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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100004g112.9173.mrna |
| Orig protein id | gnl|cribi|Naga_100004g112.9173 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002459.1 | supercontig | CM002459.1:468071..469144 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2471 ID=rna2471|Name=rna2471|organism=Nannochloropsis gaditana|type=mRNA|length=1433bp
CCGGCGCCTTGCAATTAGATCCACGCTGCCGCACACGCCGCAGGCTCAAG
CTGGGAGTGAACGCGAGACAGCGACTCGGAGATCCTGACCTTTGGGACTG
AGAGGTGTGCTTCGCCGGCCTTGATTTTTTCCCCCCGTACCTCGTCCTCA
TGCATCTCTCCATTGTCCGACCCCGTCAACCTTCACCTTACCGCAAGGTG
CCACCAGGACCCGCAAAAGTTGGAGGTTGCAGTGAAAATTCCCCAGTCGT
AGCAAAGAATTATGACGAGAACCTTGCTTTACTTTTTCCTTCTTGGAGCC
GTACTCCTTTCTGCGTCGGACGCCTTCGTTGCACCACCCGTCCACAGCAG
CAGGGCATCAAGGGTTCAGCTCGTTCGCCAGCAGGCAGTAGTGGAAGCGT
CCTCCCCCGATGACTTCGATAAGCTGGTAACGGGCGCTGGTGAAAAGCTC
CTGATCGTCGATTACTCCACGACATGGTGCGGACCCTGCAAGATGATGGC
TCCGAAATTTGATGAGATGTCCTCGCGCTTTGATGCAGTTTTCGTGAAGG
TAATTGGTGACTCCACACCTGAAGCGGGACAGCTCCTCAAACGCGAGGGC
GTGCGATCGGTGCCGGCCTTTCACTTCTGGAAGAACGGAAAGCGTGTGGA
CTCCATTTCTGGTGCGGACCCAGAACGGCTCGAGGACGTGATCTCCCAAA
ATATATAAATTCGGCGTGGAAGGGAGCGAACTAGTATAAAGGCCATCGTG
CCGTCAGCTATTGATGTTGTTTTGCCTTGCATAGATTTTGACCAGGAGTC
AGGGAGAAAATCGATATGGATTGCGCGAGCACGTGCGTGTCGAATAATCT
ATAAGAGCAGTCTACCGGATGCATCTTGAGGATGTAGTCTACGACAGATT
AAAGTAGAGACGGCTATCGCACCATTCAATATGAATCATGAATAGAAATG
TGAGCACACAAAGTCTCTCTCAGCAGTCGTCATGATATCTATGGAATATA
GTTTTTTCTTTATCTCCGACCCGATGATCAACGCGATGTCCTGTATATTG
TCTATCTTATTCATCTTCTTCGTAATCGTCAACAGGTGTCGCACTCACAC
AATCATAGTGGGTAGAACTCGAATAGCTCTTTTCACTGAAGAGAGAATGC
CGGATTATACCCGTCTTGAATTTCAGAGCTGGGATCTCCTCCTTCATTTT
CATGTCCGCAATTTTCAACCTTACAACTAGAGGAGTGCAAGTTACATCTT
TAGCGTCAGCAATGGCTTCTGGTGAGGACATGCGACCTAGTGGGTTATCA
CTTAATGCCTCCCTTTCTTTTTGCTGCAGTCGCACGCAACGCTCATTTAG
CTTTCGTAAATCGTTTTTGAGGACTTGTATCCGTCTTGATTGTAATTGAC
ATACGTTTTGCTGATCGATAATTTGATTTTTGA back to topprotein sequence of rna2471 >rna2471-protein ID=rna2471-protein|Name=rna2471|organism=Nannochloropsis gaditana|type=polypeptide|length=329bp
MESIAEKLKILDSRIGTSSMSPPSVDRLSFVVQQPTQRELFLKVGFWLIE
RLDGTQSDFSYAQRRKSVEDLVSDISERKILQQCGEEAMRAFELGRGKAV
CRVLDSLCDLVLAKVGFRWQRPVHTICREIPLKADSKETEAVRRSIKESF
PMLLHLQDPSADDQQNTNSVKECKAERKNSDHTSNRLHDQSESKEQRYKA
RVLQLKNQIIDQQNVCQLQSRRIQVLKNDLRKLNERCVRLQQKEREALSD
NPLGRMSSPEAIADAKDVTCTPLVVRLKIADMKMKEEIPALKFKTGIIRH
SLFSEKSYSSSTHYDCVSATPVDDYEEDE back to topmRNA from alignment at CM002459.1:468071..469144- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna2471 ID=rna2471|Name=rna2471|organism=Nannochloropsis gaditana|type=mRNA|length=1074bp|location=Sequence derived from alignment at CM002459.1:468071..469144- (Nannochloropsis gaditana)
GTAAGAAAATACTTCATTTCATATACTCATATGTATTCAGGGCACATCTT
ATCTCACAATGGAGTCGATAGCCGAAAAACTGAAAATACTTGATTCAAGG
ATTGGTACATCCTCCATGTCTCCTCCTAGCGTGGATCGCCTTTCCTTTGT
TGTACAGCAGCCAACTCAGCGCGAACTATTTCTTAAGGTCGGATTTTGGT
TGATTGAAAGATTAGATGGGACGCAGAGCGATTTTTCGTATGCACAGCGC
CGTAAAAGTGTTGAAGATCTTGTCTCAGATATTTCGGAACGAAAAATCTT
GCAGCAGTGTGGCGAAGAGGCTATGAGAGCCTTTGAGTTGGGCCGCGGAA
AAGCGGTCTGTCGTGTCCTAGATAGCCTTTGCGATCTCGTATTAGCCAAA
GTAGGGTTTCGCTGGCAGAGGCCTGTCCATACAATTTGTAGGGAGATTCC
GCTGAAGGCTGACAGCAAGGAGACAGAAGCCGTCCGGAGATCAATAAAAG
AATCATTTCCAATGCTCTTGCACCTTCAGGATCCCTCAGCTGATGACCAA
CAGAATACTAATAGCGTAAAGGAATGTAAGGCGGAAAGGAAGAATAGCGA
TCACACGTCTAACCGACTTCATGATCAGAGTGAAAGTAAGGAGCAGCGGT
ATAAAGCACGAGTTCTCCAGCTCAAAAATCAAATTATCGATCAGCAAAAC
GTATGTCAATTACAATCAAGACGGATACAAGTCCTCAAAAACGATTTACG
AAAGCTAAATGAGCGTTGCGTGCGACTGCAGCAAAAAGAAAGGGAGGCAT
TAAGTGATAACCCACTAGGTCGCATGTCCTCACCAGAAGCCATTGCTGAC
GCTAAAGATGTAACTTGCACTCCTCTAGTTGTAAGGTTGAAAATTGCGGA
CATGAAAATGAAGGAGGAGATCCCAGCTCTGAAATTCAAGACGGGTATAA
TCCGGCATTCTCTCTTCAGTGAAAAGAGCTATTCGAGTTCTACCCACTAT
GATTGTGTGAGTGCGACACCTGTTGACGATTACGAAGAAGATGAATAAGA
TAGACAATATACAGGACATCGCGT back to topCoding sequence (CDS) from alignment at CM002459.1:468071..469144- >rna2471 ID=rna2471|Name=rna2471|organism=Nannochloropsis gaditana|type=CDS|length=990bp|location=Sequence derived from alignment at CM002459.1:468071..469144- (Nannochloropsis gaditana)
ATGGAGTCGATAGCCGAAAAACTGAAAATACTTGATTCAAGGATTGGTAC
ATCCTCCATGTCTCCTCCTAGCGTGGATCGCCTTTCCTTTGTTGTACAGC
AGCCAACTCAGCGCGAACTATTTCTTAAGGTCGGATTTTGGTTGATTGAA
AGATTAGATGGGACGCAGAGCGATTTTTCGTATGCACAGCGCCGTAAAAG
TGTTGAAGATCTTGTCTCAGATATTTCGGAACGAAAAATCTTGCAGCAGT
GTGGCGAAGAGGCTATGAGAGCCTTTGAGTTGGGCCGCGGAAAAGCGGTC
TGTCGTGTCCTAGATAGCCTTTGCGATCTCGTATTAGCCAAAGTAGGGTT
TCGCTGGCAGAGGCCTGTCCATACAATTTGTAGGGAGATTCCGCTGAAGG
CTGACAGCAAGGAGACAGAAGCCGTCCGGAGATCAATAAAAGAATCATTT
CCAATGCTCTTGCACCTTCAGGATCCCTCAGCTGATGACCAACAGAATAC
TAATAGCGTAAAGGAATGTAAGGCGGAAAGGAAGAATAGCGATCACACGT
CTAACCGACTTCATGATCAGAGTGAAAGTAAGGAGCAGCGGTATAAAGCA
CGAGTTCTCCAGCTCAAAAATCAAATTATCGATCAGCAAAACGTATGTCA
ATTACAATCAAGACGGATACAAGTCCTCAAAAACGATTTACGAAAGCTAA
ATGAGCGTTGCGTGCGACTGCAGCAAAAAGAAAGGGAGGCATTAAGTGAT
AACCCACTAGGTCGCATGTCCTCACCAGAAGCCATTGCTGACGCTAAAGA
TGTAACTTGCACTCCTCTAGTTGTAAGGTTGAAAATTGCGGACATGAAAA
TGAAGGAGGAGATCCCAGCTCTGAAATTCAAGACGGGTATAATCCGGCAT
TCTCTCTTCAGTGAAAAGAGCTATTCGAGTTCTACCCACTATGATTGTGT
GAGTGCGACACCTGTTGACGATTACGAAGAAGATGAATAA back to top
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