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Properties
| Property Name | Value |
|---|
| Product | sam-dependent methyltransferase |
| Orig transcript id | gnl|cribi|Naga_100004g108.9182.mrna |
| Orig protein id | gnl|cribi|Naga_100004g108.9182 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002459.1 | supercontig | CM002459.1:457292..459253 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2467 ID=rna2467|Name=rna2467|organism=Nannochloropsis gaditana|type=mRNA|length=2745bp
TCCGAGATTGGACGCGTTTACGGCGCAGTATTACTGATGCACAAACTTGT
CCACATAAACCCTTAGACAAGCCTTGTGCGACATCATCAGCGTCACGGGA
GAAGGAAACGTGACCGCGCGGGGGCAGTGATAAGCAGCGTCCTGCTAAGG
GAACGGAAAGCTCGTGTCGGATCCCGCCGGGGCTCACTAAGTCGCGGACC
TCATGGCTACTCCCGCGACCGCCATCTCTGCACCGCCACCATCATTGCCC
GCTCTCCCACCTCCCTTTCTGCAAACGCTTGTCAAGAATCCGAACGTGTC
GGCTGCATGCGTGGCAGGTGCAAATCGTGTTTTGCAGGATTCCGTCCTGG
CCCGACAAGCCGAGTATTTCTCCGGGCGCGTATCTGAGGGTTTGAGCCTC
CTGCTCCCTCCAGTACTGAAACATGTCGTTTTCGCGAAGGACAAGCGTTT
GGGCCTGGGAGAATTCATTTATCAACCACCACTCTGGTCTCTCGGCGTAC
CGGACTCTTGTGGATACATCGGTTTGGAATACTGCCAAATTGATGTGATC
CCTGTGTTCACAAAGTGGGGAGTCTGCGTCCCTCCCGAGTGCTCTGCGGA
TGATATCAAGACTGCCATCTTCCCACCCATTACTCAGGAACTGGCGGAAC
GGGTCAAAGCACGCTGTGGCCCCATGAACGCAGACAAGGCGCTTTTCCTG
ACCGTCGAGCCGCTCAGTGCGGGAGCATGGGCTGCATTGATCCTCATTGC
GCTGCTCATTATATTTGCATCCGCAGCGACGATACTGGACGTGTACGATG
ACAAATGGAACATGCCCTATCTCCAGAAGGGCAGGATGCGGAGCGTGGTC
GATTCTTTTTCGATGTCCAGGAACTACGAACGTCTGATGGCACCGCCGCG
GGCTGGACCATTCGCATCGTTTGATGCGGTCCGAACCTTGGCGATGGGAA
TGATCCTGCTTGGACACACGTTATACTTCAACCTGACCGTGGTGGGCATC
ACGAATCCCCGCGAGTCCCTCGGGTTCTACGGCCGCGGCTTCCTCGCCAC
CGGCCCCGGGCTCATTGCCAACGGCAGTCTCTTAGGAGTCGACACCTTTC
TGGGTCTGGCGGGATTCTTGGCGTTCTACATTTTCCTAAAAGAGCTGGAG
AAGCGGCTGGACCCGTCCCCGCGGGCCCGCAAGCCTCAGAGCGCGGTATC
CTCACAGCAAGGGCCTCAAGACCGGGCAGGGACGTGCGGCAGGGGCGCAT
GGAAAGTCACTCAGATGGCATTGGTGGCCTACCTCCGTCGCTACCTCCGC
CTCACTCCCGCTTATGCTGTGATCCTTCTCATCTTCACCTTTTTGGCCCC
TCTCATGAGCAGCGCCCCTCCCTCCCCGACGGGCGTGATGCAAGAGTCCC
AGGTCTGCCAGGAGAAGTGGTGGCAGAACCTCCTGTATATTAATAATATC
CTTAGCAACCCCTATACCATGTGCTACCAGGCCTCGTGGTTTCTCGCCGT
CGTCCAACAGCTCTTCCTGTTGGTCCCGTGGCTGAGTGCCTTGGCCTTCC
TGAGGCCCTGGCTCGGCCTGATGGTGGGCGTGGCGCTATGTGTAGGGAGT
TACGTGTACACCTTCCAGCATTCCCAAGCTCAGGGGTGGCGGATCAATAG
TATCGACCGACCGGGGTTTCCACGATTCTTCGCGGACTTCTACGCCGGGA
CCTTCACGCGCATGCCGACCTTCCTGATCGGGGGCATGGCGGCGATACTT
TACTTCAAGTACGGGGATCGCTGTCGGGAGTACTGGCGGCGTAAAAGCTT
GCAAACGCCTGGAACAGTGCGCGTGCAAGTCTGGGCCGCCATTGGGCTGG
CACTGGCGCTCTTAGCTGCCGCCATCTTCGGCCCCTATCGGGAGCTTGCC
TTTGCACCCGGCAAGTGGAGTCAGACCACCAGCAGCTCCTACATCACTTT
GGCCTTCTCAGCATGGGTGATGGGCTTGTGTTTCCTGTGTGGTGTGCTGG
CCATGGGCAGAGGCGGCTTGCTAAAGAGGTTCCTTGAGCTTCCATTCTGG
GCGGTTACCTCGCGGTTAACGTACAGCACATACCTGGTGCATCCGATGGT
TATCTTAAGCGTTATTAGTTCAGACGGCGGCCAACCTTTTCACTTTTCCA
TGCTTCATATTTTTAATGCTTTCCTGGGCTATTCAGTGCTTTCGGGCATC
TCGGCCGTCATATTCTTCTTCCTGGTTGAAGCACCTTTTGGAGAGCTAGA
ACGCCTGCTCTTTTCCAGGTTACCGCCTCCTTCCTCATCTTCTACTTTGA
AGGAGAAGTGCACCACGGAGGGAAAGGAATGTGGGGGAAAGAATGAAGGT
GGAAAGGAAAGAGAAGTGCTTGTCATTCTCTCTGAGGCATCGGAAGCGGT
GGAGCAGAGAGAGGCTAGAGGTAATGGAAACTCAGACGGTACTCAATAAG
TCGGTACTCAATAAGTCGAAGCGGATGTGGACTCCAGTTAATGATCTGAA
AGCCGTTGTATAAAATGTGGGTTTTGAAGACGCCTGTTTATATGACCTTA
AAAAGAAAAAGAAGATGGAAAGTGAGAGAAAAAAAAATTGGATGTTATGT
TCTGTGGGTATCGTCATTCCTAAAGGACTGATACTTGTGTAGCTAGTGGA
CGGGTGGCACAAGAGGGTGGAAATCCTGCCAACAGGTCTGTGTGGCCTGG
ATCTGTTTGCGAAACGCGCGCACCAGAGAAGGAAACGCTCACGGA back to topprotein sequence of rna2467 >rna2467-protein ID=rna2467-protein|Name=rna2467|organism=Nannochloropsis gaditana|type=polypeptide|length=534bp
MPRRSSSVALLVTLVLHSTVLCFAYTAHYPAAPRVATSTRPSSKRRDTLQ
CVVTTPHERLASKLTESLIQEPSKFVRFKLTNYPAPSEDSAYPVIQKLQA
RFVSNANTDNVPTRLQVVYTHPTSTTTKNYDLTEAAHILTKHLSPTGPLK
AARLFTTTEDWVLEAGRRMDKARFYKNKPTFTTLKIAEHDRKKKRRLTLT
PFHEVSGEGQRLVDREKPLSSPSKRKDSFLDVYGILGADGRPKAGMKEKF
RQIEKFVEILASLLERETDESLSVTDFGPSVVKALSVLDAGCGKGYLTFA
AYEYLTSKGWKAQVRGVEMRRDLVDQANAVASQLGYAPGLTFIRGTIADL
TAAAEVEGERYDVVIALHACDTATDDCLYLGVQTGAPVIIASPCCHKEIR
RQMRKGQPGDLTVSLQPIVKHGILLERQAEIVTDSLRVLGLQLAGYQAQI
FEWINDEETSKNLMLTASKRRRPLSAKKVIELRRQLGEMIGMFGVKSQHL
LTLLKIDTAQKLNESAEDMNKDIEGDLDANRRKL back to topmRNA from alignment at CM002459.1:457292..459253- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2467 ID=rna2467|Name=rna2467|organism=Nannochloropsis gaditana|type=mRNA|length=1962bp|location=Sequence derived from alignment at CM002459.1:457292..459253- (Nannochloropsis gaditana)
CACGCGGCTTTTCGCACCTCAGACCCTACCACCCGCACTCCCCTCCCGCC
CTCGTCACGACACAGCCTTTCAGAGGGATGCCCCGTCGATCGAGCAGCGT
TGCTTTGCTTGTCACTTTGGTTCTTCATTCCACGGTCCTATGCTTCGCCT
ACACAGCCCATTACCCTGCCGCTCCCCGCGTCGCAACTTCGACAAGGCCG
TCGTCGAAAAGAAGAGACACATTGCAATGTGTCGTAACCACACCACACGA
AAGGTTGGCTTCCAAGCTGACCGAGAGCCTCATCCAGGAGCCATCAAAAT
TTGTCCGCTTCAAACTCACTAATTACCCAGCTCCCTCCGAGGACAGCGCC
TATCCTGTGATACAAAAGCTGCAGGCACGTTTTGTGTCCAATGCTAACAC
TGACAACGTACCAACTCGACTTCAAGTAGTCTACACTCATCCCACGTCAA
CTACCACCAAGAATTACGATCTCACGGAGGCGGCACACATCCTTACGAAG
CACTTGTCCCCGACGGGGCCTCTCAAGGCAGCGCGACTCTTCACGACCAC
TGAGGACTGGGTTTTGGAGGCTGGGAGACGCATGGATAAAGCACGCTTCT
ACAAGAATAAACCAACTTTTACGACGCTTAAAATTGCGGAGCATGATCGC
AAGAAAAAACGGCGGCTGACATTGACGCCCTTCCATGAGGTCTCGGGCGA
AGGTCAGCGTCTCGTTGACCGAGAAAAGCCGTTGTCGTCACCTTCGAAGA
GAAAAGACAGCTTTCTTGACGTGTATGGCATTCTTGGCGCGGATGGAAGG
CCAAAGGCTGGAATGAAGGAAAAATTCCGGCAGATTGAGAAATTTGTGGA
AATTTTGGCGTCCCTGCTTGAGAGAGAGACAGACGAGTCTTTGAGCGTGA
CTGATTTTGGTCCGTCTGTCGTGAAAGCTTTGTCCGTGCTCGATGCGGGT
TGTGGTAAAGGCTATCTCACGTTCGCCGCCTACGAGTACTTGACGTCCAA
AGGGTGGAAGGCGCAAGTCCGAGGGGTGGAGATGCGGCGAGACCTGGTGG
ACCAGGCCAATGCGGTTGCGTCTCAGCTGGGATATGCCCCTGGACTGACC
TTCATACGGGGTACGATCGCGGATTTAACAGCTGCTGCGGAAGTAGAGGG
AGAGCGGTACGACGTAGTGATTGCGTTGCATGCATGCGACACGGCCACGG
ACGATTGTCTTTACCTGGGGGTGCAGACTGGCGCGCCAGTCATAATAGCC
TCGCCTTGCTGTCATAAGGAGATCCGGCGGCAAATGAGAAAAGGTCAGCC
CGGCGATTTAACAGTCTCGTTGCAACCGATTGTCAAGCATGGCATCTTGC
TAGAGCGGCAGGCAGAAATCGTAACGGACAGGTTGGAGCAGAGGGCACTG
GGCTGGGGGAAGGAGTGCTAGAATAGGGTAGAATTAGTCTGGGTATTCGT
CTAGACTCATCTCTCTTCAATCGTACCGCATCAATATTTTCTGATTTTCT
TATCTCTACACGAACAGTCTTCGCGTACTTGGCTTGCAGCTTGCTGGTTA
TCAGGCCCAAATTTTCGAGTGGATCAATGACGAAGAAACCAGCAAAAATC
TAATGCTTACGGCTTCAAAACGGAGACGGCCTTTAAGCGCGAAGAAAGTA
ATTGAGTTGCGGAGGCAACTTGGGGAAATGATAGGCATGTTTGGTGTAAA
ATCTCAACATTTATTGACTTTGCTAAAGATAGATACGGCACAGAAACTGA
ATGAATCAGCAGAAGACATGAACAAGGATATAGAGGGTGATTTAGACGCC
AATCGAAGAAAACTGTAGGCTGCACTGTGACCAAGGGCGCGATTTGGTTT
CCGATGCCTTACTTCATTGTTAAACCACTTATTTTTACCTTCATCTTCAA
GGTAAATGTGATGTATCATCATTAAGCACAGCTTGATTCGAGTGCCTCAC
AGCATGTGACCG back to topCoding sequence (CDS) from alignment at CM002459.1:457292..459253- >rna2467 ID=rna2467|Name=rna2467|organism=Nannochloropsis gaditana|type=CDS|length=3210bp|location=Sequence derived from alignment at CM002459.1:457292..459253- (Nannochloropsis gaditana)
TCTTCGCGTACTTGGCTTGCAGCTTGCTGGTTATCAGGCCCAAATTTTCG
AGTGGATCAATGACGAAGAAACCAGCAAAAATCTAATGCTTACGGCTTCA
AAACGGAGACGGCCTTTAAGCGCGAAGAAAGTAATTGAGTTGCGGAGGCA
ACTTGGGGAAATGATAGGCATGTTTGGTGTAAAATCTCAACATTTATTGA
CTTTGCTAAAGATAGATACGGCACAGAAACTGAATGAATCAGCAGAAGAC
ATGAACAAGGATATAGAGGGTGATTTAGACGCCAATCGAAGAAAACTGTA
GATGCCCCGTCGATCGAGCAGCGTTGCTTTGCTTGTCACTTTGGTTCTTC
ATTCCACGGTCCTATGCTTCGCCTACACAGCCCATTACCCTGCCGCTCCC
CGCGTCGCAACTTCGACAAGGCCGTCGTCGAAAAGAAGAGACACATTGCA
ATGTGTCGTAACCACACCACACGAAAGGTTGGCTTCCAAGCTGACCGAGA
GCCTCATCCAGGAGCCATCAAAATTTGTCCGCTTCAAACTCACTAATTAC
CCAGCTCCCTCCGAGGACAGCGCCTATCCTGTGATACAAAAGCTGCAGGC
ACGTTTTGTGTCCAATGCTAACACTGACAACGTACCAACTCGACTTCAAG
TAGTCTACACTCATCCCACGTCAACTACCACCAAGAATTACGATCTCACG
GAGGCGGCACACATCCTTACGAAGCACTTGTCCCCGACGGGGCCTCTCAA
GGCAGCGCGACTCTTCACGACCACTGAGGACTGGGTTTTGGAGGCTGGGA
GACGCATGGATAAAGCACGCTTCTACAAGAATAAACCAACTTTTACGACG
CTTAAAATTGCGGAGCATGATCGCAAGAAAAAACGGCGGCTGACATTGAC
GCCCTTCCATGAGGTCTCGGGCGAAGGTCAGCGTCTCGTTGACCGAGAAA
AGCCGTTGTCGTCACCTTCGAAGAGAAAAGACAGCTTTCTTGACGTGTAT
GGCATTCTTGGCGCGGATGGAAGGCCAAAGGCTGGAATGAAGGAAAAATT
CCGGCAGATTGAGAAATTTGTGGAAATTTTGGCGTCCCTGCTTGAGAGAG
AGACAGACGAGTCTTTGAGCGTGACTGATTTTGGTCCGTCTGTCGTGAAA
GCTTTGTCCGTGCTCGATGCGGGTTGTGGTAAAGGCTATCTCACGTTCGC
CGCCTACGAGTACTTGACGTCCAAAGGGTGGAAGGCGCAAGTCCGAGGGG
TGGAGATGCGGCGAGACCTGGTGGACCAGGCCAATGCGGTTGCGTCTCAG
CTGGGATATGCCCCTGGACTGACCTTCATACGGGGTACGATCGCGGATTT
AACAGCTGCTGCGGAAGTAGAGGGAGAGCGGTACGACGTAGTGATTGCGT
TGCATGCATGCGACACGGCCACGGACGATTGTCTTTACCTGGGGGTGCAG
ACTGGCGCGCCAGTCATAATAGCCTCGCCTTGCTGTCATAAGGAGATCCG
GCGGCAAATGAGAAAAGGTCAGCCCGGCGATTTAACAGTCTCGTTGCAAC
CGATTGTCAAGCATGGCATCTTGCTAGAGCGGCAGGCAGAAATCGTAACG
GACAGTCTTCGCGTACTTGGCTTGCAGCTTGCTGGTTATCAGGCCCAAAT
TTTCGAGTGGATCAATGACGAAGAAACCAGCAAAAATCTAATGCTTACGG
CTTCAAAACGGAGACGGCCTTTAAGCGCGAAGAAAGTAATTGAGTTGCGG
AGGCAACTTGGGGAAATGATAGGCATGTTTGGTGTAAAATCTCAACATTT
ATTGACTTTGCTAAAGATAGATACGGCACAGAAACTGAATGAATCAGCAG
AAGACATGAACAAGGATATAGAGGGTGATTTAGACGCCAATCGAAGAAAA
CTGTAGATGCCCCGTCGATCGAGCAGCGTTGCTTTGCTTGTCACTTTGGT
TCTTCATTCCACGGTCCTATGCTTCGCCTACACAGCCCATTACCCTGCCG
CTCCCCGCGTCGCAACTTCGACAAGGCCGTCGTCGAAAAGAAGAGACACA
TTGCAATGTGTCGTAACCACACCACACGAAAGGTTGGCTTCCAAGCTGAC
CGAGAGCCTCATCCAGGAGCCATCAAAATTTGTCCGCTTCAAACTCACTA
ATTACCCAGCTCCCTCCGAGGACAGCGCCTATCCTGTGATACAAAAGCTG
CAGGCACGTTTTGTGTCCAATGCTAACACTGACAACGTACCAACTCGACT
TCAAGTAGTCTACACTCATCCCACGTCAACTACCACCAAGAATTACGATC
TCACGGAGGCGGCACACATCCTTACGAAGCACTTGTCCCCGACGGGGCCT
CTCAAGGCAGCGCGACTCTTCACGACCACTGAGGACTGGGTTTTGGAGGC
TGGGAGACGCATGGATAAAGCACGCTTCTACAAGAATAAACCAACTTTTA
CGACGCTTAAAATTGCGGAGCATGATCGCAAGAAAAAACGGCGGCTGACA
TTGACGCCCTTCCATGAGGTCTCGGGCGAAGGTCAGCGTCTCGTTGACCG
AGAAAAGCCGTTGTCGTCACCTTCGAAGAGAAAAGACAGCTTTCTTGACG
TGTATGGCATTCTTGGCGCGGATGGAAGGCCAAAGGCTGGAATGAAGGAA
AAATTCCGGCAGATTGAGAAATTTGTGGAAATTTTGGCGTCCCTGCTTGA
GAGAGAGACAGACGAGTCTTTGAGCGTGACTGATTTTGGTCCGTCTGTCG
TGAAAGCTTTGTCCGTGCTCGATGCGGGTTGTGGTAAAGGCTATCTCACG
TTCGCCGCCTACGAGTACTTGACGTCCAAAGGGTGGAAGGCGCAAGTCCG
AGGGGTGGAGATGCGGCGAGACCTGGTGGACCAGGCCAATGCGGTTGCGT
CTCAGCTGGGATATGCCCCTGGACTGACCTTCATACGGGGTACGATCGCG
GATTTAACAGCTGCTGCGGAAGTAGAGGGAGAGCGGTACGACGTAGTGAT
TGCGTTGCATGCATGCGACACGGCCACGGACGATTGTCTTTACCTGGGGG
TGCAGACTGGCGCGCCAGTCATAATAGCCTCGCCTTGCTGTCATAAGGAG
ATCCGGCGGCAAATGAGAAAAGGTCAGCCCGGCGATTTAACAGTCTCGTT
GCAACCGATTGTCAAGCATGGCATCTTGCTAGAGCGGCAGGCAGAAATCG
TAACGGACAG back to top
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