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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100210g7.8070.mrna |
| Orig protein id | gnl|cribi|Naga_100210g7.8070 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002455.1 | supercontig | CM002455.1:626956..628595 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna247 ID=rna247|Name=rna247|organism=Nannochloropsis gaditana|type=mRNA|length=1361bp
AGTGACGATGTTCTTTTACACACCACCCCTGCTACTCTTTTAGATGTCTG
TTCGTCTTCGTTATGAAGGTTAACTTGCAGTCAAGTGCTGCTCAAGTTTC
GTTGCGGAAAACAAAAAACAATCCGTAGTATATTACGCATGGCGCCGCCA
CATACGTCAAGGCCCCGTACTTCCTGACACGTGAAAAGGAGTGGTTAAAC
GTTTTATGCACTAAACCATAAGGATCACCTAACGCACCTGCAGGTACATT
GCTATATATTTCATGTCGTGGGGACGAGGCGGTGGCGGTAAAGAAACAGA
ATTTGATTGGAGTGGTGATGGTAACGGCGGAGTGGACGTTCAAGGAGACG
GCTTTCGAGACCCTTTCGATGGAGGTTCCGGCGCGGATTCATCAGGCTGG
AATTCGAATGGCACAGATGATGCAATGGCATGGGGCACGGACAATGAGGG
GGCGACTGATTTCGATGGAATGGGTGATGAACGTGGGCAACAGGCGCAGC
CCCGTCAATCAATCAGGCCGCAGACCCAGCCGTCTCAGGCACCTTGGAAA
GGTCAGAAAGGTCCACAGCAAGGCATGAGTCAGGCTGAGACCCGACGGCG
CCTTGGATATGGAAAATGTGTCGTTGATTTTCTTGTCAATGGAGTGCAAG
CTTGTGCTCTTGGGTCCATAATCGGGGTTTTTTCGGGGTATCATGAGGCG
TATAGTGCAGGAGCAAGGGGCAAAACCCTGGTACTCTACGTCCTGTCTCG
AGCCAAATCATCCGCTTTCTCTTTCGGCGCCTGGATTGGTTCATATTCAG
GAAGCAAGTGCGCGTTCATTACGTTGCGCGATGGCAAGAGAGATGCTCTG
AACGCTTTTTTAGCAGGAGGAGTAGCAGGAGCTTTACCTGCCATCGCCTC
CCGGAACCCCCGAACAATTCTTTTCTCAGCCTTGGGATCTGCAGGTTTTA
TGGGAGCCATGGAGAGCTTAGAGGGTTTGTTTGCGGGGGAAAGTAAAGGA
CAAGAAAGGGGAAGCGCGCAATAGCATATGGTTTCTTTCCAAAGCACATA
AGGTAGGTTCGTACATGTTTTTGGAAGCCGCGGCGATCACAAAAGCGGTG
TTTTACGGCCAAGCGGTCGCTGAGAAGAAAGAAAGGCGTACATATACAAG
AAAAGAAGGATGTTAAATGTTCTGTCGTAGTGCTGCTGATACCTCAGAGG
CACCTGCTCTTTCTGGCCTGAACACGAGCAAAGTTATTCTGATGTCAGCT
TTTTCTTGCAAGCACAACGCCGACATAAATTGGTCTTTCGTTTGAATATC
TCCAACAACACACAAAAGGACCTCTTTACACTCTTATTTGAAGCGAATAA
TATGTGTCAAC back to topprotein sequence of rna247 >rna247-protein ID=rna247-protein|Name=rna247|organism=Nannochloropsis gaditana|type=polypeptide|length=314bp
MFGSRPVAPFLSLVHVLLLLQAHHLAAFTSPYPNSRVCSSRLKGYFSVTT
PRQRPNFASKLSHVHQLGIGRGGWVATATGSAGGTGPSSRERITITVSTT
VPSVYELRQTVYSGTSAVETWCVTKSWSEIDDWQIRTNRKLGFILPPIPP
QEAAAKNYFLMEAYLNQVIQIDGLWANNKDAGDVLSFFDVPSFVREDLAT
PTYSVDVFDVDGTPITGKEKDAKDVKTGALLAGATAGFVLGGPFGAALGA
LAANSASARDDSLGDLTRTAGKGVMAAVKQVKRLNDRYDLTERGKDIFKK
GVDTVKNVVDKLDE back to topmRNA from alignment at CM002455.1:626956..628595+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna247 ID=rna247|Name=rna247|organism=Nannochloropsis gaditana|type=mRNA|length=1640bp|location=Sequence derived from alignment at CM002455.1:626956..628595+ (Nannochloropsis gaditana)
GGGCGTCGCGTGAGTCGTGCCTTCACGTTCTAATTTGTCCGCTGTATGCG
TCCCTAATTATCACATCCTACAGCTAGAGCGACGGTGTCTTCCACTACAG
CCTACCGCGTCCTCGTCAGCCTTGCCCAGCCTTGAGAAATGTTTGGTTCG
CGCCCTgtcgcccccttcctcagcctcgtgcacgtcctccttctccttca
ggCACACCACCTCGCAGCTTTTACTAGCCCTTATCCAAACTCGAGGGTAT
GTTCCTCTCGCCTTAAAGGATATTTTAGTGTCACTACGCCTCGGCAGCGT
CCTAATTTTGCTTCGAAACTGTCACATGTGCACCAGTTGGggatagggag
gggaggttgggtaGCTACGGCAACTGGCAGCGCCGGAGGCACGGGGCCTT
CATCGCGTGAACGCATCACCATCACAGTCTCAACAACTGTTCCATCTGTT
TATGAACTTCGACAAACTGTCTATTCTGGAACATCTGCTGTCGAGACATG
GTGTGTTACAAAAAGCTGGTCAGAAATCGATGACTGGCAAATCCGTACAA
ACCGCAAGCTAGGCTTCATCCTTCCACCTATTCCACCTCAAGAGGCTGCG
GCGAAGAATTATTTTCTTATGGAAGCCTATTTAAATCAGGTTATACAAAT
TGACGGCTTGTGGGCCAATAACAAAGACGCTGGAGATGTCTTATCCTTCT
TCGACGTACCATCCTTTGTAAGGGAGGACTTAGCCACACCTACTTACAGT
GTTGATGTGTTTGATGTTGATGGTACTCCTATcacgggaaaagaaaagga
tgcCAAGGACGTGAAGACAGGAGCGTTACTGGCCGGCGCTACCGCAGGCT
TCGTACTGGGTGGTCCTTTTGGGGCGGCGCTGGGGGCGCTGGCGGCCAAC
TCGGCGTCTGCGCGAGATGACTCTCTGGGGGACTTGACGCGAAcggcagg
gaaaggggtCATGGCTGCCGTCAAGCAGGTAAAGCGCTTGAACGACAGGT
ACGATttgacggagaggggaaaagataTCTTCAAGAAAGGCGTCGACACG
GTGAAAAATGTCGTTGACAAGTTAGATGAGTAGTCAGGTAACGAGCCAGC
ACAAGGGTCCAGATTGTAATGCCCCTTGCACGCAAAAATTAAACATATTG
CTTTGTAGACACAACATTTGTCGCATATTTATAGTCCTTTCAGCACGCCC
CTCATCTTTACTAATTCCGTCCATTCGgattcccctcctcgttgAATTAT
CCCATTAGTATGGCTCACCCTGTTCATGCATGGCGTACGGTGTACACGAC
gcttttctcctctcacTTCATTCGCCCATTGTACTTTTACTCAGCTTCCT
AGTCTTTGCCTTCAAAAAGGTATCGGAGGCAAGGCTCCGGCACAATTGTC
AAGCTGAATGACACAACTGGTGTCCGCACGATTTCGCATTCAAGAAGCGG
TCAGGACGACGCGTCTTAAATAAGAAATGAAGTATTATACCTGCCATTGA
TATAATGTtttgaagggggagaaaaccTCTGTCGTTGGCAGAATCTGGAA
GTAATCCCATCGCGAATCAAATTTATCTATGTGTGTATATGTTCTTTGTG
CTTATTATCCACACGTGCATAGTGCTTTAGCTTGCTTCCA back to topCoding sequence (CDS) from alignment at CM002455.1:626956..628595+ >rna247 ID=rna247|Name=rna247|organism=Nannochloropsis gaditana|type=CDS|length=945bp|location=Sequence derived from alignment at CM002455.1:626956..628595+ (Nannochloropsis gaditana)
ATGTTTGGTTCGCGCCCTgtcgcccccttcctcagcctcgtgcacgtcct
ccttctccttcaggCACACCACCTCGCAGCTTTTACTAGCCCTTATCCAA
ACTCGAGGGTATGTTCCTCTCGCCTTAAAGGATATTTTAGTGTCACTACG
CCTCGGCAGCGTCCTAATTTTGCTTCGAAACTGTCACATGTGCACCAGTT
GGggatagggaggggaggttgggtaGCTACGGCAACTGGCAGCGCCGGAG
GCACGGGGCCTTCATCGCGTGAACGCATCACCATCACAGTCTCAACAACT
GTTCCATCTGTTTATGAACTTCGACAAACTGTCTATTCTGGAACATCTGC
TGTCGAGACATGGTGTGTTACAAAAAGCTGGTCAGAAATCGATGACTGGC
AAATCCGTACAAACCGCAAGCTAGGCTTCATCCTTCCACCTATTCCACCT
CAAGAGGCTGCGGCGAAGAATTATTTTCTTATGGAAGCCTATTTAAATCA
GGTTATACAAATTGACGGCTTGTGGGCCAATAACAAAGACGCTGGAGATG
TCTTATCCTTCTTCGACGTACCATCCTTTGTAAGGGAGGACTTAGCCACA
CCTACTTACAGTGTTGATGTGTTTGATGTTGATGGTACTCCTATcacggg
aaaagaaaaggatgcCAAGGACGTGAAGACAGGAGCGTTACTGGCCGGCG
CTACCGCAGGCTTCGTACTGGGTGGTCCTTTTGGGGCGGCGCTGGGGGCG
CTGGCGGCCAACTCGGCGTCTGCGCGAGATGACTCTCTGGGGGACTTGAC
GCGAAcggcagggaaaggggtCATGGCTGCCGTCAAGCAGGTAAAGCGCT
TGAACGACAGGTACGATttgacggagaggggaaaagataTCTTCAAGAAA
GGCGTCGACACGGTGAAAAATGTCGTTGACAAGTTAGATGAGTAG back to top
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