rna2482, rna2482 (mRNA) Nannochloropsis gaditana

Overview
Namerna2482
Unique Namerna2482
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length279
Alignment locationCM002459.1:495871..496271 -

Link to JBrowse

Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100004g124.9113.mrna
Orig protein idgnl|cribi|Naga_100004g124.9113
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:495871..496271 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100004g124gene2375Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna2482rna2482-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM28182.1cds2474Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna2482 ID=rna2482|Name=rna2482|organism=Nannochloropsis gaditana|type=mRNA|length=279bp
ATGTTTCCATTGGGTAACAAGACAGCTATCGACGCAGTGATATCAAAAGA
CGATACAGGACCATCCAATAATTTGGCCTGTCCTCTAGATAATTTTGCCC
GCGATAAGGTCAAAGACATGAAAGACTTGTACGAAAAACAATTGCAGTAT
GATTTCAGTGGCTATGTACAGCACAGGATGGCTCAGAATATGTACGTGTC
TCTAATTTTACCCTTCGTATATATGCAGGAGGGGTCGGTGAAAGGTACCA
CACAGAGACGCTTCAATATCTGTAGGTGA
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protein sequence of rna2482

>rna2482-protein ID=rna2482-protein|Name=rna2482|organism=Nannochloropsis gaditana|type=polypeptide|length=95bp
MSGVGERINEAMEGAKEKISDAGQSIREGVSRASERTAAGTQQATHRMQE
AGQNAVHSGKESGLETGHSAEEAYEQAKHKAQESAPSTRSGSSHK
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mRNA from alignment at CM002459.1:495871..496271-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna2482 ID=rna2482|Name=rna2482|organism=Nannochloropsis gaditana|type=mRNA|length=401bp|location=Sequence derived from alignment at CM002459.1:495871..496271- (Nannochloropsis gaditana)
ATGTCGGGTGTCGGAGAACGCATGTAGGTCGTGGGCGGGTAAATCGGGGT
CAAGGGCGTTCGTTTGATGCGCCTTATCGGCGACAAGAATTTTTTTGAAA
AGATGAATCTTATCTGGTTACGTGACAACGATATAGTAACGAGGCGATGG
AAGGCGCTAAGGAAAAGATAAGCGACGCGGGGCAATCCATCCGTGAGGGT
GTCTCCCGTGCTTCCGAGCGCACTGCAGCAGGGACCCAGCAGGCCACTCA
CCGGATGCAGGAGGCAGGGCAAAATGCTGTGCACTCGGGGAAAGAAAGTG
GGCTCGAAACGGGACACTCGGCTGAAGAGGCCTACGAGCAGGCCAAACAT
AAGGCTCAAGAAAGCGCCCCATCCACCCGTAGTGGTAGCAGCCACAAATG
A
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Coding sequence (CDS) from alignment at CM002459.1:495871..496271-

>rna2482 ID=rna2482|Name=rna2482|organism=Nannochloropsis gaditana|type=CDS|length=576bp|location=Sequence derived from alignment at CM002459.1:495871..496271- (Nannochloropsis gaditana)
TAACGAGGCGATGGAAGGCGCTAAGGAAAAGATAAGCGACGCGGGGCAAT
CCATCCGTGAGGGTGTCTCCCGTGCTTCCGAGCGCACTGCAGCAGGGACC
CAGCAGGCCACTCACCGGATGCAGGAGGCAGGGCAAAATGCTGTGCACTC
GGGGAAAGAAAGTGGGCTCGAAACGGGACACTCGGCTGAAGAGGCCTACG
AGCAGGCCAAACATAAGGCTCAAGAAAGCGCCCCATCCACCCGTAGTGGT
AGCAGCCACAAATGAATGTCGGGTGTCGGAGAACGCATTAACGAGGCGAT
GGAAGGCGCTAAGGAAAAGATAAGCGACGCGGGGCAATCCATCCGTGAGG
GTGTCTCCCGTGCTTCCGAGCGCACTGCAGCAGGGACCCAGCAGGCCACT
CACCGGATGCAGGAGGCAGGGCAAAATGCTGTGCACTCGGGGAAAGAAAG
TGGGCTCGAAACGGGACACTCGGCTGAAGAGGCCTACGAGCAGGCCAAAC
ATAAGGCTCAAGAAAGCGCCCCATCCACCCGTAGTGGTAGCAGCCACAAA
TGAATGTCGGGTGTCGGAGAACGCAT
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Synonyms
Publications