGAAAAAGTAAAA
ATGTTGCGCCACCGGttgaagacgaagggagcAGTGTTCGATAATCTGCC
ATCTATCGAACAGATCAAAGCTGCACAGGCAAGCAATAGCCCGCAAAGAG
TTTCGCAAAGCATAGACTCGAACCGTGATGAAGTTTTGGGGGACGGTGCT
ACCACCATTTCGAGTTAA back to top
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