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Properties
| Property Name | Value |
|---|
| Product | aminoglycoside phosphotransferase |
| Orig transcript id | gnl|cribi|Naga_100004g131.9205.mrna |
| Orig protein id | gnl|cribi|Naga_100004g131.9205 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002459.1 | supercontig | CM002459.1:510225..511931 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2490 ID=rna2490|Name=rna2490|organism=Nannochloropsis gaditana|type=mRNA|length=3104bp
CGCTCTAAGATACGCTGGTCTCGCAGGTGTGGATTATCGGGTCAATCCAG
ACTGAACGAAGGTCGTCGCACCGACAACATGGTCTGGAGATTTAGAAGCT
ATCGCATCGGATGCACCGGACTCTTGTGGAGAAGACAGGCTTACCCATCC
CTCTATCGTTCCTGTGCGTCACTGTGTATTGTCTGTGAGTGGTGTCAGAA
ATCTGCTGGGCCTCGGCCGGTTCGACCTCATGATATTTGAGCCTTGCACA
CCAGGTGCATAGCGGGGTGTTTTTTAATTGCTTATTGACAGTGATTTCAG
TGTGGCCCCAATTTTGTGCGGGCAGGAGGCGGTCGACGAATGGTGCACGA
GTGATGGATGAGCAAGAGTTATGACGAAAGCTCACTTGGGAAACTACAAG
AGGCACATCATGTCGATCGATGTTTTGCATATTTCACTTTCTTAAGTTGC
TAAAATGCCTCTTGATTATTCCCGGGACGGGCGAATTAATACAGCTTGGC
AACGCGCAAGTATGAAGACTGCTTTTGTTCTCGCTACTTTCTTCTGTGGC
GTCCACGGATTTTTGGTGCCTGGCATCCCTTCTGCCTCAGTGGCGCGCAC
CAACAGCGGGCGAATCGTCACCAAGATGGCTGAAGCCGTGGGTGAAGAGC
CCTTTGTTCCTGATATGGACCGGCGCAAGCTTATGAACACGATCCTGTTG
GGCTCTGTGGGCCTGAATGTGGCGGGTCTGGCGGTGCCCTACATTGCCTT
CTTTGTGCCCCGCACAGGTGGTGGGGCCGGTGGGGGGCTGGCAGCAAAAG
ATGCACTTGGAGATGATGTAACCGTGCAAGGCTGGTTGTCGACACATCAA
GCGGGTGACCGAAGCTTGGTGCAGGGCCTGAAAGGCGATGCCACCTATCT
AATTGTGAAGGAGGACAAGACCATTGAGAATTACGGTCTTAACGCTGTCT
GTACGCATCTAGGTTGTGTTGTACCCTGGAACAAAGCTGAAAGCAAATTT
ATTTGCCCGTGCCACGGCTCCCAGTATGACAAGACAGGGAAGGTCGTGCG
TGGCCCTGCACCGCTTTCTCTCGCCTTGGCGCATGTTAAGGAAAGTGATG
GGAAAGTCCTCCTCACTCCTTGGACAGAAACTGATTTTCGAACGGACACA
GCCCCTTGGTGGAAGTAGGCTGAACACATGGTATCTTACGGAAGTGTGTT
AATTGGTCACGGGGGAAGCAAGGAAGATAGAGCCCGCGCGTTCATCGACG
GAAGGAAACTATGAAGGAAACCATGTTTAACCCTGGAATGCTCTAGATGA
GAGTTGTGGGCTGACGCCAGGCAGGATCGGGTCCATTGTGTACAAAGCGC
ACCCATGAGTGCTTGTCTGTGATGGAGCGTCTGGTCATCTGGAGTCGGCT
GCTTTGAAGGTCTTACTGTTCCTCTTAAACATGGCTTGTGAAGAAGGCAG
TGACAATGCGTCTTGAAAGGGCAAGAGACAAAGCTATATCAGTCACATCT
TTTTAGTTTTCTCGCTGTCGCTGTGATATAAAAACAAAATGCTATCAAAC
AACATCTAGTTGAGACAACGAGGCCACACTGCCTAACAAATCGGTGATTC
TCGTGGTATGGTGATGGTCGTTGACGGCTAGTGAGGATCCGAAAAGCTCT
ACAAGGCCCGTCCAGCGACAGCGCTATCTCCGCCCCTTGCACAAGCGAGC
GCTAGAACGACACACGTCGTCGACTCGCCGATCTCATCCACCTGGCAGTC
CGTCCAAATCACGCATTACTAAGATTGTAATCGAGACCTTCGGTGACTCT
TAGAATACAAAAATATCAGGAGCTTGATATGGGGCAAAACGCTTACGAGA
AGATCCAGATGGCCTTGTCATGGCCAAATACATCTCCATAAGGGTAGATC
GCTCGCCTACTTTCGAGATGCATGCAAGTTGAAAAAATCATTCGAGTTTC
AGCACGAAAAAAAGTGCGTTTCGTAAATACAAAGGTTTCCCGAAACATAT
ACCTATCGAATGAATTTATCTTGTTTTGATCACCTGCATTACATCGATTT
TATACTTTAGCGTACCCTAGCATCCTTCTTGGATAATGCTTGAATAGACA
TCTTCGTCAGGGTTTTTTTCTCCTCCCCCTTACCTGATGCATTCTTTCTA
ATATACTCTTCGTCGTCAATATTCTGAAACTCCATCTCCTTCTGCCCATT
TCTTTCGAAAAGAATATCTCATCTTTCTTGTGTCATTCTTCAACGTTCGA
TTTTTCATATCTCTTCGACGTCGCCACCCTTCCATCCCTCGATATTTTGA
GTACTTTCTGAGTCTCTATCCAAATTTGCGAGATCTCTGAAATCTTAAAC
ATTCCTTACACTGCTGAGCTGTCAACTTCTGATACCGTAACAATAAAACG
AGATCCACGGCAATAATGAGAAAGGCCACAAACGTCATGGCAACTGGCAA
AAAGCCCCCCAGTTGATCAACAGGGAGTAAAGTAATGCCTATGGCTGTAG
GGACAATGCTCATAAACGATCAAAGCAGGTGGTAATATAAAGTGCAAGTT
GTCTACCCTGTATAGAATCTTGCAAGACGAGTCCTGAAAATAGATCGAAT
AAATTATTGCTCTCTTATCAGATAAGGGGCATGGCTAATACGAGAATGCG
AAAGAGACTCGAACGCAAGTCAAGGATTCAAATAAAAGAGCATACAGCAT
GGGATGCTGCATCGTAGAATATTCCAGCTTTGACACGCGCGTGCTGACCT
TAAAACGCTGGCTACACAGTTGCAACAGAGTTTTGGAGTGAACAGGTGTA
GATACATGTTTTGAACAAGGCAAGGACAGGAGCATGCTGAAAAGGAGAAA
TCAGACGAGGATGTAAGCAAGTTCTCTTTTCTCTGATCTTTTCAGACACT
CGGTCGAAATATCCACGCACTGAAGAGTGTTCGATCGTAGACGAAAGTGA
TGCACATGAGGGTGTATAAAGTAATATTCAAGCTATCGACTCACTGAAGG
TACCTAAGATGGAGATGAAGCCTCTGAAAGGGTCAACCCCGTGAATAAAC
ACAAAGTAAATATTATGTTAACCGAAAAGGATTTCACTCAACGCAGGGTA
CTGA back to topprotein sequence of rna2490 >rna2490-protein ID=rna2490-protein|Name=rna2490|organism=Nannochloropsis gaditana|type=polypeptide|length=444bp
MKDFSKPTSFSSDPTLSTRTLPGTLSLTPLRLLLPRSRHLRGTTTKQMKG
HAIFYLTTFSFLEIRGFLLPQNRLIITRNAYSTCTTVAATAATCPSSPSN
SFIGSTLTDMQLAFEAVGKFFDRIEGVQFEQTSGGVNNVGMYVRFLDGRH
YVMRIYNNGFDHARVHYEHTILQQLNKQVLSFQVPKALPTRADPSKTYAV
LSNGADACIFETIPGNLPKLTCVREIGRASGELLEAIQNVDVSHLACPTA
PYSHFYEVHHAVSRELFYREMNGADFDPIRESAIKAVAYIEDMEKKLELF
EARNLPKCLLHADLHYDNVLVENGKVTGLLDFEFAAVDYRAMELAVCLSK
YAGEPKAKKYFDDFIEGYMIHANLTDEEIEAVPTLVNLRILSNIAYFVGR
KIAGEDDISCITTRLENYMTRVEWVYKNAELIVKKLKYEVKRHV back to topmRNA from alignment at CM002459.1:510225..511931- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2490 ID=rna2490|Name=rna2490|organism=Nannochloropsis gaditana|type=mRNA|length=1707bp|location=Sequence derived from alignment at CM002459.1:510225..511931- (Nannochloropsis gaditana)
ATGAAAGATTTTTCCAAACCTACATCTTTCTCTTCGGATCCTACTTTATC
CACAAGAACCCTGCCAGGCACACTATCACTGACTCCACTTCGATTACTTT
TACCGAGAAGTCGTCACCTACGTGGAACAACAACAAAGCAGATGAAAGGG
CATGCTATTTTCTACTTAACAACGTTCAGCTTCTTGGAGATTCGTGGTTT
TTTGCTTCCGCAGAATCGACTTATCATCACTCGGAACGCTTATTCTACGT
GTACGACAGTCGCTGCTACAGCTGCCACATGCCCTTCTTCACCAAGCAAC
AGTTTTATAGGATCAACTTTGACAGATATGCAGCTCGCGTTTGAGGCCGT
GGGCAAGTTTTTTGACAGAATCGAGGGAGTTCAGTTCGAACAAACTAGTG
GCGGAGTTAATAATGTAAGATCGAGTGGGTCAACTAGAGGTACAACACAT
TCCGTTGATATACAAGCTTATGCGCAAAAGACACAAAATCACAGGTCGGG
ATGTACGTCCGCTTCTTAGATGGACGGCACTACGTCATGCGGTGCGTTCG
CATGTTCCTTCTTCCTATGTTCTGCTAAGGGCTCGTTCTGATAGGCGGAG
ATCTGACCCTCAACCACACCTTTACTACCTCTGTATTTTTTACACGTACT
TGTCTTCAATATCTCTTTTCCCACCCTACTTACCATGCTCAGCATATATA
ACAATGGTTTCGATCACGCAAGGGTGCACTACGAGCATACCATCCTGCAA
CAATTAAATAAACAAGTACTCAGCTTCCAGGTGCCGAAAGCCCTTCCGAC
GCGAGCAGATCCTAGTAAGACGTATGCAGTCTTGTCGAATGGCGCTGATG
CGTGTATTTTTGAAACAATACCTGGAAACCTTCCCAAGCTGACGTGCGTT
CGAGAAATCGGACGTGCCTCCGGTGAACTATTAGAAGCCATCCAGAATGT
GGATGTGAGTCACTTAGCATGCCCTACAGCGCCATACTCTCATTTCTATG
AAGTTCATCACGCGGTATCCCGAGAGTTATTTTACCGTGAAATGAATGGC
GCTGATTTTGACCCTATTCGTGAAAGCGCTATCAAGGCCGTGGCATACAT
TGAAGACATGGAGAAGAAGCTAGAGCTCTTCGAAGCTCGAAATTTGCCGA
AATGTTTGTTGCATGCTGACCTTCATTATGACAAGTAAGTACCCTAAACT
TCTCAGGGCTACACGGATGCATTTGAAGTAAAGTATGATATTGCAGGCTT
TTTCCCTGCATTATCGCAATCGCTTTGAGTATTGTTTGGGTAAACGAATG
ACTCGAGAATCTACGAATATTACAGTGTGCTGGTAGAAAATGGAAAAGTA
ACGGGGCTCCTCGATTTCGAATTCGCAGCCGTAGATTACCGCGCAATGGA
GCTTGCCGTATGTTTGAGTAAGTATGCTGGTGAACCAAAGGCAAAAAAAT
ATTTTGATGACTTTATTGAAGGCTATATGATACACGCAAATCTCACCGAT
GAAGAAATAGAAGCTGTGCCAACTCTCGTAAATCTGAGAATATTGAGCAA
TATTGCGTACTTTGTAGGGCGAAAAATTGCTGGTGAGGATGATATAAGTT
GTATCACCACACGTCTTGAAAATTATATGACTCGCGTCGAGTGGGTGTAC
AAAAATGCTGAGTTAATTGTCAAAAAATTGAAGTATGAAGTGAAGAGACA
CGTCTAA back to topCoding sequence (CDS) from alignment at CM002459.1:510225..511931- >rna2490 ID=rna2490|Name=rna2490|organism=Nannochloropsis gaditana|type=CDS|length=5340bp|location=Sequence derived from alignment at CM002459.1:510225..511931- (Nannochloropsis gaditana)
TGTGCTGGTAGAAAATGGAAAAGTAACGGGGCTCCTCGATTTCGAATTCG
CAGCCGTAGATTACCGCGCAATGGAGCTTGCCGTATGTTTGAGTAAGTAT
GCTGGTGAACCAAAGGCAAAAAAATATTTTGATGACTTTATTGAAGGCTA
TATGATACACGCAAATCTCACCGATGAAGAAATAGAAGCTGTGCCAACTC
TCGTAAATCTGAGAATATTGAGCAATATTGCGTACTTTGTAGGGCGAAAA
ATTGCTGGTGAGGATGATATAAGTTGTATCACCACACGTCTTGAAAATTA
TATGACTCGCGTCGAGTGGGTGTACAAAAATGCTGAGTTAATTGTCAAAA
AATTGAAGTATGAAGTGAAGAGACACGTCTAACATATATAACAATGGTTT
CGATCACGCAAGGGTGCACTACGAGCATACCATCCTGCAACAATTAAATA
AACAAGTACTCAGCTTCCAGGTGCCGAAAGCCCTTCCGACGCGAGCAGAT
CCTAGTAAGACGTATGCAGTCTTGTCGAATGGCGCTGATGCGTGTATTTT
TGAAACAATACCTGGAAACCTTCCCAAGCTGACGTGCGTTCGAGAAATCG
GACGTGCCTCCGGTGAACTATTAGAAGCCATCCAGAATGTGGATGTGAGT
CACTTAGCATGCCCTACAGCGCCATACTCTCATTTCTATGAAGTTCATCA
CGCGGTATCCCGAGAGTTATTTTACCGTGAAATGAATGGCGCTGATTTTG
ACCCTATTCGTGAAAGCGCTATCAAGGCCGTGGCATACATTGAAGACATG
GAGAAGAAGCTAGAGCTCTTCGAAGCTCGAAATTTGCCGAAATGTTTGTT
GCATGCTGACCTTCATTATGACAAGTCGGGATGTACGTCCGCTTCTTAGA
TGGACGGCACTACGTCATGCGATGAAAGATTTTTCCAAACCTACATCTTT
CTCTTCGGATCCTACTTTATCCACAAGAACCCTGCCAGGCACACTATCAC
TGACTCCACTTCGATTACTTTTACCGAGAAGTCGTCACCTACGTGGAACA
ACAACAAAGCAGATGAAAGGGCATGCTATTTTCTACTTAACAACGTTCAG
CTTCTTGGAGATTCGTGGTTTTTTGCTTCCGCAGAATCGACTTATCATCA
CTCGGAACGCTTATTCTACGTGTACGACAGTCGCTGCTACAGCTGCCACA
TGCCCTTCTTCACCAAGCAACAGTTTTATAGGATCAACTTTGACAGATAT
GCAGCTCGCGTTTGAGGCCGTGGGCAAGTTTTTTGACAGAATCGAGGGAG
TTCAGTTCGAACAAACTAGTGGCGGAGTTAATAATTGTGCTGGTAGAAAA
TGGAAAAGTAACGGGGCTCCTCGATTTCGAATTCGCAGCCGTAGATTACC
GCGCAATGGAGCTTGCCGTATGTTTGAGTAAGTATGCTGGTGAACCAAAG
GCAAAAAAATATTTTGATGACTTTATTGAAGGCTATATGATACACGCAAA
TCTCACCGATGAAGAAATAGAAGCTGTGCCAACTCTCGTAAATCTGAGAA
TATTGAGCAATATTGCGTACTTTGTAGGGCGAAAAATTGCTGGTGAGGAT
GATATAAGTTGTATCACCACACGTCTTGAAAATTATATGACTCGCGTCGA
GTGGGTGTACAAAAATGCTGAGTTAATTGTCAAAAAATTGAAGTATGAAG
TGAAGAGACACGTCTAACATATATAACAATGGTTTCGATCACGCAAGGGT
GCACTACGAGCATACCATCCTGCAACAATTAAATAAACAAGTACTCAGCT
TCCAGGTGCCGAAAGCCCTTCCGACGCGAGCAGATCCTAGTAAGACGTAT
GCAGTCTTGTCGAATGGCGCTGATGCGTGTATTTTTGAAACAATACCTGG
AAACCTTCCCAAGCTGACGTGCGTTCGAGAAATCGGACGTGCCTCCGGTG
AACTATTAGAAGCCATCCAGAATGTGGATGTGAGTCACTTAGCATGCCCT
ACAGCGCCATACTCTCATTTCTATGAAGTTCATCACGCGGTATCCCGAGA
GTTATTTTACCGTGAAATGAATGGCGCTGATTTTGACCCTATTCGTGAAA
GCGCTATCAAGGCCGTGGCATACATTGAAGACATGGAGAAGAAGCTAGAG
CTCTTCGAAGCTCGAAATTTGCCGAAATGTTTGTTGCATGCTGACCTTCA
TTATGACAAGTCGGGATGTACGTCCGCTTCTTAGATGGACGGCACTACGT
CATGCGATGAAAGATTTTTCCAAACCTACATCTTTCTCTTCGGATCCTAC
TTTATCCACAAGAACCCTGCCAGGCACACTATCACTGACTCCACTTCGAT
TACTTTTACCGAGAAGTCGTCACCTACGTGGAACAACAACAAAGCAGATG
AAAGGGCATGCTATTTTCTACTTAACAACGTTCAGCTTCTTGGAGATTCG
TGGTTTTTTGCTTCCGCAGAATCGACTTATCATCACTCGGAACGCTTATT
CTACGTGTACGACAGTCGCTGCTACAGCTGCCACATGCCCTTCTTCACCA
AGCAACAGTTTTATAGGATCAACTTTGACAGATATGCAGCTCGCGTTTGA
GGCCGTGGGCAAGTTTTTTGACAGAATCGAGGGAGTTCAGTTCGAACAAA
CTAGTGGCGGAGTTAATAATTGTGCTGGTAGAAAATGGAAAAGTAACGGG
GCTCCTCGATTTCGAATTCGCAGCCGTAGATTACCGCGCAATGGAGCTTG
CCGTATGTTTGAGTAAGTATGCTGGTGAACCAAAGGCAAAAAAATATTTT
GATGACTTTATTGAAGGCTATATGATACACGCAAATCTCACCGATGAAGA
AATAGAAGCTGTGCCAACTCTCGTAAATCTGAGAATATTGAGCAATATTG
CGTACTTTGTAGGGCGAAAAATTGCTGGTGAGGATGATATAAGTTGTATC
ACCACACGTCTTGAAAATTATATGACTCGCGTCGAGTGGGTGTACAAAAA
TGCTGAGTTAATTGTCAAAAAATTGAAGTATGAAGTGAAGAGACACGTCT
AACATATATAACAATGGTTTCGATCACGCAAGGGTGCACTACGAGCATAC
CATCCTGCAACAATTAAATAAACAAGTACTCAGCTTCCAGGTGCCGAAAG
CCCTTCCGACGCGAGCAGATCCTAGTAAGACGTATGCAGTCTTGTCGAAT
GGCGCTGATGCGTGTATTTTTGAAACAATACCTGGAAACCTTCCCAAGCT
GACGTGCGTTCGAGAAATCGGACGTGCCTCCGGTGAACTATTAGAAGCCA
TCCAGAATGTGGATGTGAGTCACTTAGCATGCCCTACAGCGCCATACTCT
CATTTCTATGAAGTTCATCACGCGGTATCCCGAGAGTTATTTTACCGTGA
AATGAATGGCGCTGATTTTGACCCTATTCGTGAAAGCGCTATCAAGGCCG
TGGCATACATTGAAGACATGGAGAAGAAGCTAGAGCTCTTCGAAGCTCGA
AATTTGCCGAAATGTTTGTTGCATGCTGACCTTCATTATGACAAGTCGGG
ATGTACGTCCGCTTCTTAGATGGACGGCACTACGTCATGCGATGAAAGAT
TTTTCCAAACCTACATCTTTCTCTTCGGATCCTACTTTATCCACAAGAAC
CCTGCCAGGCACACTATCACTGACTCCACTTCGATTACTTTTACCGAGAA
GTCGTCACCTACGTGGAACAACAACAAAGCAGATGAAAGGGCATGCTATT
TTCTACTTAACAACGTTCAGCTTCTTGGAGATTCGTGGTTTTTTGCTTCC
GCAGAATCGACTTATCATCACTCGGAACGCTTATTCTACGTGTACGACAG
TCGCTGCTACAGCTGCCACATGCCCTTCTTCACCAAGCAACAGTTTTATA
GGATCAACTTTGACAGATATGCAGCTCGCGTTTGAGGCCGTGGGCAAGTT
TTTTGACAGAATCGAGGGAGTTCAGTTCGAACAAACTAGTGGCGGAGTTA
ATAATTGTGCTGGTAGAAAATGGAAAAGTAACGGGGCTCCTCGATTTCGA
ATTCGCAGCCGTAGATTACCGCGCAATGGAGCTTGCCGTATGTTTGAGTA
AGTATGCTGGTGAACCAAAGGCAAAAAAATATTTTGATGACTTTATTGAA
GGCTATATGATACACGCAAATCTCACCGATGAAGAAATAGAAGCTGTGCC
AACTCTCGTAAATCTGAGAATATTGAGCAATATTGCGTACTTTGTAGGGC
GAAAAATTGCTGGTGAGGATGATATAAGTTGTATCACCACACGTCTTGAA
AATTATATGACTCGCGTCGAGTGGGTGTACAAAAATGCTGAGTTAATTGT
CAAAAAATTGAAGTATGAAGTGAAGAGACACGTCTAACATATATAACAAT
GGTTTCGATCACGCAAGGGTGCACTACGAGCATACCATCCTGCAACAATT
AAATAAACAAGTACTCAGCTTCCAGGTGCCGAAAGCCCTTCCGACGCGAG
CAGATCCTAGTAAGACGTATGCAGTCTTGTCGAATGGCGCTGATGCGTGT
ATTTTTGAAACAATACCTGGAAACCTTCCCAAGCTGACGTGCGTTCGAGA
AATCGGACGTGCCTCCGGTGAACTATTAGAAGCCATCCAGAATGTGGATG
TGAGTCACTTAGCATGCCCTACAGCGCCATACTCTCATTTCTATGAAGTT
CATCACGCGGTATCCCGAGAGTTATTTTACCGTGAAATGAATGGCGCTGA
TTTTGACCCTATTCGTGAAAGCGCTATCAAGGCCGTGGCATACATTGAAG
ACATGGAGAAGAAGCTAGAGCTCTTCGAAGCTCGAAATTTGCCGAAATGT
TTGTTGCATGCTGACCTTCATTATGACAAGTCGGGATGTACGTCCGCTTC
TTAGATGGACGGCACTACGTCATGCGATGAAAGATTTTTCCAAACCTACA
TCTTTCTCTTCGGATCCTACTTTATCCACAAGAACCCTGCCAGGCACACT
ATCACTGACTCCACTTCGATTACTTTTACCGAGAAGTCGTCACCTACGTG
GAACAACAACAAAGCAGATGAAAGGGCATGCTATTTTCTACTTAACAACG
TTCAGCTTCTTGGAGATTCGTGGTTTTTTGCTTCCGCAGAATCGACTTAT
CATCACTCGGAACGCTTATTCTACGTGTACGACAGTCGCTGCTACAGCTG
CCACATGCCCTTCTTCACCAAGCAACAGTTTTATAGGATCAACTTTGACA
GATATGCAGCTCGCGTTTGAGGCCGTGGGCAAGTTTTTTGACAGAATCGA
GGGAGTTCAGTTCGAACAAACTAGTGGCGGAGTTAATAAT back to top
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