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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100004g105.9163.mrna |
| Orig protein id | gnl|cribi|Naga_100004g105.9163 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002459.1 | supercontig | CM002459.1:448483..451979 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2465 ID=rna2465|Name=rna2465|organism=Nannochloropsis gaditana|type=mRNA|length=1065bp
ATGCGTGACGCTACAGCATCATCACAGGAGCAGCTCAGGGCGTGCCTCAA
TCTCATGCGGCGACTGCCTCCCTATAAGCAACAGAAAAATCTCCAGGAGC
TGCAGCTATTAGTTCCGTCTATTGTAGGGGAGGAGCTTTTGCAGCGAGTC
GACGTACCTCTGGAAGAAGGAATTGATATGAAAACGAATCAGCCCTATTT
GCTATGCGCCTTCAACCGGGAAGGTTCCTCACACCGGTCGCCCTGGTCCA
ACCTGTATTTCCCCCCCGCGCCCTCGCCGTCCTCCCTCTTCTATCCCTCC
CACTACTTGCGAAGTTTGGAAGTCAAAGCCAACGCCGCATTCCAGATCTA
TCGGGAGCTCTACTATGATGGGCAAGGGGTCTCATCGGTATATTTGTGGG
AATTGAGCGATGAAGACGCGGACATTTCAGAGACGGCCGGTGCGGCCACC
ACGTCGGGCTCCACAGCCTCTCCACGTGTGGGATTCGCCGGATGTTTTGC
AATCAAAAAAGGAGTTCTAGGTGACCGGTCGCGTCGACACGGTACATGGG
ATGCAACGCATGTCGTTGAGGTCCAGCCCTTGTGTTCGGCGGTCGGCAGA
GCAGATATTTTGGCGCATTACAAATTGACGTCGACAATACAGGTGTCGTT
GTTTGCCAGTAGTGATGAATCAGAAGATGTATGTGCGGCATGTGTAATTA
CTAAATTTGTAGAAGCTACTCATCCGGTCGTAGAAAGTACAGGGGGACAC
ATATCTAACGTCGGGCGAATGATTGAAGATCTAGAGATTAAATTGAGGGG
TGATTTGGGCGCGCTTTACCTGCAGAGAACGTGTGATATAGTTGAAAAGG
TGCGAAGATCTTCAGCAACTACGAAAAGCAAAGGTGGGGGAGTATATGGG
GAAAACTCTGCCGAGGGCACAAGGGCTCGCCAACGTCCTGCAGAGGTCCT
TAGTGTCGGTCAAGCTTCTTTTTCATCCGAGCACCAAAAGTCTTTGTTTG
CTGCCATTGCCAGACGGAATGCAGAGCGAGAAAGCAATCATAAGGACTAT
ATCTACGAGGCGTAA back to topprotein sequence of rna2465 >rna2465-protein ID=rna2465-protein|Name=rna2465|organism=Nannochloropsis gaditana|type=polypeptide|length=1062bp
MPSGPGHPLPEGEQDDEQAAFSIGRGRDFFLFTVDITGWGGDGAGLQVLP
DATEEGVWLSYILFKSVACTDRVYSLDKDVKNGSGRRSTDIFRLRSEGNG
ADLAAWFSGTSVWQEQLEDGNGGSGKEVDAGSNRWLQLFLCAPQRFLAMV
RLDLWELLLEGRRPEEMTADFFPHESSGRFQMEGWGEEGPSGQGCGVWVD
VRMRLERDGGEGLSREVFEEGCGLPSLSSGSSPQRQALSVYTIAGAGQGK
KSTTGSHPQGWPEEGGQEKGGEDEGGQDAEEEEEEEEEDVKERISMASAG
DRHEHESSWTRDRPVGRRRFRLSLDLRAIRDLSEARLLYLAYHYPFLNSI
DPEGSDGSDKKALDQAVASDPVLVPAGSEMAMDRSCWTYELPGRYDALED
MAARHPLIVSVMERQAGRKGADIEVGQVQLPLRALLKQAVTYRSAVHPRV
FKTYAACRRFVERRSPLKAAPPPIAMRVIDTYLPVSGGDLRASLRAVLVL
EDLGPAGEPPAQDASTHYRQRPRGTSLSATSPAPQPYQSDQESRPSATLP
APSTDTPVPPAASPSSAQPDLSAALSLLEVRREKLEFEDWRHRTEVEWSE
RLRAREAERLALLDQLHEKRESEQKAILKRGQAALARLERELRRRLGDVE
GTERQQAAKEEEMKARAAQQVEECQSLQRRLRAEAKYQKEVEALRRRELE
GQLDRLKEARQEAETRTKEVQEEYARFRRETRKNVPAALQAEVAALKGEK
AELAARWERERAEKMQALLEKEQYRTALQRTARAWRRDTRKFEMALRRQA
GDVRLEYLSREGQYRVDGRMEELLDIKRTLDAVRQSSKPPAVAMYNKKPP
EAQQQPPQDALGVGSEGTGGGPLEARGRRVRPAPVKAVSRPPPSPASSSP
GDKENLGASSTRWDLISSSSESKSGRSFLEIEGLADLEGAARGRGVNPPL
SRARMEHNKLMRMMMSEDEEGETSLPRPHAEVTPAQSRLLLEETHRLRSE
RDLLLSTGNYGPEDPIIQTLTRLIQERESASAARAAEAANESQASTITFE
APSREAQSRQAV back to topmRNA from alignment at CM002459.1:448483..451979+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2465 ID=rna2465|Name=rna2465|organism=Nannochloropsis gaditana|type=mRNA|length=3497bp|location=Sequence derived from alignment at CM002459.1:448483..451979+ (Nannochloropsis gaditana)
AAACCGGAAGCACAGGCGAAAAGTCAAGCTTGTCCGATATTTTCTATCAT
TTCTCAGAGGAATCTAGCGAAGACACGTCACGAGCAAACTTCCCACATCG
TGAATAAACTTCACACAATTCATACATAGGACCATGCCCTCGGGGCCTGG
ACACCCGCTGccggaaggagagcaggatGACGAGCAAGCAGCATTTTCCA
TCGGCCGGGGGCGggacttctttctcttcacaGTGGACATcacggggtgg
ggaggggatggagccGGCTTGCAGGTGTTGCCCGACGcaacggaggaggg
cgtTTGGCTTTCGTACATATTATTCAAATCTGTGGCTTGCACGGACCGCG
TATACTCACTCGACAAAGACGTCAAGAATGGAAGTGGGAGACGAAGCACG
GACATTTTTCGTCTGCGCAGTGAGGGAAACGGTGCCGACTTGGCAGCCTG
GTTCTCCGGGACGAGCGTTTGGCAGGAACAGTTGGAGGACGGCAATGGTG
GCTCTGGAAAAGAAGTTGACGCTGGAAGTAATCGCTGGCTTCAACTCTTC
CTGTGCGCACCCCAGCGCTTCCTGGCAATGGTGCGCTTGGACTTGTGGGA
GCTCCTCCTGGAGGGCCGCCGGCCAGAGGAGATGACAGCCGATTTCTTCC
CGCACGAATCTTCGGGACGCTTCCAaatggaggggtggggagaggagggg
ccaTCCGGTCAGGGGTGTGGGGTATGGGTAGACGTGCGGATGCGCCTGGA
ACGagacgggggcgagggctTGAGTAGGGAGGTTTTCGAGGAGGGCTGCG
GGCTACCGTCTCTCTCCTCAGGCAGCTCTCCGCAGCGTCAGGCTCTATCG
GTCTACACGATAGCGGGAGCAGGccaagggaagaagagtaCAACAGGGAG
CCATCCTCAGGGTtggccggaggagggaggacaggagaagggaggtgagg
acgaaggagggcaagacgcggaggaggaggaggaggaggaggaggaggat
gtgaaAGAGAGAATCTCCATGGCCTCTGCAGGCGATCGACACGAGCACGA
ATCGTCATGGACTCGCGATAGACCAGTAGGACGGAGGCGGTTCCGGTTGT
CTTTGGACTTGCGGGCCATTCGGGATCTTTCCGAGGCTCGTCTCCTGTAC
CTGGCCTACCATTATCCCTTCCTCAATTCCATCGACCCCGAAGGTAGCGA
TGGGAGCGACAAAAAAGCGCTGGATCAGGCTGTCGCTTCGGATCCTGTGC
TGGTACCTGCGGGCTCGGAGATGGCCATGGATAGGAGCTGTTGGACGTAC
GAGCTCCCTGGCCGGTATGACGCGCTTGAGGACATGGCGGCTCGGCACCC
ATTGATAGTCTCGGTAATggagaggcaggcggggcgaAAGGGGGCAGATA
TCGAGGTCGGACAGGTCCAGCTTCCTCTCAGGGCCCTGCTGAAACAGGCC
GTGACCTACCGGAGTGCAGTCCACCCGCGGGTGTTCAAGACCTATGCTGC
CTGCAGGCGCTTCGTGGAGCGCCGCTCGCCCTTGAAggccgcccctccgc
ccatcgCCATGCGTGTCATTGACACATACCTGCCGGTGAGCGGAGGCGAC
CTGAGGGCCTCTTTACGAGCGGTGCTGGTTCTTGAGGATCTGGGACCGGC
AGGCGAGCCCCCGGCCCAGGACGCGAGCACTCATTACCGGCAGCGACCCC
GGGGAACGTCGCTGTCTGCGACGTCGCCGGCGCCACAGCCGTATCAGAGC
GACCAAGAGAGCCGTCCCTCAGCAACCCTGCCTGCGCCATCAACAGATAC
GCCGGTCCCGCCAgcggcttctccctcttccgcccaACCCGACCTGTCCG
CAGCCCTCTCCCTACTGGAGGTGAGGCGAGAAAAGCTTGAGTTCGAGGAC
TGGCGGCATCGCACCGAGGTGGAGTGGTCGGAGCGGCTGCGGGCTAGGGA
AGCGGAGAGACTGGCGCTCCTAGACCAGCTCCacgagaagagagaaagcg
AGCAGAAAGCGATTTTGAAGCGAGGACAAGCCGCCTTGGCCCGCTTAGAG
AGGGAGTTGCGACGCAGACTGggggatgtggaggggacggagcggcagca
ggcggcgaaggaggaggagatgaaagcgagggcggcgcagcaggtggagg
agtgtCAAAGTCTCCAGCGACGGCTACGAGCCGAGGCCAAATATcagaag
gaagtggaggcatTACGGAGGCGAGAGCTTGAGGGGCAACTCGATCGACT
CAAGGAGGCGAgacaggaggcagagaccaggacgaaggaggtgcaggagg
agTATGCGCGCTTCCGACGCGAGACCCGAAAAAACGTCCCAGCGGCGCtg
caggcggaggtggcagcgctgaaaggggagaaagcggagcTTGCGGCGCg
gtgggagcgggagagggcggagaagaTGCAGGCGctgctggagaaggagc
agtaCCGGACAGCCCTGCAGCGGACGGCACGGGCATGGAGGCGGGACACG
CGGAAATTCGAGATGGCACTCCGGCGACAGGCCGGAGACGTGCGCCTGGA
GTATCTGTCGCGAGAGGGGCAGTACCGTGTGGACGGGCGCATGGAGGAGC
TCCTCGACATCAAGCGGACCCTCGACGCAGTGCGGCAGTCGTCGAAGCCC
CCCGCAGTGGCCATGTACAACAAGAAGCCGCCTGAGGctcagcagcagcc
gccacAAGACGCGCTGGGGGTGGGATCGGAGGGGACTGGTGGAGGCCCCT
TGGAAGCTCGCGGAAGGAGAGTCAGGCCCGCTCCCGTAAAGGCTGTGTCa
cgaccccctccctctcctgcctcctcctcgccgggcgacaaggagaacct
gggcgcctcctccactcggTGGGACCtgatttcttcctcctcagagTCCA
AATCGGGGCGCTCTTTCTTGGAGATAGAAGGGCTGGCAGACTTGGAGGGG
GccgccagggggaggggcgtgaATCCCCCTCTGAGTCGCGCTCGCATGGA
GCACAACAAGCTGATGCGGATGATGAtgagcgaggacgaggagggagaga
ccaGTTTGCCCAGACCGCACGCGGAGGTCACGCCCGCTCAGAGTCGGCTC
CTGCTCGAAGAGACGCACCGGCTTCGCTCCGAGCGGGACTTGTTGTTGTC
CACCGGGAACTACGGGCCCGAGGACCCCATCATACAGACACTTACACGCC
TGATCCAGGAGCGTGAGAGTGCCAGCGCTGCAAGGGCTGCCGAAGCAGCC
AACGAGTCACAGGCGTCAACAATCACCTTCGAAGCTCCTTCGCGAGAAGC
GCAGTCGCGACAGGCTGTGTAGCCCCGTTATGATGGGGCCTTGGAAAGCA
ATCAAACAGTTCATATTATCACCACCACATTCAAAGTTTTTTCAAAAACA
TGCATATAACAAAGACAAGTAAAATAAGATCCGAGATACGCCGGGCCTCA
ACATACGTTCTATGACAACGGGGTTTTTTCCATCCACATTCATTTCC back to topCoding sequence (CDS) from alignment at CM002459.1:448483..451979+ >rna2465 ID=rna2465|Name=rna2465|organism=Nannochloropsis gaditana|type=CDS|length=3189bp|location=Sequence derived from alignment at CM002459.1:448483..451979+ (Nannochloropsis gaditana)
ATGCCCTCGGGGCCTGGACACCCGCTGccggaaggagagcaggatGACGA
GCAAGCAGCATTTTCCATCGGCCGGGGGCGggacttctttctcttcacaG
TGGACATcacggggtggggaggggatggagccGGCTTGCAGGTGTTGCCC
GACGcaacggaggagggcgtTTGGCTTTCGTACATATTATTCAAATCTGT
GGCTTGCACGGACCGCGTATACTCACTCGACAAAGACGTCAAGAATGGAA
GTGGGAGACGAAGCACGGACATTTTTCGTCTGCGCAGTGAGGGAAACGGT
GCCGACTTGGCAGCCTGGTTCTCCGGGACGAGCGTTTGGCAGGAACAGTT
GGAGGACGGCAATGGTGGCTCTGGAAAAGAAGTTGACGCTGGAAGTAATC
GCTGGCTTCAACTCTTCCTGTGCGCACCCCAGCGCTTCCTGGCAATGGTG
CGCTTGGACTTGTGGGAGCTCCTCCTGGAGGGCCGCCGGCCAGAGGAGAT
GACAGCCGATTTCTTCCCGCACGAATCTTCGGGACGCTTCCAaatggagg
ggtggggagaggaggggccaTCCGGTCAGGGGTGTGGGGTATGGGTAGAC
GTGCGGATGCGCCTGGAACGagacgggggcgagggctTGAGTAGGGAGGT
TTTCGAGGAGGGCTGCGGGCTACCGTCTCTCTCCTCAGGCAGCTCTCCGC
AGCGTCAGGCTCTATCGGTCTACACGATAGCGGGAGCAGGccaagggaag
aagagtaCAACAGGGAGCCATCCTCAGGGTtggccggaggagggaggaca
ggagaagggaggtgaggacgaaggagggcaagacgcggaggaggaggagg
aggaggaggaggaggatgtgaaAGAGAGAATCTCCATGGCCTCTGCAGGC
GATCGACACGAGCACGAATCGTCATGGACTCGCGATAGACCAGTAGGACG
GAGGCGGTTCCGGTTGTCTTTGGACTTGCGGGCCATTCGGGATCTTTCCG
AGGCTCGTCTCCTGTACCTGGCCTACCATTATCCCTTCCTCAATTCCATC
GACCCCGAAGGTAGCGATGGGAGCGACAAAAAAGCGCTGGATCAGGCTGT
CGCTTCGGATCCTGTGCTGGTACCTGCGGGCTCGGAGATGGCCATGGATA
GGAGCTGTTGGACGTACGAGCTCCCTGGCCGGTATGACGCGCTTGAGGAC
ATGGCGGCTCGGCACCCATTGATAGTCTCGGTAATggagaggcaggcggg
gcgaAAGGGGGCAGATATCGAGGTCGGACAGGTCCAGCTTCCTCTCAGGG
CCCTGCTGAAACAGGCCGTGACCTACCGGAGTGCAGTCCACCCGCGGGTG
TTCAAGACCTATGCTGCCTGCAGGCGCTTCGTGGAGCGCCGCTCGCCCTT
GAAggccgcccctccgcccatcgCCATGCGTGTCATTGACACATACCTGC
CGGTGAGCGGAGGCGACCTGAGGGCCTCTTTACGAGCGGTGCTGGTTCTT
GAGGATCTGGGACCGGCAGGCGAGCCCCCGGCCCAGGACGCGAGCACTCA
TTACCGGCAGCGACCCCGGGGAACGTCGCTGTCTGCGACGTCGCCGGCGC
CACAGCCGTATCAGAGCGACCAAGAGAGCCGTCCCTCAGCAACCCTGCCT
GCGCCATCAACAGATACGCCGGTCCCGCCAgcggcttctccctcttccgc
ccaACCCGACCTGTCCGCAGCCCTCTCCCTACTGGAGGTGAGGCGAGAAA
AGCTTGAGTTCGAGGACTGGCGGCATCGCACCGAGGTGGAGTGGTCGGAG
CGGCTGCGGGCTAGGGAAGCGGAGAGACTGGCGCTCCTAGACCAGCTCCa
cgagaagagagaaagcgAGCAGAAAGCGATTTTGAAGCGAGGACAAGCCG
CCTTGGCCCGCTTAGAGAGGGAGTTGCGACGCAGACTGggggatgtggag
gggacggagcggcagcaggcggcgaaggaggaggagatgaaagcgagggc
ggcgcagcaggtggaggagtgtCAAAGTCTCCAGCGACGGCTACGAGCCG
AGGCCAAATATcagaaggaagtggaggcatTACGGAGGCGAGAGCTTGAG
GGGCAACTCGATCGACTCAAGGAGGCGAgacaggaggcagagaccaggac
gaaggaggtgcaggaggagTATGCGCGCTTCCGACGCGAGACCCGAAAAA
ACGTCCCAGCGGCGCtgcaggcggaggtggcagcgctgaaaggggagaaa
gcggagcTTGCGGCGCggtgggagcgggagagggcggagaagaTGCAGGC
GctgctggagaaggagcagtaCCGGACAGCCCTGCAGCGGACGGCACGGG
CATGGAGGCGGGACACGCGGAAATTCGAGATGGCACTCCGGCGACAGGCC
GGAGACGTGCGCCTGGAGTATCTGTCGCGAGAGGGGCAGTACCGTGTGGA
CGGGCGCATGGAGGAGCTCCTCGACATCAAGCGGACCCTCGACGCAGTGC
GGCAGTCGTCGAAGCCCCCCGCAGTGGCCATGTACAACAAGAAGCCGCCT
GAGGctcagcagcagccgccacAAGACGCGCTGGGGGTGGGATCGGAGGG
GACTGGTGGAGGCCCCTTGGAAGCTCGCGGAAGGAGAGTCAGGCCCGCTC
CCGTAAAGGCTGTGTCacgaccccctccctctcctgcctcctcctcgccg
ggcgacaaggagaacctgggcgcctcctccactcggTGGGACCtgatttc
ttcctcctcagagTCCAAATCGGGGCGCTCTTTCTTGGAGATAGAAGGGC
TGGCAGACTTGGAGGGGGccgccagggggaggggcgtgaATCCCCCTCTG
AGTCGCGCTCGCATGGAGCACAACAAGCTGATGCGGATGATGAtgagcga
ggacgaggagggagagaccaGTTTGCCCAGACCGCACGCGGAGGTCACGC
CCGCTCAGAGTCGGCTCCTGCTCGAAGAGACGCACCGGCTTCGCTCCGAG
CGGGACTTGTTGTTGTCCACCGGGAACTACGGGCCCGAGGACCCCATCAT
ACAGACACTTACACGCCTGATCCAGGAGCGTGAGAGTGCCAGCGCTGCAA
GGGCTGCCGAAGCAGCCAACGAGTCACAGGCGTCAACAATCACCTTCGAA
GCTCCTTCGCGAGAAGCGCAGTCGCGACAGGCTGTGTAG back to top
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