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Properties
| Property Name | Value |
|---|
| Product | metal-dependent amidohydrolase 3 |
| Orig transcript id | gnl|cribi|Naga_100004g126.9148.mrna |
| Orig protein id | gnl|cribi|Naga_100004g126.9148 |
| Gbkey | mRNA |
| Note | encoded by transcript variant 2; alternatively spliced |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002459.1 | supercontig | CM002459.1:497666..500116 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2484 ID=rna2484|Name=rna2484|organism=Nannochloropsis gaditana|type=mRNA|length=2325bp
AATGCTTCATGGGTGAAACGGCGAAAGACATGACCAAAAAAAATTCCTCA
GAGATATTTCTACCTCTCCACTTTTTTTTGCCCTGAAGGAATTTGATTAG
CGCAGACAAAGAAGAAGGGCACTGCAAAGTCAGGGGGGAAATTACAGAAC
TAATTCGATCAAGCACGACGCGTCATGGCAGAGCTTAAAAATATGCTTCT
ATCAGATGTGCATCAAACTCGTTTGGCCGTCTTGAACATTGCCACAGCCA
TATTTGCGAGTTTGGTCGGAGGAGAAGCTGAGTCCGACGTTTCGCCCTCC
AAAGAAGAGCCCCATCATGGTGATGATCGGCACTACTTTTATGCTCTTCA
AACCGCCAAATCCACCCCGTCAGAAGGCTCTTCAATAACACTGCCGCAGG
AGAAAGCAAGTTTTGGAGATCAATCTGCGGTATATGTCGCTGAGAGCACT
GAAAAAGGGGTTGGAGCGGTTTTGCCGCCCAGGACTCAAACTATGTCTTC
TGACTTGCCAATGCTGATTGTGTCTGACATGTTGGGCCAGAGACCCCAAA
GTAATGAAGCTGGCAAGAGGGACTTTAGTATGGGGAGGACATCCAAAGAG
GTGTTGGCGCGACGATTGGTGAACAGAAAAGAAGACGAGAGCCCTTTCAA
GAAAATTTCAACTCAGGAAAATTACACTTTGGAGGGATCTTCCAGAATGG
GATCTCGAAAACGGCGCATCAAAACTGGCTCTATCAGTGACTGTCCTCCT
CAAATGGATTTTCACACAACGGCAATCAAATGCATTATAATGTAAAAGGG
AGAGAAGTCAGAGCGAGCAAGGTCAAATTTTGGGTAACAGACATTGAACT
TTGATGAAGAGTACTTTCAGTATACAAGCACATTAAAACAAGACACTGCT
ATGGGCTCTTGCATGCGATCTCGACATATCGCTATCTCACCGCCCACAAC
AACCTATACCCAGTCTTTTGCCGCCCAGGATCAGTGACCCAACCGGCTTT
TGATGTCCCGTTGGACCGTTTTTCCCGGGAATGTAAGGCCCTTTCAAGTT
TTCTCGTAATTTTAAATCCCGCTCTGTTCCCTTCCTTCGAGGGCCCTCTT
CCTCCATTTTGTCAAAGCGGCATATCCCTCCTACCCATACCTCTTTGATC
GCTGCCTCAAGGAGCGCATGACATGTGTCCTCTCCGCGAGGCCCCGTCAC
ATCCCTATCTACCACCACCAAGTCTGCCTGATACCCCGGCGCTATCCGGC
CGAGGTGTTTCTCCATATGACAGGCGTAGGCCCCGCCAATGGTATACAAG
TGGAGAGCCTCGGTGAAAGTCAAACATTCACGGGGTAAAAAGGAACTTTC
GTCGACACCGCTGGTGGTCGAGGTGGTGTCTTTTTTTTTCCGAGCCGTCA
ATTTGCTAGCATGAGACAACCTGTGCATGGCATCGTATATGCCGCTTAGC
GGCTCGCACCCTTCCACAGGTGAGTCTGAGCCTCCAGCACAATACACTCC
ATTTTCCAACAAACTCTTCCAGCAATAAGATGTCTTTAGGACATGGGATG
GCAAACGCTCCTGAATCCATTGACAGTCTGTCCCCACGAAGGAGGGCTGT
ATACTGGCAACCACACCCTGTTTGGCCATGCGATTTATAAGATCTTCTCC
CAGAACCTGGCAATGCGTTATCACAGGCCGGGCACCAGGCTTAATCCGGG
CCCGTTTTAACGCCTCGAGGACAGTGGACAAAGCCCGATCCCCTATTGCG
TGCACCTCTAGCTGAAACCCTGCCTCGTGGGAATGGCAGATCTTTGCTGC
AAGATCCTCCACATTGTGGATGAGAAGCCCCCTGTTTGTGCTACCTGGAT
AAGGAGAACGCAATGCGGCCGTTTCAGCGCCCAAAGAACCGTCCGAATAA
AGCTTGATACGCCGACAGGTGAATAGAGGCGGCTTGCTATTGAGGGTGTG
GAAATTGGGTTGCTTTCCTTCTTCTTCAAACTCTTCATAGTTGATCGTTA
AAAAAACTCGCAATGGAAGCTCTCCCTTGGCCTCCAGATTTTGGTAGATA
TTCCAAGCTTTGATGTCATTCGTCTGAACCGCGGTTAGCCCTGCCCTGAG
ACAATTGTTCAGCGCATTTCGAATATAAACTTCGCGCAACTTTTCATTGT
TTTCCGCAATATGGTTTGTGATGAGAAGGACAGCTGTTTCTCTAAAGATG
CCTGTCGGAACTCCTGAGGCATCAAGGTCAACGCCAGAGAAGTGCTGCTA
AGATGTGAACGAAGGGTAGTTTCAAGTGAAATTAAATGTAATGATTAAAA
GTTACTTCATAAGACAAGCCTGAGA back to topprotein sequence of rna2484 >rna2484-protein ID=rna2484-protein|Name=rna2484|organism=Nannochloropsis gaditana|type=polypeptide|length=647bp
MLRLLYNVNASTCFFLSTSVHYPPVKTMLLLKNACFWQWDPDTLPFSGRL
AEGWCLIDDVRGVFDTVFCEDNLCIDDQRSAYEQAQAQATRVIDMKCNEG
NILLPGLIDSHIHVGYMGEACEYLQLRGTRSLDDLSTAVRNYGKENPKKS
WIIGVGWDQSGWGGCYPTRQVLDEAMREDKRPLVLYRECWHIVVANTAAL
QRAGIRLTPTNEHFSGVDLDASGVPTGIFRETAVLLITNHIAENNEKLRE
VYIRNALNNCLRAGLTAVQTNDIKAWNIYQNLEAKGELPLRVFLTINYEE
FEEEGKQPNFHTLNSKPPLFTCRRIKLYSDGSLGAETAALRSPYPGSTNR
GLLIHNVEDLAAKICHSHEAGFQLEVHAIGDRALSTVLEALKRARIKPGA
RPVITHCQVLGEDLINRMAKQGVVASIQPSFVGTDCQWIQERLPSHVLKT
SYCWKSLLENGVYCAGGSDSPVEGCEPLSGIYDAMHRLSHASKLTARKKK
DTTSTTSGVDESSFLPRECLTFTEALHLYTIGGAYACHMEKHLGRIAPGY
QADLVVVDRDVTGPRGEDTCHALLEAAIKEVWVGGICRFDKMEEEGPRRK
GTERDLKLRENLKGPYIPGKNGPTGHQKPVGSLILGGKRLGIGCCGR back to topmRNA from alignment at CM002459.1:497666..500116- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2484 ID=rna2484|Name=rna2484|organism=Nannochloropsis gaditana|type=mRNA|length=2451bp|location=Sequence derived from alignment at CM002459.1:497666..500116- (Nannochloropsis gaditana)
CCTGACCCCCCCTGGGTACCCTTTGTCTTTACCCCCCGAAACAAAGAATG
TTGAGGCTATTATACAATGTCAACGCTTCCACTTGTTTTTTTTTGTCTAC
ATCTGTACATTATCCTCCAGTGAAAACCATGCTGCTGTTAAAAAATGCCT
GCTTTTGGCAATGGGATCCCGACACGCTCCCCTTCTCGGGCCGCTTAGCG
GAAGGCTGGTGCCTGATCGACGATGTGCGGGGAGTCTTCGACACAGTGTT
CTGCGAAGACAACTTATGTATAGATGATCAAAGATCGGCCTACGAGCAGG
CCCAAGCGCAGGCAACGAGAGTTATCGATATGAAATGCAACGAGGGCAAC
ATCTTGCTTCCTGGCTTGATTGACTCGCATATACATGTGGGATACATGGG
GGAGGCCTGCGAGTACTTGCAATTGCGTGGAACTCGTAGTCTTGATGATC
TAAGTACTGCAGTCCGAAACTATGGTAAGGAAAACCCGAAGAAAAGCTGG
ATCATCGGTGTCGGATGGGATCAGTCAGGTTGGGGAGGTTGTTACCCTAC
CAGGCAAGTCCTCGATGAGGCGATGCGAGAGGACAAGCGACCGCTCGTAT
TATACCGAGAATGCTGGCATATCGTTGTTGCTAACACAGCCGCCTTACAA
CGGGCTGGAATCCGGCTCACACCGACGAATGAGGTAAGCATTTGTAATAC
TTGAGATGCTGACAAGAGAATCCGTGTGTTTCCCTGTCCTCTTGCCTGGA
CAACGCATGGCTATTATTTGTTTCAGGATTTAAATAAGTGGAAATTATGT
AAAAAAAAAATCATGCAACCAACTAATGCGATCTCAGGCTTGTCTTATGA
AGTAACTTTTAATCATTACATTTAATTTCACTTGAAACTACCCTTCGTTC
ACATCTTAGCAGCACTTCTCTGGCGTTGACCTTGATGCCTCAGGAGTTCC
GACAGGCATCTTTAGAGAAACAGCTGTCCTTCTCATCACAAACCATATTG
CGGAAAACAATGAAAAGTTGCGCGAAGTTTATATTCGAAATGCGCTGAAC
AATTGTCTCAGGGCAGGGCTAACCGCGGTTCAGACGAATGACATCAAAGC
TTGGAATATCTACCAAAATCTGGAGGCCAAGGGAGAGCTTCCATTGCGAG
TTTTTTTAACGATCAACTATGAAGAGTTTGAAGAAGAAGGAAAGCAACCC
AATTTCCACACCCTCAATAGCAAGCCGCCTCTATTCACCTGTCGGCGTAT
CAAGCTTTATTCGGACGGTTCTTTGGGCGCTGAAACGGCCGCATTGCGTT
CTCCTTATCCAGGTAGCACAAACAGGGGGCTTCTCATCCACAATGTGGAG
GATCTTGCAGCAAAGATCTGCCATTCCCACGAGGCAGGGTTTCAGCTAGA
GGTGCACGCAATAGGGGATCGGGCTTTGTCCACTGTCCTCGAGGCGTTAA
AACGGGCCCGGATTAAGCCTGGTGCCCGGCCTGTGATAACGCATTGCCAG
GTTCTGGGAGAAGATCTTATAAATCGCATGGCCAAACAGGGTGTGGTTGC
CAGTATACAGCCCTCCTTCGTGGGGACAGACTGTCAATGGATTCAGGAGC
GTTTGCCATCCCATGTCCTAAAGACATCTTATTGCTGGAAGAGTTTGTTG
GAAAATGGAGTGTATTGTGCTGGAGGCTCAGACTCACCTGTGGAAGGGTG
CGAGCCGCTAAGCGGCATATACGATGCCATGCACAGGTTGTCTCATGCTA
GCAAATTGACGGCTCGGAAAAAAAAAGACACCACCTCGACCACCAGCGGT
GTCGACGAAAGTTCCTTTTTACCCCGTGAATGTTTGACTTTCACCGAGGC
TCTCCACTTGTATACCATTGGCGGGGCCTACGCCTGTCATATGGAGAAAC
ACCTCGGCCGGATAGCGCCGGGGTATCAGGCAGACTTGGTGGTGGTAGAT
AGGGATGTGACGGGGCCTCGCGGAGAGGACACATGTCATGCGCTCCTTGA
GGCAGCGATCAAAGAGGTATGGGTAGGAGGGATATGCCGCTTTGACAAAA
TGGAGGAAGAGGGCCCTCGAAGGAAGGGAACAGAGCGGGATTTAAAATTA
CGAGAAAACTTGAAAGGGCCTTACATTCCCGGGAAAAACGGTCCAACGGG
ACATCAAAAGCCGGTTGGGTCACTGATCCTGGGCGGCAAAAGACTGGGTA
TAGGTTGTTGTGGGCGGTGAGATAGCGATATGTCGAGATCGCATGCAAGA
GCCCATAGCAGTGTCTTGTTTTAATGTGCTTGTATACTGAAAGTACTCTT
CATCAAAGTTCAATGTCTGTTACCCAAAATTTGACCTTGCTCGCTCTGAC
TTCTCTCCCTTTTACATTATAATGCATTTGATTGCCGTTGTGTGAAAATC
CATTTGAGGAGGACAGTCACTGATAGAGCCAGTTTTGATGCGCCGTTTTC
G back to topCoding sequence (CDS) from alignment at CM002459.1:497666..500116- >rna2484 ID=rna2484|Name=rna2484|organism=Nannochloropsis gaditana|type=CDS|length=3888bp|location=Sequence derived from alignment at CM002459.1:497666..500116- (Nannochloropsis gaditana)
CACTTCTCTGGCGTTGACCTTGATGCCTCAGGAGTTCCGACAGGCATCTT
TAGAGAAACAGCTGTCCTTCTCATCACAAACCATATTGCGGAAAACAATG
AAAAGTTGCGCGAAGTTTATATTCGAAATGCGCTGAACAATTGTCTCAGG
GCAGGGCTAACCGCGGTTCAGACGAATGACATCAAAGCTTGGAATATCTA
CCAAAATCTGGAGGCCAAGGGAGAGCTTCCATTGCGAGTTTTTTTAACGA
TCAACTATGAAGAGTTTGAAGAAGAAGGAAAGCAACCCAATTTCCACACC
CTCAATAGCAAGCCGCCTCTATTCACCTGTCGGCGTATCAAGCTTTATTC
GGACGGTTCTTTGGGCGCTGAAACGGCCGCATTGCGTTCTCCTTATCCAG
GTAGCACAAACAGGGGGCTTCTCATCCACAATGTGGAGGATCTTGCAGCA
AAGATCTGCCATTCCCACGAGGCAGGGTTTCAGCTAGAGGTGCACGCAAT
AGGGGATCGGGCTTTGTCCACTGTCCTCGAGGCGTTAAAACGGGCCCGGA
TTAAGCCTGGTGCCCGGCCTGTGATAACGCATTGCCAGGTTCTGGGAGAA
GATCTTATAAATCGCATGGCCAAACAGGGTGTGGTTGCCAGTATACAGCC
CTCCTTCGTGGGGACAGACTGTCAATGGATTCAGGAGCGTTTGCCATCCC
ATGTCCTAAAGACATCTTATTGCTGGAAGAGTTTGTTGGAAAATGGAGTG
TATTGTGCTGGAGGCTCAGACTCACCTGTGGAAGGGTGCGAGCCGCTAAG
CGGCATATACGATGCCATGCACAGGTTGTCTCATGCTAGCAAATTGACGG
CTCGGAAAAAAAAAGACACCACCTCGACCACCAGCGGTGTCGACGAAAGT
TCCTTTTTACCCCGTGAATGTTTGACTTTCACCGAGGCTCTCCACTTGTA
TACCATTGGCGGGGCCTACGCCTGTCATATGGAGAAACACCTCGGCCGGA
TAGCGCCGGGGTATCAGGCAGACTTGGTGGTGGTAGATAGGGATGTGACG
GGGCCTCGCGGAGAGGACACATGTCATGCGCTCCTTGAGGCAGCGATCAA
AGAGGTATGGGTAGGAGGGATATGCCGCTTTGACAAAATGGAGGAAGAGG
GCCCTCGAAGGAAGGGAACAGAGCGGGATTTAAAATTACGAGAAAACTTG
AAAGGGCCTTACATTCCCGGGAAAAACGGTCCAACGGGACATCAAAAGCC
GGTTGGGTCACTGATCCTGGGCGGCAAAAGACTGGGTATAGGTTGTTGTG
GGCGGTGAATGTTGAGGCTATTATACAATGTCAACGCTTCCACTTGTTTT
TTTTTGTCTACATCTGTACATTATCCTCCAGTGAAAACCATGCTGCTGTT
AAAAAATGCCTGCTTTTGGCAATGGGATCCCGACACGCTCCCCTTCTCGG
GCCGCTTAGCGGAAGGCTGGTGCCTGATCGACGATGTGCGGGGAGTCTTC
GACACAGTGTTCTGCGAAGACAACTTATGTATAGATGATCAAAGATCGGC
CTACGAGCAGGCCCAAGCGCAGGCAACGAGAGTTATCGATATGAAATGCA
ACGAGGGCAACATCTTGCTTCCTGGCTTGATTGACTCGCATATACATGTG
GGATACATGGGGGAGGCCTGCGAGTACTTGCAATTGCGTGGAACTCGTAG
TCTTGATGATCTAAGTACTGCAGTCCGAAACTATGGTAAGGAAAACCCGA
AGAAAAGCTGGATCATCGGTGTCGGATGGGATCAGTCAGGTTGGGGAGGT
TGTTACCCTACCAGGCAAGTCCTCGATGAGGCGATGCGAGAGGACAAGCG
ACCGCTCGTATTATACCGAGAATGCTGGCATATCGTTGTTGCTAACACAG
CCGCCTTACAACGGGCTGGAATCCGGCTCACACCGACGAATGAGCACTTC
TCTGGCGTTGACCTTGATGCCTCAGGAGTTCCGACAGGCATCTTTAGAGA
AACAGCTGTCCTTCTCATCACAAACCATATTGCGGAAAACAATGAAAAGT
TGCGCGAAGTTTATATTCGAAATGCGCTGAACAATTGTCTCAGGGCAGGG
CTAACCGCGGTTCAGACGAATGACATCAAAGCTTGGAATATCTACCAAAA
TCTGGAGGCCAAGGGAGAGCTTCCATTGCGAGTTTTTTTAACGATCAACT
ATGAAGAGTTTGAAGAAGAAGGAAAGCAACCCAATTTCCACACCCTCAAT
AGCAAGCCGCCTCTATTCACCTGTCGGCGTATCAAGCTTTATTCGGACGG
TTCTTTGGGCGCTGAAACGGCCGCATTGCGTTCTCCTTATCCAGGTAGCA
CAAACAGGGGGCTTCTCATCCACAATGTGGAGGATCTTGCAGCAAAGATC
TGCCATTCCCACGAGGCAGGGTTTCAGCTAGAGGTGCACGCAATAGGGGA
TCGGGCTTTGTCCACTGTCCTCGAGGCGTTAAAACGGGCCCGGATTAAGC
CTGGTGCCCGGCCTGTGATAACGCATTGCCAGGTTCTGGGAGAAGATCTT
ATAAATCGCATGGCCAAACAGGGTGTGGTTGCCAGTATACAGCCCTCCTT
CGTGGGGACAGACTGTCAATGGATTCAGGAGCGTTTGCCATCCCATGTCC
TAAAGACATCTTATTGCTGGAAGAGTTTGTTGGAAAATGGAGTGTATTGT
GCTGGAGGCTCAGACTCACCTGTGGAAGGGTGCGAGCCGCTAAGCGGCAT
ATACGATGCCATGCACAGGTTGTCTCATGCTAGCAAATTGACGGCTCGGA
AAAAAAAAGACACCACCTCGACCACCAGCGGTGTCGACGAAAGTTCCTTT
TTACCCCGTGAATGTTTGACTTTCACCGAGGCTCTCCACTTGTATACCAT
TGGCGGGGCCTACGCCTGTCATATGGAGAAACACCTCGGCCGGATAGCGC
CGGGGTATCAGGCAGACTTGGTGGTGGTAGATAGGGATGTGACGGGGCCT
CGCGGAGAGGACACATGTCATGCGCTCCTTGAGGCAGCGATCAAAGAGGT
ATGGGTAGGAGGGATATGCCGCTTTGACAAAATGGAGGAAGAGGGCCCTC
GAAGGAAGGGAACAGAGCGGGATTTAAAATTACGAGAAAACTTGAAAGGG
CCTTACATTCCCGGGAAAAACGGTCCAACGGGACATCAAAAGCCGGTTGG
GTCACTGATCCTGGGCGGCAAAAGACTGGGTATAGGTTGTTGTGGGCGGT
GAATGTTGAGGCTATTATACAATGTCAACGCTTCCACTTGTTTTTTTTTG
TCTACATCTGTACATTATCCTCCAGTGAAAACCATGCTGCTGTTAAAAAA
TGCCTGCTTTTGGCAATGGGATCCCGACACGCTCCCCTTCTCGGGCCGCT
TAGCGGAAGGCTGGTGCCTGATCGACGATGTGCGGGGAGTCTTCGACACA
GTGTTCTGCGAAGACAACTTATGTATAGATGATCAAAGATCGGCCTACGA
GCAGGCCCAAGCGCAGGCAACGAGAGTTATCGATATGAAATGCAACGAGG
GCAACATCTTGCTTCCTGGCTTGATTGACTCGCATATACATGTGGGATAC
ATGGGGGAGGCCTGCGAGTACTTGCAATTGCGTGGAACTCGTAGTCTTGA
TGATCTAAGTACTGCAGTCCGAAACTATGGTAAGGAAAACCCGAAGAAAA
GCTGGATCATCGGTGTCGGATGGGATCAGTCAGGTTGGGGAGGTTGTTAC
CCTACCAGGCAAGTCCTCGATGAGGCGATGCGAGAGGACAAGCGACCGCT
CGTATTATACCGAGAATGCTGGCATATCGTTGTTGCTAACACAGCCGCCT
TACAACGGGCTGGAATCCGGCTCACACCGACGAATGAG back to top
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