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Properties
| Property Name | Value |
|---|
| Product | serine threonine protein |
| Orig transcript id | gnl|cribi|Naga_100004g82.9074.mrna |
| Orig protein id | gnl|cribi|Naga_100004g82.9074 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002459.1 | supercontig | CM002459.1:403306..407087 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2447 ID=rna2447|Name=rna2447|organism=Nannochloropsis gaditana|type=mRNA|length=1763bp
GATGGAAGGTGCAACGGCAATCTGCCAATTTTGTGATTGTGCATGAGAGA
ACAGGATCGGAAAGCGTGGGTATAGCCCCTCTCAATGCGGGGCGTGGAAC
GAACGAGACTTCCGGCTAGAAGCCCCTCAAGCCATGAACGCTTGAAGCAG
CGGGGGGCGGTCGAAAATAGCCTCAAGGTGCCCGGAGCTCTCATTCTTTC
CAATTACTTACTCGCTCGCTAGTCGTGTCAAGTAATCAGAGCGCTTTTCC
ACTGTTTCCTTTGTCTTTTCCAGCTGGACTCTGGCTCTGTGTGGCACCTC
CATGGGGCCTGGGGGGAGGTCACGACGGCCGTGGCCCCTCCTACTAGGAG
TGATGCTACCTGCCGTCTTTTTCCTTTTACCGCCTTCGACGTACGGTTTT
CGGTCAACTTATCTCCCGCGTCCAATTTTGAGGCTGGTGGAAGCTCCGGT
TATAAGGCCCTCCGTCGCCGTCCCTCCACAGAGAAGTTGTGGCTTCCCAG
TATACGCTTATACCTCCCTGCAGCCCGCAGCTTGCACCCATCTGTGGTCC
ACTCGAGATGGGGAGCACAGCAAGAGAAGAAAGGCCACCATCCTGGCAGC
GGCCAAGAGCTTATATTTCCCTGCGTACGTGCTGCTGGCGGGCCTTCTGG
GCGTGACGCGGCCCCAGCTGTACGCCGGCTTGAGCGAGGGTTTTATCACA
CGCGCCCTCTCGGCTGTGATGGTCCTGATGGGCATGACACTCTCCATGGA
CGATTTTGCACGCATCGGAAGAAGCAAACGAGCCGTTGTCCTGGGATGGT
GCGCCCAATTTTCAATCATGCCCGGTATGGCCTTGATAATGTCGCGCGTC
TTCAGGCTCCCCCCCCATCTGGCTGCAGGAGTCATCCTCGTTGGCTGCTG
TCCCGGCGGCACTGCGTCCAACCTGGTGACCCTCTTGGCCGAGGCCGACG
TGGCTCTCAGCATTAGCATGACGGCGGTCTCCACGCTCACGGCGGGCGCG
ATGACGCCGCTACTGACCTCTCTCCTCCTGGGCTCCCTCGTCCCTGTGGA
CACCGCCGCCCTGCTCCGCACCACCCTGCAAGTCGTGCTCCTCCCCGTCG
CCCTCGGACTCGTCACCAACTCCTACTTGCTTCCCTCCCTCCCCCCCTCT
CTGACCCGAGGCCTCACTCGCTCCACCCCACTAGTTTCAGGCCTGCTGGT
GGCAGCGATCTGCGGCAAGGTCGTGGCCACCAACGCCGCAGCCGTGCTCC
AGTCCGGCGGGTCCCTCCTCGGGGCCGTGCTCGCCCTCCATTCCTTCGGT
TTCTTTTTCGGTTTTTGGATGGCCCGGGCCCTGGGCTTCTCCAGGCAGGT
GGCCAAGACCGTCTCCATCGAGACCGGCATGCAGAACAGCGCCTTGGCGG
TCGTCCTCGCCCGCAGCAGCTTGCCGCACCCGCTGTCGGGCCTACCGGGC
GCCGTCTCCGCCGTCTGCCACTCCGTGCTCGGAAGCCTGGCGGCGTGGGT
CTGGAGCCGCGAGGGGGATCGGGGGGGGAAGGGGGCCAAGGGATGAAGGG
GGAAAAACAGGCGCCTGGCCTTGTACAGGGTGGCGGGGGCTGCTGGGGAG
GGTGAGGGGGTGGGACCAAGGTGCCAGGGCGGTGAGAGGCCTCCAGGATG
ATCACTGTCGCCATCCTGGCCATGAAAGGAATCTTACGAACGAGACTGCG
TGCAGCGATGCTTTATTTCACTTCCTTTGTGATGGCTGTCTACCTCTTCT
TCCCCCGCAACCC back to topprotein sequence of rna2447 >rna2447-protein ID=rna2447-protein|Name=rna2447|organism=Nannochloropsis gaditana|type=polypeptide|length=882bp
MSYGIAIGRRRGRCTYRKRGPSWQREARGGGRGREHGDFPPSDSIVQEGS
AMHRAPGTGGARASGESGHGRGPGTDQGGAPDARPGDTGGPRPRPQQQER
GKHVSLDRGAGSASPLSRAQSLPPSPSPRSSTSPPAASRPARPEPPREED
AEALSDFARLCKALSMSAKDYPGTDEGLALVFGPDTLALSSPPPSLPLRP
AGKASGFGERISSPGRTARAGPPPIRLPLTNEVTEMEAQAAEAAAGSGPP
APPRGYGGEDGGGKKEAPRRVPARSVYGAFYKHREGRDREAPDAGRPRGS
LGGRLSLSSPRVQQQRWKEGRLQEDSEGEGLGEGEEEEGRVGEEVLAPME
SLGLRKRHPPARTAAAGDRGARHRGGEGDGGEGTEGRAPWQGREESGEKW
GRSGELGGEAAADEDEEASDEEDLALAGPGPGGGGLKGRRRGSGPAPVDP
ARTEEKVLRDCRVVSSHIKDAKLTEYIKDKKKARSSRDRFLADTGLVRSE
VHPPQRFIEVYYNSWADDFYTAITTSSAAFGPRWWFREALGQEPQEVMAW
VREWEAQARKHQVLSEGVGEVLKEAMAVGGAEEGNPTVEMERFLALKARL
RERREPKIIVIGDVHGCVEELRALIKKVEYSPGDLLVFLGDMVAKGPDSI
PVIRLAREVGALSVRGNHENEVIRWSRALALGAQSNFKSEHYLIAMGLED
ADVEWLRNLPWYISCSDLQLLFVHAGFVADQRLSKQHPRFMINMRSILAD
GTVSARYYQDYPWARTWQGPQTVLFGHDARRGMQEYEQALGLDTGCVYGG
NLTACILPGKELVQVPAAEPYIVNRYDRIMKRARVLQKEGVGGRRWTDGE
EMDLEEIAAGEGMEGDEDGGTEGEQGGRGRRQ back to topmRNA from alignment at CM002459.1:403306..407087+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2447 ID=rna2447|Name=rna2447|organism=Nannochloropsis gaditana|type=mRNA|length=3782bp|location=Sequence derived from alignment at CM002459.1:403306..407087+ (Nannochloropsis gaditana)
CATGCACAATCACAAAATTGGCAGATTGCCGTTGCACCTTCCATCCATGC
TGTCGCCGCGGTGATATATCACAGATCGTGGAGGGGCGCTCTATCATTAG
CCGACACAACCCCCTCTCCACTTCGGAGGGCAACAACAATAGCATTGACC
GGGTGATAAACAGGCTCGCGTTGACCGGGGTACACGATCCAAATGAGGTT
TGGGCATGCATCGTACGTCTGTGGAGGGTCCTTACAACGCAATCACGATT
TCGTCCGGCTCTTGCCTCTTATCTAATGTCTCCCTCGCAACCCCTATGGC
TAGGTCGGCCGTGTTGCCTCATCAAAGACGGATACCCTGTGGCCTTGTCG
TACTATTCTGGACTTGGTGTGCTTGGGAAACGTTGCAGGTGCATGGATGG
TGCGATATCCGGCTGGGAGTGAGACAGAGGCATGCATCCCACGAGCCACG
GctcgcgtccttccccccccctccgagcTCGACAGCCtgggccttcccct
cctggcggcgcaggagaagggacAAAAATCTTGGGTACTCGCTGCttgaa
ggcggtgggaagcCCTCGACTAGTGTTCTGTTCGCAGAGGCCGGCATTGA
GAGTAATGgagagggccgggggggcgtggGTAAGAACCGCACGAGCAGGA
CAAGCGGCGGCCACAGCTCCCACCACGGAAGGCACAGGGGGGAGTCGCGA
AGGCAGGGTGGTGCACGCAAGAGTGGAAGACATGTGAGGCGTGGGTATGC
CCGGCAAGAACCATGTCCTACGGGATCGCCATTGGGAGGCGACGAGGACG
TTGTACATATCGGAAGAGGGGGCCCTCGTGGCAGCGGgaggcacgggggg
gggggcgaggccgtgAGCATGGCGATTTCCCACCGTCAGACTCGATCGTC
CAAGAAGGGTCTGCCATGCACAGAGCTCCTGGGACAGGGGGTGCCCGGGC
GTCGGGAGAGAGCGGTCACGGGCGAGGGCCCGGGACGGATCAGGGCGGTG
CCCCAGACGCTCGGCCGGGGGATACGGGcggacctcgtcctcgcccccaa
CAGCAAGAGCGGGGGAAGCATGTCTCCCTGGACCGAGGCGCTGGGTCggc
ctcgcctctttctcgcgCGCagtccttgcccccctccccttccccgcggt
cctccacctcccccccggccgcgTCGCGGCCCGCCCGTCCCGAGCCTCCt
cgagaggaggacgccgaagCCCTCTCCGATTTCGCCCGCCTCTGCAAGGC
CCTGAGCATGAGCGCGAAAGACTACCCGGGCACGGACGAGGGCCTGGCCC
TTGTCTTCGGGCCCGacaccctcgccctctcctctcctcctccctcgctc
ccgctgCGACCCGCTGGGAAGGCGAGCGGCTTCGGCGAGCGCATCTCCAG
CCCCGGAAGGACGGCTCGCGCAGGGCCTCCCCCTATCCGCCTGCCTCTGA
CCAACGAGGtcacggagatggaggcccAGGCTGCGGAGGCCGCCGCGGGC
TcaggccctccagccccccctcGGGGCtatggaggggaggacggcggggg
caagaaggaggcgccGCGGAGGGTGCCAGCCCGGAGTGTGTACGGCGCCT
TTTACaagcacagggaggggcgggaccGCGAGGCGCCAGATGCGGGGAGG
CCCCGGGGCTCCTTGGGGGGGCGTCTCAGCTTGTCCAGCCCCAGggtgca
gcagcagcggtggaaggaagggcgattgcaggaggacagcgaaggggagg
ggctcggggaaggagaagaggaggaggggcgggtgggcgaggaagtgcTT
GCGCCGATGGAGTCGCTGGGGTTGCGGAAGCGGCATCCACCGGCAAGGAC
GGCCGCGGCCGGTGATCGCGGAGCACGGCAccgaggcggggagggagacg
gtggggagggaacggagggcagggcgccatggcaggggcgggaagaaagc
ggGGAGAAATGGGGGAGAAGCGGCGAgttgggaggggaggcagcagcgga
cgaggacgaggaagcgagcgacgaagaggactTGGCGctggcggggccgg
ggccggggggcgggggcctgaagggcaggaggaggggcagcggccCGGCG
CCCGTGGACccggcgaggacggaggagaaggttcTGCGCGACTGTCGGGT
GGTGTCGAGCCACATCAAAGACGCCAAGCTTACGGAGTACAtcaaggaca
agaagaaagcgCGCTCGAGCCGGGACCGGTTCCTGGCGGATACGGGGCTG
GTGCGTTCCGAGGTCCACCCCCCCCAGCGGTTCATCGAGGTGTATTACAA
CAGCTGGGCGGACGACTTCTACACGGCCATCACCACATCCTCGGCCGCCT
TCGGCCCTCGGTGGTGGTTTcgggaggcgctggggcAGGAGCCGCAGGAA
GTGATGGCGTGGGTGAGAGAGTGGGAGGCTCAGGCCCGGAAGCACCAGGT
CCTGagcgagggagtgggggaggtgctgaaagaggcgatggcggtgggag
gggcggaagagggcaaCCCAACCGTGGAGATGGAGCGATTCTTGGCGCTG
AAGGCACGAttgagggagcggagggagccCAAGATCATCGTCATCGGCGA
CGTGCACGGCTGTGTGGAGGAGCTCCGGGCGTTGATCAAGAAGGTGGAGT
ACAGCCCCGGGGACCTGCTCGTCTTCCTGGGGGACATGGTCGCCAAGGGA
CCGGACTCCATCCCCGTGATCCGCCTGGCCAGAGAGGTGGGCGCGCTCTC
CGTGCGGGGGAACCACGAGAACGAGGTCATCCGCTGGAGTCGGGCCTTGG
CCCTAGGGGCGCAGAGCAACTTCAAGTCGGAGCACTACTTGATTGCGAtg
gggctggaggacgcggacgtGGAGTGGCTGCGGAACTTGCCCTGGTACAT
CTCCTGCTCGgacctccagctcctcttcgtccacgccGGCTTCGTCGCCG
ATCAGCGGCTCAGCAAGCAACATCCTCGCTTCATGATCAACATGCGATCC
ATCCTGGCGGACGGGACGGTCAGTGCCCGCTACTACCAGGACTACCcatg
ggcgaggacgtggcagGGGCCGCAGACGGTCCTGTTCGGGCACGACGCGC
GCAGGGGCATGCAAGAGTACGAGCAGGCGCTGGGTCTGGATACCGGGTGC
GTGTATGGAGGCAACCTGACGGCCTGTATCTTGCCGGGCAAGGAGCTAGT
ACAGGTACCTGCGGCGGAGCCGTACATAGTGAATCGGTACGATCGCATTA
TGAAGCGTGCCCGGGTGTTGCAgaaagagggcgtggggggacgGCGGTGG
ACTGATggcgaggagatggacctggaggaaatAGCAGCCGGGGAAGGCAt
ggaaggggatgaagacgGAGGCACGGAAGGAGAACagggggggcgtggga
gaagaCAGTAGGAGTCGGTCgaaagagggcgtggacgaccAGTGTAAGTA
CTGCCAACATGTATCACAAGAGGATGCAGCCTGGGCTtcgggagggcgaa
ggagagccGGCGTTGTGTCCCTCGGTGGCGTTCGGAAGGGCGCACGGGGG
ATAACACGGTCATGCTTCGACTCGTAGGGGCTCTATTGGCTCCAGGCTGG
CCTCATACGCTAGTGGTGCGATCAGTAGACCACTAGGTCACCGAACAGGC
AAAAGGTCATGCTAACTGCGGCAGCAAGAGCAGTAGCAGCAACGGGAGGC
AGTCTCCCAACATGAAAGCAACGCTCGACACGACACACGAATAAAAAGTG
TCACGAAAAACACACCAGCGAGTAACTCCCGC back to topCoding sequence (CDS) from alignment at CM002459.1:403306..407087+ >rna2447 ID=rna2447|Name=rna2447|organism=Nannochloropsis gaditana|type=CDS|length=2649bp|location=Sequence derived from alignment at CM002459.1:403306..407087+ (Nannochloropsis gaditana)
ATGTCCTACGGGATCGCCATTGGGAGGCGACGAGGACGTTGTACATATCG
GAAGAGGGGGCCCTCGTGGCAGCGGgaggcacgggggggggggcgaggcc
gtgAGCATGGCGATTTCCCACCGTCAGACTCGATCGTCCAAGAAGGGTCT
GCCATGCACAGAGCTCCTGGGACAGGGGGTGCCCGGGCGTCGGGAGAGAG
CGGTCACGGGCGAGGGCCCGGGACGGATCAGGGCGGTGCCCCAGACGCTC
GGCCGGGGGATACGGGcggacctcgtcctcgcccccaaCAGCAAGAGCGG
GGGAAGCATGTCTCCCTGGACCGAGGCGCTGGGTCggcctcgcctctttc
tcgcgCGCagtccttgcccccctccccttccccgcggtcctccacctccc
ccccggccgcgTCGCGGCCCGCCCGTCCCGAGCCTCCtcgagaggaggac
gccgaagCCCTCTCCGATTTCGCCCGCCTCTGCAAGGCCCTGAGCATGAG
CGCGAAAGACTACCCGGGCACGGACGAGGGCCTGGCCCTTGTCTTCGGGC
CCGacaccctcgccctctcctctcctcctccctcgctcccgctgCGACCC
GCTGGGAAGGCGAGCGGCTTCGGCGAGCGCATCTCCAGCCCCGGAAGGAC
GGCTCGCGCAGGGCCTCCCCCTATCCGCCTGCCTCTGACCAACGAGGtca
cggagatggaggcccAGGCTGCGGAGGCCGCCGCGGGCTcaggccctcca
gccccccctcGGGGCtatggaggggaggacggcgggggcaagaaggaggc
gccGCGGAGGGTGCCAGCCCGGAGTGTGTACGGCGCCTTTTACaagcaca
gggaggggcgggaccGCGAGGCGCCAGATGCGGGGAGGCCCCGGGGCTCC
TTGGGGGGGCGTCTCAGCTTGTCCAGCCCCAGggtgcagcagcagcggtg
gaaggaagggcgattgcaggaggacagcgaaggggaggggctcggggaag
gagaagaggaggaggggcgggtgggcgaggaagtgcTTGCGCCGATGGAG
TCGCTGGGGTTGCGGAAGCGGCATCCACCGGCAAGGACGGCCGCGGCCGG
TGATCGCGGAGCACGGCAccgaggcggggagggagacggtggggagggaa
cggagggcagggcgccatggcaggggcgggaagaaagcggGGAGAAATGG
GGGAGAAGCGGCGAgttgggaggggaggcagcagcggacgaggacgagga
agcgagcgacgaagaggactTGGCGctggcggggccggggccggggggcg
ggggcctgaagggcaggaggaggggcagcggccCGGCGCCCGTGGACccg
gcgaggacggaggagaaggttcTGCGCGACTGTCGGGTGGTGTCGAGCCA
CATCAAAGACGCCAAGCTTACGGAGTACAtcaaggacaagaagaaagcgC
GCTCGAGCCGGGACCGGTTCCTGGCGGATACGGGGCTGGTGCGTTCCGAG
GTCCACCCCCCCCAGCGGTTCATCGAGGTGTATTACAACAGCTGGGCGGA
CGACTTCTACACGGCCATCACCACATCCTCGGCCGCCTTCGGCCCTCGGT
GGTGGTTTcgggaggcgctggggcAGGAGCCGCAGGAAGTGATGGCGTGG
GTGAGAGAGTGGGAGGCTCAGGCCCGGAAGCACCAGGTCCTGagcgaggg
agtgggggaggtgctgaaagaggcgatggcggtgggaggggcggaagagg
gcaaCCCAACCGTGGAGATGGAGCGATTCTTGGCGCTGAAGGCACGAttg
agggagcggagggagccCAAGATCATCGTCATCGGCGACGTGCACGGCTG
TGTGGAGGAGCTCCGGGCGTTGATCAAGAAGGTGGAGTACAGCCCCGGGG
ACCTGCTCGTCTTCCTGGGGGACATGGTCGCCAAGGGACCGGACTCCATC
CCCGTGATCCGCCTGGCCAGAGAGGTGGGCGCGCTCTCCGTGCGGGGGAA
CCACGAGAACGAGGTCATCCGCTGGAGTCGGGCCTTGGCCCTAGGGGCGC
AGAGCAACTTCAAGTCGGAGCACTACTTGATTGCGAtggggctggaggac
gcggacgtGGAGTGGCTGCGGAACTTGCCCTGGTACATCTCCTGCTCGga
cctccagctcctcttcgtccacgccGGCTTCGTCGCCGATCAGCGGCTCA
GCAAGCAACATCCTCGCTTCATGATCAACATGCGATCCATCCTGGCGGAC
GGGACGGTCAGTGCCCGCTACTACCAGGACTACCcatgggcgaggacgtg
gcagGGGCCGCAGACGGTCCTGTTCGGGCACGACGCGCGCAGGGGCATGC
AAGAGTACGAGCAGGCGCTGGGTCTGGATACCGGGTGCGTGTATGGAGGC
AACCTGACGGCCTGTATCTTGCCGGGCAAGGAGCTAGTACAGGTACCTGC
GGCGGAGCCGTACATAGTGAATCGGTACGATCGCATTATGAAGCGTGCCC
GGGTGTTGCAgaaagagggcgtggggggacgGCGGTGGACTGATggcgag
gagatggacctggaggaaatAGCAGCCGGGGAAGGCAtggaaggggatga
agacgGAGGCACGGAAGGAGAACagggggggcgtgggagaagaCAGTAG back to top
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