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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100004g118.9225.mrna |
| Orig protein id | gnl|cribi|Naga_100004g118.9225 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002459.1 | supercontig | CM002459.1:483627..485928 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2476 ID=rna2476|Name=rna2476|organism=Nannochloropsis gaditana|type=mRNA|length=1892bp
AGGGGCAAGCGTTGTCGATGGTTCTAGAGCCTTCGTCTGACAACCCTCTG
GATATCATTTCGCACAGCATCCGCAGCCTGCGAGTCCGTCGCGGGAACTA
CCGAGCGACGTCTTCAACAGAGCCCGGGTCTCTTTACCCACCTCAGACAA
GCATGGGAGACGACGCGAACGAAAGCAAAAAAGAAATCTACAATTACGAG
ACGAGCTGGCTCATCTTTGCAATGGCCTGGAACCAGCGCACCGACATGTC
AAATCGTTTCAGGATCGCACTTGGCTCATACATCGAGGAATATAACAATA
AAATTCGCATTATTGAGCGCATCCACTCCTCTACCTCGAGCGCAAACGGA
GACGGAAGTCTTCAGAGGGTAATGGAATTCGACCATCCTTATCCTGCTAC
CAAGATCATGTGGTGCCCCGATAGAGAGCCTGTGAGCCCTCAGCGGGATC
TTCTGGCGACAACAGGCGACTACTTGCGAATATGGAATGTCAATTCAGGA
GAAGCGAAATTGGAGGCGTTGTTGAACAATAATAAAAACAGTGAATTTTG
CGCGCCTCTTACCTCCTTCGATTGGAACAAAGACGACCCTTCCCTACTAG
GTACGGCCTGCATTGACACGACTTGCACGATTTGGGATGTGAACGCGCAG
CAGGCAAAAACTCAGATAATAGCCCACGACAAAGAGGTCTACGATATCGC
TTTCGCTCGCGGTAAGGATCTTTTCGCTTCTGTGGGTGCTGACGGTTCTG
TGCGCATGTTCGATTTGCGCTCTCTTGTTCACTCCACCATTATATACGAG
TCGCCCGACCTGGTGCCTCTGCTCCGTCTCGCGTGGAACCGACAAGATCC
CAACTATTTGGCCACCATCATGGCAGACAGCACCAAGACATATCTACTGG
ACATCCGGAAGCCGTCCTCGACTGTCGCGGAACTCGGCGAGCACCAGGGT
GCTGTAAATTCCTTGTCCTGGGCACCACATTCTGCTTGTCATATTTGCAC
CTGTGGTGAGGATAGACAAGCATTGATCTGGGATTTGTCTGCTCTTCCAG
GTCCTATAGAAAGCCCAATCTTGGCGTATACAGCCCAGGCGGAGATAAAT
AGTTTAGAGTGGTTCCAGCAAAGCCCCGAGAGAAATTGGGTCGGAATTGG
TTTCGATAACCGGTTGCAGGTTTTGAGGGTTTAACGGACTGTGATGGCAT
GTTGTATAGTCGTAGATGAGATTGCACTTGTAGTGTGCTTACTGTGATTG
CTTTGCAGCCGTGTGTGCCCGCACGGTGGGGTTGGAAGGGATGGCATTGC
AGCAAATGGGAAATGTGTATGCTGTCAAAACGCTCATCCACAACCGGATT
TATCGCTGCATGCCGACGCTCGTGGAACAATGTGGTAAGCAGGATTCCGA
ATCCGAAAGGATAGCACGCCGTGTGCAGTGATTTTATTCATGTGAAGCGA
TGTCGACAAAGAACAATGCGGCGCGATCGATTTACTATCTGTGAAAGCAT
GCGCCTCGGTCTGCTTTCTCCAGCATTTTTGTAACGCTTTATTCCCCGTA
GACAAGCTTAACATGTGACCGTATAAATTGTCTGCCACGCGTGACATAAA
TGAGCCGGTTACAAGGTATGAGAGAAGGCAAGCCTTCTTATCAGCCTCTA
TTTGAAGTCACGAAAAACAAAGCTTCCTCAGCTGCCAGTCAATTCTCTTT
TCGGAAACATGTACAGAAACTCGTGAGCTCGCGTCCTTCTTCCTCAGTCT
TAACTGACTTCGAGATATGGCTACCTATCCATGACAAGCCTGGCCTCTCT
TGATGAATCACTTCAATGACTTCATTTTTTTCCTATACAAAGGCTTTGCT
GATTGCTCGATGTATGAAGCAATTGCACCTTCCCATATTCTT back to topprotein sequence of rna2476 >rna2476-protein ID=rna2476-protein|Name=rna2476|organism=Nannochloropsis gaditana|type=polypeptide|length=695bp
MRYSLRAVVDQVLQERGGRPLDLRIPVGGHKLTSGVTKVARNEHRFPYSA
ATPENPDETLPKESSSKSSNLAKSIVKNIECEGDGIRRERKGIGQSKSKR
LLGVKDKRKSEKGGDGSATDAKAPREMKESTVREAEERCYPEVLWIPMDR
QETKRKGRGARRALPGPARGASHQAISNLKRLGVDPPEEEVVSDGYLRRS
QGGEYEDKCGSQRPGRVPKKKEKGSGRLTRAVAAVEQEGECTASRSPTSK
IRLKKYDRREIAGRPSGVERVGRPSQAVSRRAPGQRGRTREGICGEAMSV
KAEANRKRTEFWKEKTTSEKKEQVIVEEEEEKKKKKEEEKEEEKEVEGKV
IELGEELQEKRERQRIRLKFGVDDAEHEEEEEEAVMIGEEEVQGGRGSDD
ALSLDEEPLREGKENDLYEQISYLESQVAAMERLVRREHLRVAEEGEGDE
SDRLRRSERALEARRGPAMGRERGGPATRRCSVYLPSLSSSPSSEDEDER
EEVVGGLGRDAGQWGACSGSLRDLEARLSKMEINVLEIHSQMQGRGGDGA
TCGSQPSYEGKILSSGNEADGVLQEREMPEAALAEATKLWTTRDGCDTIQ
SLLTQLQEIQDECSDSNFLASSNGGAWVDREQLANGLNHHPAGREEVKFA
ASRPSHGSEGTSRDAKNIILREQQLDALEARLAAITSKIRSEIPL back to topmRNA from alignment at CM002459.1:483627..485928- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2476 ID=rna2476|Name=rna2476|organism=Nannochloropsis gaditana|type=mRNA|length=2302bp|location=Sequence derived from alignment at CM002459.1:483627..485928- (Nannochloropsis gaditana)
ACAGATTGATAATGCGGTACAGTTTACGCGCTGTCGTAGACCAGGTTCTG
CAGGAGCGTGGAGGACGACCACTTGATCTTAGAATTCCTGTCGGTGGCCA
CAAGCTTACCTCTGGAGTCACAAAAGTGGCACGGAACGAACACCGTTTTC
CGTACTCGGCCGCTACCCCGGAGAACCCGGATGAGACTTTACCAAAAGAA
TCTTCAAGCAAGTCTTCCAATTTAGCTAAAAGTATTGTAAAGAATATCGA
ATGTGAAGGGGATGGGATTCGAAGAGAGCGGAAAGGAATTGGACAAAGCA
AAAGCAAGCGTCTGTTGGGAGTGAAAGACAAAAGGAAGAGCGAAAAGGGG
GGAGACGGCTCAGCGACTGATGCAAAGGCACCACGGGAGATGAAAGAATC
TACTGTAAGAGAAGCAGAGGAGCGTTGTTACCCTGAAGTATTGTGGATAC
CAATGGATCGACAAGAAACGAAAAGGAAGGGAAGGGGGGCACGTAGAGCA
TTGCCAGGGCCAGCAAGAGGCGCGAGTCATCAAGCGATCTCAAATCTCAA
GCGTTTGGGCGTCGACCCACCAGAAGAAGAAGTTGTAAGCGATGGCTATT
TGCGGCGTAGCCAGGGGGGGGAGTACGAGGACAAGTGTGGCTCACAGAGA
CCAGGGCGCGTACCTAAAAAGAAGGAGAAGGGGAGCGGGAGGCTGACAAG
AGCAGTGGCGGCCGTCGAGCAGGAGGGTGAATGCACGGCTTCGCGTTCTC
CAACGTCAAAAATAAGATTGAAAAAGTATGATAGACGGGAAATAGCGGGG
CGTCCGTCAGGAGTTGAACGGGTAGGACGACCGAGTCAAGCTGTCTCGAG
GAGAGCACCCGGGCAAAGGGGCAGGACCAGGGAAGGGATCTGTGGAGAGG
CGATGTCAGTAAAAGCGGAAGCTAACCGGAAGCGCACAGAATTTTGGAAG
GAAAAAACGACGTCGGAGAAAAAAGAGCAGGTGATTGTGGAGGAGGAGGA
GGAGAAGAAGAAGAAGAAGGAGGAGGAGAAGGAGGAGGAGAAGGAGGTGG
AGGGAAAGGTGATAGAATTAGGGGAAGAATTGCAAGAGAAAAGAGAGAGG
CAAAGAATCAGGTTGAAATTTGGAGTGGATGACGCCGAGCATGAAGAGGA
AGAGGAGGAAGCGGTGATGATAGGCGAGGAGGAAGTTCAGGGAGGTCGCG
GGAGTGACGATGCGTTGTCCCTCGACGAAGAGCCGCTGAGAGAGGGAAAG
GAAAATGACCTGTATGAGCAGATATCTTATTTGGAGTCTCAGGTGGCAGC
CATGGAGCGATTGGTGAGGCGCGAGCACCTGCGTGTCGCGGAGGAAGGCG
AAGGCGACGAGAGCGACAGACTGCGCCGATCTGAGCGAGCCTTGGAGGCC
AGGCGGGGACCCGCGATGGGTAGAGAAAGAGGAGGTCCCGCCACACGACG
GTGTTCCGTCTACTTGCCCTCCCTGTCGTCGTCCCCGTCCTCCGAGGACG
AGGACGAGCGGGAGGAAGTGGTGGGAGGCTTGGGGAGGGACGCGGGGCAG
TGGGGGGCTTGTTCGGGCTCTTTGAGGGACTTAGAGGCCCGTCTATCAAA
GATGGAAATCAACGTTCTAGAGATTCATTCACAAATGCAGGGGCGAGGGG
GTGATGGTGCCACTTGTGGGTCTCAGCCTTCCTATGAAGGCAAGATACTT
TCATCAGGAAACGAAGCGGACGGAGGTAAGGATATGCGGACGAGCATGCC
GAGAGTAGCCAAGAATAGAGGCCTCGAAAAGAGCCCCGTACATTCAAGTA
TCCTGGACATGTGTTATCGACCCACGTTCCATTCCTCAGTTCTTCAAGAA
AGGGAGATGCCGGAAGCGGCACTTGCGGAGGCGACCAAGCTCTGGACTAC
CCGAGATGGCTGTGACACCATACAGTCCTTGCTTACGCAGTTGCAAGAAA
TACAAGACGAATGCTCCGATTCCAACTTTCTGGCGTCCTCGAATGGCGGC
GCATGGGTGGACAGAGAGCAGCTAGCTAATGGCCTCAATCATCACCCGGC
GGGGCGGGAGGAGGTTAAATTTGCTGCCTCCAGACCTTCACACGGCTCTG
AGGGTACAAGTCGTGACGCCAAGAATATCATTTTACGAGAACAGCAATTG
GATGCTCTGGAAGCTCGCCTAGCAGCCATTACCTCCAAAATACGAAGCGA
GATACCACTCTAAAAGCGATGTTCAAGATGCCCGTCATCTCGCCCCCGAA
GTCTCTATGCGGATGGTCAAATGAAAGGAAAAAGCAAAGTTTGTCCTTTT
CA back to topCoding sequence (CDS) from alignment at CM002459.1:483627..485928- >rna2476 ID=rna2476|Name=rna2476|organism=Nannochloropsis gaditana|type=CDS|length=4176bp|location=Sequence derived from alignment at CM002459.1:483627..485928- (Nannochloropsis gaditana)
TTCTTCAAGAAAGGGAGATGCCGGAAGCGGCACTTGCGGAGGCGACCAAG
CTCTGGACTACCCGAGATGGCTGTGACACCATACAGTCCTTGCTTACGCA
GTTGCAAGAAATACAAGACGAATGCTCCGATTCCAACTTTCTGGCGTCCT
CGAATGGCGGCGCATGGGTGGACAGAGAGCAGCTAGCTAATGGCCTCAAT
CATCACCCGGCGGGGCGGGAGGAGGTTAAATTTGCTGCCTCCAGACCTTC
ACACGGCTCTGAGGGTACAAGTCGTGACGCCAAGAATATCATTTTACGAG
AACAGCAATTGGATGCTCTGGAAGCTCGCCTAGCAGCCATTACCTCCAAA
ATACGAAGCGAGATACCACTCTAAATGCGGTACAGTTTACGCGCTGTCGT
AGACCAGGTTCTGCAGGAGCGTGGAGGACGACCACTTGATCTTAGAATTC
CTGTCGGTGGCCACAAGCTTACCTCTGGAGTCACAAAAGTGGCACGGAAC
GAACACCGTTTTCCGTACTCGGCCGCTACCCCGGAGAACCCGGATGAGAC
TTTACCAAAAGAATCTTCAAGCAAGTCTTCCAATTTAGCTAAAAGTATTG
TAAAGAATATCGAATGTGAAGGGGATGGGATTCGAAGAGAGCGGAAAGGA
ATTGGACAAAGCAAAAGCAAGCGTCTGTTGGGAGTGAAAGACAAAAGGAA
GAGCGAAAAGGGGGGAGACGGCTCAGCGACTGATGCAAAGGCACCACGGG
AGATGAAAGAATCTACTGTAAGAGAAGCAGAGGAGCGTTGTTACCCTGAA
GTATTGTGGATACCAATGGATCGACAAGAAACGAAAAGGAAGGGAAGGGG
GGCACGTAGAGCATTGCCAGGGCCAGCAAGAGGCGCGAGTCATCAAGCGA
TCTCAAATCTCAAGCGTTTGGGCGTCGACCCACCAGAAGAAGAAGTTGTA
AGCGATGGCTATTTGCGGCGTAGCCAGGGGGGGGAGTACGAGGACAAGTG
TGGCTCACAGAGACCAGGGCGCGTACCTAAAAAGAAGGAGAAGGGGAGCG
GGAGGCTGACAAGAGCAGTGGCGGCCGTCGAGCAGGAGGGTGAATGCACG
GCTTCGCGTTCTCCAACGTCAAAAATAAGATTGAAAAAGTATGATAGACG
GGAAATAGCGGGGCGTCCGTCAGGAGTTGAACGGGTAGGACGACCGAGTC
AAGCTGTCTCGAGGAGAGCACCCGGGCAAAGGGGCAGGACCAGGGAAGGG
ATCTGTGGAGAGGCGATGTCAGTAAAAGCGGAAGCTAACCGGAAGCGCAC
AGAATTTTGGAAGGAAAAAACGACGTCGGAGAAAAAAGAGCAGGTGATTG
TGGAGGAGGAGGAGGAGAAGAAGAAGAAGAAGGAGGAGGAGAAGGAGGAG
GAGAAGGAGGTGGAGGGAAAGGTGATAGAATTAGGGGAAGAATTGCAAGA
GAAAAGAGAGAGGCAAAGAATCAGGTTGAAATTTGGAGTGGATGACGCCG
AGCATGAAGAGGAAGAGGAGGAAGCGGTGATGATAGGCGAGGAGGAAGTT
CAGGGAGGTCGCGGGAGTGACGATGCGTTGTCCCTCGACGAAGAGCCGCT
GAGAGAGGGAAAGGAAAATGACCTGTATGAGCAGATATCTTATTTGGAGT
CTCAGGTGGCAGCCATGGAGCGATTGGTGAGGCGCGAGCACCTGCGTGTC
GCGGAGGAAGGCGAAGGCGACGAGAGCGACAGACTGCGCCGATCTGAGCG
AGCCTTGGAGGCCAGGCGGGGACCCGCGATGGGTAGAGAAAGAGGAGGTC
CCGCCACACGACGGTGTTCCGTCTACTTGCCCTCCCTGTCGTCGTCCCCG
TCCTCCGAGGACGAGGACGAGCGGGAGGAAGTGGTGGGAGGCTTGGGGAG
GGACGCGGGGCAGTGGGGGGCTTGTTCGGGCTCTTTGAGGGACTTAGAGG
CCCGTCTATCAAAGATGGAAATCAACGTTCTAGAGATTCATTCACAAATG
CAGGGGCGAGGGGGTGATGGTGCCACTTGTGGGTCTCAGCCTTCCTATGA
AGGCAAGATACTTTCATCAGGAAACGAAGCGGACGGAGTTCTTCAAGAAA
GGGAGATGCCGGAAGCGGCACTTGCGGAGGCGACCAAGCTCTGGACTACC
CGAGATGGCTGTGACACCATACAGTCCTTGCTTACGCAGTTGCAAGAAAT
ACAAGACGAATGCTCCGATTCCAACTTTCTGGCGTCCTCGAATGGCGGCG
CATGGGTGGACAGAGAGCAGCTAGCTAATGGCCTCAATCATCACCCGGCG
GGGCGGGAGGAGGTTAAATTTGCTGCCTCCAGACCTTCACACGGCTCTGA
GGGTACAAGTCGTGACGCCAAGAATATCATTTTACGAGAACAGCAATTGG
ATGCTCTGGAAGCTCGCCTAGCAGCCATTACCTCCAAAATACGAAGCGAG
ATACCACTCTAAATGCGGTACAGTTTACGCGCTGTCGTAGACCAGGTTCT
GCAGGAGCGTGGAGGACGACCACTTGATCTTAGAATTCCTGTCGGTGGCC
ACAAGCTTACCTCTGGAGTCACAAAAGTGGCACGGAACGAACACCGTTTT
CCGTACTCGGCCGCTACCCCGGAGAACCCGGATGAGACTTTACCAAAAGA
ATCTTCAAGCAAGTCTTCCAATTTAGCTAAAAGTATTGTAAAGAATATCG
AATGTGAAGGGGATGGGATTCGAAGAGAGCGGAAAGGAATTGGACAAAGC
AAAAGCAAGCGTCTGTTGGGAGTGAAAGACAAAAGGAAGAGCGAAAAGGG
GGGAGACGGCTCAGCGACTGATGCAAAGGCACCACGGGAGATGAAAGAAT
CTACTGTAAGAGAAGCAGAGGAGCGTTGTTACCCTGAAGTATTGTGGATA
CCAATGGATCGACAAGAAACGAAAAGGAAGGGAAGGGGGGCACGTAGAGC
ATTGCCAGGGCCAGCAAGAGGCGCGAGTCATCAAGCGATCTCAAATCTCA
AGCGTTTGGGCGTCGACCCACCAGAAGAAGAAGTTGTAAGCGATGGCTAT
TTGCGGCGTAGCCAGGGGGGGGAGTACGAGGACAAGTGTGGCTCACAGAG
ACCAGGGCGCGTACCTAAAAAGAAGGAGAAGGGGAGCGGGAGGCTGACAA
GAGCAGTGGCGGCCGTCGAGCAGGAGGGTGAATGCACGGCTTCGCGTTCT
CCAACGTCAAAAATAAGATTGAAAAAGTATGATAGACGGGAAATAGCGGG
GCGTCCGTCAGGAGTTGAACGGGTAGGACGACCGAGTCAAGCTGTCTCGA
GGAGAGCACCCGGGCAAAGGGGCAGGACCAGGGAAGGGATCTGTGGAGAG
GCGATGTCAGTAAAAGCGGAAGCTAACCGGAAGCGCACAGAATTTTGGAA
GGAAAAAACGACGTCGGAGAAAAAAGAGCAGGTGATTGTGGAGGAGGAGG
AGGAGAAGAAGAAGAAGAAGGAGGAGGAGAAGGAGGAGGAGAAGGAGGTG
GAGGGAAAGGTGATAGAATTAGGGGAAGAATTGCAAGAGAAAAGAGAGAG
GCAAAGAATCAGGTTGAAATTTGGAGTGGATGACGCCGAGCATGAAGAGG
AAGAGGAGGAAGCGGTGATGATAGGCGAGGAGGAAGTTCAGGGAGGTCGC
GGGAGTGACGATGCGTTGTCCCTCGACGAAGAGCCGCTGAGAGAGGGAAA
GGAAAATGACCTGTATGAGCAGATATCTTATTTGGAGTCTCAGGTGGCAG
CCATGGAGCGATTGGTGAGGCGCGAGCACCTGCGTGTCGCGGAGGAAGGC
GAAGGCGACGAGAGCGACAGACTGCGCCGATCTGAGCGAGCCTTGGAGGC
CAGGCGGGGACCCGCGATGGGTAGAGAAAGAGGAGGTCCCGCCACACGAC
GGTGTTCCGTCTACTTGCCCTCCCTGTCGTCGTCCCCGTCCTCCGAGGAC
GAGGACGAGCGGGAGGAAGTGGTGGGAGGCTTGGGGAGGGACGCGGGGCA
GTGGGGGGCTTGTTCGGGCTCTTTGAGGGACTTAGAGGCCCGTCTATCAA
AGATGGAAATCAACGTTCTAGAGATTCATTCACAAATGCAGGGGCGAGGG
GGTGATGGTGCCACTTGTGGGTCTCAGCCTTCCTATGAAGGCAAGATACT
TTCATCAGGAAACGAAGCGGACGGAG back to top
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