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Properties
| Property Name | Value |
|---|
| Product | metal-dependent amidohydrolase 3 |
| Orig transcript id | gnl|cribi|Naga_100004g126.9147.mrna |
| Orig protein id | gnl|cribi|Naga_100004g126.9147 |
| Gbkey | mRNA |
| Note | encoded by transcript variant 1; alternatively spliced |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002459.1 | supercontig | CM002459.1:497666..500116 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2485 ID=rna2485|Name=rna2485|organism=Nannochloropsis gaditana|type=mRNA|length=2222bp
CCTGACCCCCCCTGGGTACCCTTTGTCTTTACCCCCCGAAACAAAGAATG
TTGAGGCTATTATACAATGTCAACGCTTCCACTTGTTTTTTTTTGTCTAC
ATCTGTACATTATCCTCCAGTGAAAACCATGCTGCTGTTAAAAAATGCCT
GCTTTTGGCAATGGGATCCCGACACGCTCCCCTTCTCGGGCCGCTTAGCG
GAAGGCTGGTGCCTGATCGACGATGTGCGGGGAGTCTTCGACACAGTGTT
CTGCGAAGACAACTTATGTATAGATGATCAAAGATCGGCCTACGAGCAGG
CCCAAGCGCAGGCAACGAGAGTTATCGATATGAAATGCAACGAGGGCAAC
ATCTTGCTTCCTGGCTTGATTGACTCGCATATACATGTGGGATACATGGG
GGAGGCCTGCGAGTACTTGCAATTGCGTGGAACTCGTAGTCTTGATGATC
TAAGTACTGCAGTCCGAAACTATGGTAAGGAAAACCCGAAGAAAAGCTGG
ATCATCGGTGTCGGATGGGATCAGTCAGGTTGGGGAGGTTGTTACCCTAC
CAGGCAAGTCCTCGATGAGGCGATGCGAGAGGACAAGCGACCGCTCGTAT
TATACCGAGAATGCTGGCATATCGTTGTTGCTAACACAGCCGCCTTACAA
CGGGCTGGAATCCGGCTCACACCGACGAATGAGCACTTCTCTGGCGTTGA
CCTTGATGCCTCAGGAGTTCCGACAGGCATCTTTAGAGAAACAGCTGTCC
TTCTCATCACAAACCATATTGCGGAAAACAATGAAAAGTTGCGCGAAGTT
TATATTCGAAATGCGCTGAACAATTGTCTCAGGGCAGGGCTAACCGCGGT
TCAGACGAATGACATCAAAGCTTGGAATATCTACCAAAATCTGGAGGCCA
AGGGAGAGCTTCCATTGCGAGTTTTTTTAACGATCAACTATGAAGAGTTT
GAAGAAGAAGGAAAGCAACCCAATTTCCACACCCTCAATAGCAAGCCGCC
TCTATTCACCTGTCGGCGTATCAAGCTTTATTCGGACGGTTCTTTGGGCG
CTGAAACGGCCGCATTGCGTTCTCCTTATCCAGGTAGCACAAACAGGGGG
CTTCTCATCCACAATGTGGAGGATCTTGCAGCAAAGATCTGCCATTCCCA
CGAGGCAGGGTTTCAGCTAGAGGTGCACGCAATAGGGGATCGGGCTTTGT
CCACTGTCCTCGAGGCGTTAAAACGGGCCCGGATTAAGCCTGGTGCCCGG
CCTGTGATAACGCATTGCCAGGTTCTGGGAGAAGATCTTATAAATCGCAT
GGCCAAACAGGGTGTGGTTGCCAGTATACAGCCCTCCTTCGTGGGGACAG
ACTGTCAATGGATTCAGGAGCGTTTGCCATCCCATGTCCTAAAGACATCT
TATTGCTGGAAGAGTTTGTTGGAAAATGGAGTGTATTGTGCTGGAGGCTC
AGACTCACCTGTGGAAGGGTGCGAGCCGCTAAGCGGCATATACGATGCCA
TGCACAGGTTGTCTCATGCTAGCAAATTGACGGCTCGGAAAAAAAAAGAC
ACCACCTCGACCACCAGCGGTGTCGACGAAAGTTCCTTTTTACCCCGTGA
ATGTTTGACTTTCACCGAGGCTCTCCACTTGTATACCATTGGCGGGGCCT
ACGCCTGTCATATGGAGAAACACCTCGGCCGGATAGCGCCGGGGTATCAG
GCAGACTTGGTGGTGGTAGATAGGGATGTGACGGGGCCTCGCGGAGAGGA
CACATGTCATGCGCTCCTTGAGGCAGCGATCAAAGAGGTATGGGTAGGAG
GGATATGCCGCTTTGACAAAATGGAGGAAGAGGGCCCTCGAAGGAAGGGA
ACAGAGCGGGATTTAAAATTACGAGAAAACTTGAAAGGGCCTTACATTCC
CGGGAAAAACGGTCCAACGGGACATCAAAAGCCGGTTGGGTCACTGATCC
TGGGCGGCAAAAGACTGGGTATAGGTTGTTGTGGGCGGTGAGATAGCGAT
ATGTCGAGATCGCATGCAAGAGCCCATAGCAGTGTCTTGTTTTAATGTGC
TTGTATACTGAAAGTACTCTTCATCAAAGTTCAATGTCTGTTACCCAAAA
TTTGACCTTGCTCGCTCTGACTTCTCTCCCTTTTACATTATAATGCATTT
GATTGCCGTTGTGTGAAAATCCATTTGAGGAGGACAGTCACTGATAGAGC
CAGTTTTGATGCGCCGTTTTCG back to topprotein sequence of rna2485 >rna2485-protein ID=rna2485-protein|Name=rna2485|organism=Nannochloropsis gaditana|type=polypeptide|length=648bp
MLRLLYNVNASTCFFLSTSVHYPPVKTMLLLKNACFWQWDPDTLPFSGRL
AEGWCLIDDVRGVFDTVFCEDNLCIDDQRSAYEQAQAQATRVIDMKCNEG
NILLPGLIDSHIHVGYMGEACEYLQLRGTRSLDDLSTAVRNYGKENPKKS
WIIGVGWDQSGWGGCYPTRQVLDEAMREDKRPLVLYRECWHIVVANTAAL
QRAGIRLTPTNEQHFSGVDLDASGVPTGIFRETAVLLITNHIAENNEKLR
EVYIRNALNNCLRAGLTAVQTNDIKAWNIYQNLEAKGELPLRVFLTINYE
EFEEEGKQPNFHTLNSKPPLFTCRRIKLYSDGSLGAETAALRSPYPGSTN
RGLLIHNVEDLAAKICHSHEAGFQLEVHAIGDRALSTVLEALKRARIKPG
ARPVITHCQVLGEDLINRMAKQGVVASIQPSFVGTDCQWIQERLPSHVLK
TSYCWKSLLENGVYCAGGSDSPVEGCEPLSGIYDAMHRLSHASKLTARKK
KDTTSTTSGVDESSFLPRECLTFTEALHLYTIGGAYACHMEKHLGRIAPG
YQADLVVVDRDVTGPRGEDTCHALLEAAIKEVWVGGICRFDKMEEEGPRR
KGTERDLKLRENLKGPYIPGKNGPTGHQKPVGSLILGGKRLGIGCCGR back to topmRNA from alignment at CM002459.1:497666..500116- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2485 ID=rna2485|Name=rna2485|organism=Nannochloropsis gaditana|type=mRNA|length=2451bp|location=Sequence derived from alignment at CM002459.1:497666..500116- (Nannochloropsis gaditana)
CCTGACCCCCCCTGGGTACCCTTTGTCTTTACCCCCCGAAACAAAGAATG
TTGAGGCTATTATACAATGTCAACGCTTCCACTTGTTTTTTTTTGTCTAC
ATCTGTACATTATCCTCCAGTGAAAACCATGCTGCTGTTAAAAAATGCCT
GCTTTTGGCAATGGGATCCCGACACGCTCCCCTTCTCGGGCCGCTTAGCG
GAAGGCTGGTGCCTGATCGACGATGTGCGGGGAGTCTTCGACACAGTGTT
CTGCGAAGACAACTTATGTATAGATGATCAAAGATCGGCCTACGAGCAGG
CCCAAGCGCAGGCAACGAGAGTTATCGATATGAAATGCAACGAGGGCAAC
ATCTTGCTTCCTGGCTTGATTGACTCGCATATACATGTGGGATACATGGG
GGAGGCCTGCGAGTACTTGCAATTGCGTGGAACTCGTAGTCTTGATGATC
TAAGTACTGCAGTCCGAAACTATGGTAAGGAAAACCCGAAGAAAAGCTGG
ATCATCGGTGTCGGATGGGATCAGTCAGGTTGGGGAGGTTGTTACCCTAC
CAGGCAAGTCCTCGATGAGGCGATGCGAGAGGACAAGCGACCGCTCGTAT
TATACCGAGAATGCTGGCATATCGTTGTTGCTAACACAGCCGCCTTACAA
CGGGCTGGAATCCGGCTCACACCGACGAATGAGGTAAGCATTTGTAATAC
TTGAGATGCTGACAAGAGAATCCGTGTGTTTCCCTGTCCTCTTGCCTGGA
CAACGCATGGCTATTATTTGTTTCAGGATTTAAATAAGTGGAAATTATGT
AAAAAAAAAATCATGCAACCAACTAATGCGATCTCAGGCTTGTCTTATGA
AGTAACTTTTAATCATTACATTTAATTTCACTTGAAACTACCCTTCGTTC
ACATCTTAGCAGCACTTCTCTGGCGTTGACCTTGATGCCTCAGGAGTTCC
GACAGGCATCTTTAGAGAAACAGCTGTCCTTCTCATCACAAACCATATTG
CGGAAAACAATGAAAAGTTGCGCGAAGTTTATATTCGAAATGCGCTGAAC
AATTGTCTCAGGGCAGGGCTAACCGCGGTTCAGACGAATGACATCAAAGC
TTGGAATATCTACCAAAATCTGGAGGCCAAGGGAGAGCTTCCATTGCGAG
TTTTTTTAACGATCAACTATGAAGAGTTTGAAGAAGAAGGAAAGCAACCC
AATTTCCACACCCTCAATAGCAAGCCGCCTCTATTCACCTGTCGGCGTAT
CAAGCTTTATTCGGACGGTTCTTTGGGCGCTGAAACGGCCGCATTGCGTT
CTCCTTATCCAGGTAGCACAAACAGGGGGCTTCTCATCCACAATGTGGAG
GATCTTGCAGCAAAGATCTGCCATTCCCACGAGGCAGGGTTTCAGCTAGA
GGTGCACGCAATAGGGGATCGGGCTTTGTCCACTGTCCTCGAGGCGTTAA
AACGGGCCCGGATTAAGCCTGGTGCCCGGCCTGTGATAACGCATTGCCAG
GTTCTGGGAGAAGATCTTATAAATCGCATGGCCAAACAGGGTGTGGTTGC
CAGTATACAGCCCTCCTTCGTGGGGACAGACTGTCAATGGATTCAGGAGC
GTTTGCCATCCCATGTCCTAAAGACATCTTATTGCTGGAAGAGTTTGTTG
GAAAATGGAGTGTATTGTGCTGGAGGCTCAGACTCACCTGTGGAAGGGTG
CGAGCCGCTAAGCGGCATATACGATGCCATGCACAGGTTGTCTCATGCTA
GCAAATTGACGGCTCGGAAAAAAAAAGACACCACCTCGACCACCAGCGGT
GTCGACGAAAGTTCCTTTTTACCCCGTGAATGTTTGACTTTCACCGAGGC
TCTCCACTTGTATACCATTGGCGGGGCCTACGCCTGTCATATGGAGAAAC
ACCTCGGCCGGATAGCGCCGGGGTATCAGGCAGACTTGGTGGTGGTAGAT
AGGGATGTGACGGGGCCTCGCGGAGAGGACACATGTCATGCGCTCCTTGA
GGCAGCGATCAAAGAGGTATGGGTAGGAGGGATATGCCGCTTTGACAAAA
TGGAGGAAGAGGGCCCTCGAAGGAAGGGAACAGAGCGGGATTTAAAATTA
CGAGAAAACTTGAAAGGGCCTTACATTCCCGGGAAAAACGGTCCAACGGG
ACATCAAAAGCCGGTTGGGTCACTGATCCTGGGCGGCAAAAGACTGGGTA
TAGGTTGTTGTGGGCGGTGAGATAGCGATATGTCGAGATCGCATGCAAGA
GCCCATAGCAGTGTCTTGTTTTAATGTGCTTGTATACTGAAAGTACTCTT
CATCAAAGTTCAATGTCTGTTACCCAAAATTTGACCTTGCTCGCTCTGAC
TTCTCTCCCTTTTACATTATAATGCATTTGATTGCCGTTGTGTGAAAATC
CATTTGAGGAGGACAGTCACTGATAGAGCCAGTTTTGATGCGCCGTTTTC
G back to topCoding sequence (CDS) from alignment at CM002459.1:497666..500116- >rna2485 ID=rna2485|Name=rna2485|organism=Nannochloropsis gaditana|type=CDS|length=3894bp|location=Sequence derived from alignment at CM002459.1:497666..500116- (Nannochloropsis gaditana)
CAGCACTTCTCTGGCGTTGACCTTGATGCCTCAGGAGTTCCGACAGGCAT
CTTTAGAGAAACAGCTGTCCTTCTCATCACAAACCATATTGCGGAAAACA
ATGAAAAGTTGCGCGAAGTTTATATTCGAAATGCGCTGAACAATTGTCTC
AGGGCAGGGCTAACCGCGGTTCAGACGAATGACATCAAAGCTTGGAATAT
CTACCAAAATCTGGAGGCCAAGGGAGAGCTTCCATTGCGAGTTTTTTTAA
CGATCAACTATGAAGAGTTTGAAGAAGAAGGAAAGCAACCCAATTTCCAC
ACCCTCAATAGCAAGCCGCCTCTATTCACCTGTCGGCGTATCAAGCTTTA
TTCGGACGGTTCTTTGGGCGCTGAAACGGCCGCATTGCGTTCTCCTTATC
CAGGTAGCACAAACAGGGGGCTTCTCATCCACAATGTGGAGGATCTTGCA
GCAAAGATCTGCCATTCCCACGAGGCAGGGTTTCAGCTAGAGGTGCACGC
AATAGGGGATCGGGCTTTGTCCACTGTCCTCGAGGCGTTAAAACGGGCCC
GGATTAAGCCTGGTGCCCGGCCTGTGATAACGCATTGCCAGGTTCTGGGA
GAAGATCTTATAAATCGCATGGCCAAACAGGGTGTGGTTGCCAGTATACA
GCCCTCCTTCGTGGGGACAGACTGTCAATGGATTCAGGAGCGTTTGCCAT
CCCATGTCCTAAAGACATCTTATTGCTGGAAGAGTTTGTTGGAAAATGGA
GTGTATTGTGCTGGAGGCTCAGACTCACCTGTGGAAGGGTGCGAGCCGCT
AAGCGGCATATACGATGCCATGCACAGGTTGTCTCATGCTAGCAAATTGA
CGGCTCGGAAAAAAAAAGACACCACCTCGACCACCAGCGGTGTCGACGAA
AGTTCCTTTTTACCCCGTGAATGTTTGACTTTCACCGAGGCTCTCCACTT
GTATACCATTGGCGGGGCCTACGCCTGTCATATGGAGAAACACCTCGGCC
GGATAGCGCCGGGGTATCAGGCAGACTTGGTGGTGGTAGATAGGGATGTG
ACGGGGCCTCGCGGAGAGGACACATGTCATGCGCTCCTTGAGGCAGCGAT
CAAAGAGGTATGGGTAGGAGGGATATGCCGCTTTGACAAAATGGAGGAAG
AGGGCCCTCGAAGGAAGGGAACAGAGCGGGATTTAAAATTACGAGAAAAC
TTGAAAGGGCCTTACATTCCCGGGAAAAACGGTCCAACGGGACATCAAAA
GCCGGTTGGGTCACTGATCCTGGGCGGCAAAAGACTGGGTATAGGTTGTT
GTGGGCGGTGAATGTTGAGGCTATTATACAATGTCAACGCTTCCACTTGT
TTTTTTTTGTCTACATCTGTACATTATCCTCCAGTGAAAACCATGCTGCT
GTTAAAAAATGCCTGCTTTTGGCAATGGGATCCCGACACGCTCCCCTTCT
CGGGCCGCTTAGCGGAAGGCTGGTGCCTGATCGACGATGTGCGGGGAGTC
TTCGACACAGTGTTCTGCGAAGACAACTTATGTATAGATGATCAAAGATC
GGCCTACGAGCAGGCCCAAGCGCAGGCAACGAGAGTTATCGATATGAAAT
GCAACGAGGGCAACATCTTGCTTCCTGGCTTGATTGACTCGCATATACAT
GTGGGATACATGGGGGAGGCCTGCGAGTACTTGCAATTGCGTGGAACTCG
TAGTCTTGATGATCTAAGTACTGCAGTCCGAAACTATGGTAAGGAAAACC
CGAAGAAAAGCTGGATCATCGGTGTCGGATGGGATCAGTCAGGTTGGGGA
GGTTGTTACCCTACCAGGCAAGTCCTCGATGAGGCGATGCGAGAGGACAA
GCGACCGCTCGTATTATACCGAGAATGCTGGCATATCGTTGTTGCTAACA
CAGCCGCCTTACAACGGGCTGGAATCCGGCTCACACCGACGAATGAGCAG
CACTTCTCTGGCGTTGACCTTGATGCCTCAGGAGTTCCGACAGGCATCTT
TAGAGAAACAGCTGTCCTTCTCATCACAAACCATATTGCGGAAAACAATG
AAAAGTTGCGCGAAGTTTATATTCGAAATGCGCTGAACAATTGTCTCAGG
GCAGGGCTAACCGCGGTTCAGACGAATGACATCAAAGCTTGGAATATCTA
CCAAAATCTGGAGGCCAAGGGAGAGCTTCCATTGCGAGTTTTTTTAACGA
TCAACTATGAAGAGTTTGAAGAAGAAGGAAAGCAACCCAATTTCCACACC
CTCAATAGCAAGCCGCCTCTATTCACCTGTCGGCGTATCAAGCTTTATTC
GGACGGTTCTTTGGGCGCTGAAACGGCCGCATTGCGTTCTCCTTATCCAG
GTAGCACAAACAGGGGGCTTCTCATCCACAATGTGGAGGATCTTGCAGCA
AAGATCTGCCATTCCCACGAGGCAGGGTTTCAGCTAGAGGTGCACGCAAT
AGGGGATCGGGCTTTGTCCACTGTCCTCGAGGCGTTAAAACGGGCCCGGA
TTAAGCCTGGTGCCCGGCCTGTGATAACGCATTGCCAGGTTCTGGGAGAA
GATCTTATAAATCGCATGGCCAAACAGGGTGTGGTTGCCAGTATACAGCC
CTCCTTCGTGGGGACAGACTGTCAATGGATTCAGGAGCGTTTGCCATCCC
ATGTCCTAAAGACATCTTATTGCTGGAAGAGTTTGTTGGAAAATGGAGTG
TATTGTGCTGGAGGCTCAGACTCACCTGTGGAAGGGTGCGAGCCGCTAAG
CGGCATATACGATGCCATGCACAGGTTGTCTCATGCTAGCAAATTGACGG
CTCGGAAAAAAAAAGACACCACCTCGACCACCAGCGGTGTCGACGAAAGT
TCCTTTTTACCCCGTGAATGTTTGACTTTCACCGAGGCTCTCCACTTGTA
TACCATTGGCGGGGCCTACGCCTGTCATATGGAGAAACACCTCGGCCGGA
TAGCGCCGGGGTATCAGGCAGACTTGGTGGTGGTAGATAGGGATGTGACG
GGGCCTCGCGGAGAGGACACATGTCATGCGCTCCTTGAGGCAGCGATCAA
AGAGGTATGGGTAGGAGGGATATGCCGCTTTGACAAAATGGAGGAAGAGG
GCCCTCGAAGGAAGGGAACAGAGCGGGATTTAAAATTACGAGAAAACTTG
AAAGGGCCTTACATTCCCGGGAAAAACGGTCCAACGGGACATCAAAAGCC
GGTTGGGTCACTGATCCTGGGCGGCAAAAGACTGGGTATAGGTTGTTGTG
GGCGGTGAATGTTGAGGCTATTATACAATGTCAACGCTTCCACTTGTTTT
TTTTTGTCTACATCTGTACATTATCCTCCAGTGAAAACCATGCTGCTGTT
AAAAAATGCCTGCTTTTGGCAATGGGATCCCGACACGCTCCCCTTCTCGG
GCCGCTTAGCGGAAGGCTGGTGCCTGATCGACGATGTGCGGGGAGTCTTC
GACACAGTGTTCTGCGAAGACAACTTATGTATAGATGATCAAAGATCGGC
CTACGAGCAGGCCCAAGCGCAGGCAACGAGAGTTATCGATATGAAATGCA
ACGAGGGCAACATCTTGCTTCCTGGCTTGATTGACTCGCATATACATGTG
GGATACATGGGGGAGGCCTGCGAGTACTTGCAATTGCGTGGAACTCGTAG
TCTTGATGATCTAAGTACTGCAGTCCGAAACTATGGTAAGGAAAACCCGA
AGAAAAGCTGGATCATCGGTGTCGGATGGGATCAGTCAGGTTGGGGAGGT
TGTTACCCTACCAGGCAAGTCCTCGATGAGGCGATGCGAGAGGACAAGCG
ACCGCTCGTATTATACCGAGAATGCTGGCATATCGTTGTTGCTAACACAG
CCGCCTTACAACGGGCTGGAATCCGGCTCACACCGACGAATGAG back to top
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