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Properties
| Property Name | Value |
|---|
| Product | mrna capping enzyme family protein |
| Orig transcript id | gnl|cribi|Naga_100004g74.9097.mrna |
| Orig protein id | gnl|cribi|Naga_100004g74.9097 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002459.1 | supercontig | CM002459.1:389018..391366 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2439 ID=rna2439|Name=rna2439|organism=Nannochloropsis gaditana|type=mRNA|length=969bp
ATGACATTTCTTCCGTTTCATCACCTAGTAACACGGCGCCTGGGGATGTA
CAGGAGTGGTGGTAAAGGCGCATGGCTTTTCTTGCCTACCTCGTCCTCGG
CAAGATCAAGGCCGGGACGTCTGCGGCCCTTTCACGCCGCCTTCAGCACG
AGTGCAGGCGCGCAACATTCAGAAGAGGAGAACGAGGACCATGAGAGCTC
TCTTGCAAGGGCTGGGATCAGTGCCTTCAAGAGAGCGGTGCTGGCCAGGC
ATTCCACCAAAGCCTTTGACGCCAAGCGCGAGATTGCGGACGAGACGTTG
GCTGCCATTTTGGCTTTGACCCTTCGATGCCCGACAAGCTTCAACGTGCA
GCCATACACTGTGACAATCGTCCAGTCTGAAGATACGAAGCAGAAACTGG
CAGCCTGTATGCTAGGGCCCAACAGTGCCCGTGTCCTCCAAGCACCCGTC
ACGGCCGTATTTGCTGCGGATCTGGATCCTGTCCAGCTTGTCCCTCGCGT
TCAGTCTTTGGAGAGAAGAAAGCGTGGGCTCCCAGAGGCTTATCTGGCCA
CCCTCCCCTTCAGCGTCGCATTCTTGGCTGGAAAGGGCCACTTGGCGCAC
GCCTTCAAGGACCTGTTCACCACCGCCATGTCGCCCTTGCAGCCTATGCC
CTCGGTCAGCACCCTGGAGGCCTGGTCCTACAAAAATACGGCGATCGCCG
CGTCCTGGTACATGCTCGCGTGCAGCGTGCACGGCCTGGACACCTGTCCC
ATGGAGGGCTTCGACGGTCGTCGCATCATGCACGAGCTCCACATCCCGGC
CTCGCGTTACGCCATTCCCCTGGTCGTCTCCACCGGCTTCGCGATGCCGC
TGCCGTCGAGCAGTCCGGAGCGGAATAAAGAGGCGAAAAGATCTCCGCGA
TTTCCACCAGAGGCGGTCGTCTTCAAGGACCAGTACGGGCACGCTTACAA
AGGAATATCTCAGCTGTGA back to topprotein sequence of rna2439 >rna2439-protein ID=rna2439-protein|Name=rna2439|organism=Nannochloropsis gaditana|type=polypeptide|length=701bp
MATPLPPEAPPVHSLIQKGAMLHKFSVVDDSSNATLIGTFLDDTQGPPSQ
SILNHLICRNEYEKNLPLVTSLSFFGLVAYSKEKDYRRVSDFVSYLQGRK
KAAKVQLDKVGTVGYLFPGPSPTTPSGVPCLRCHYQPNHPLPTTDKKKRA
APTSPAARTIDPNSAHDTGMAPTSPPAESTAKRGRTSVPRAKFTYLPPDP
LPVSTTSPTTSQESDENAVTPSLGGEESSSHTCPPSPPPALPDPSQFPRS
RDPRFAYAPPTPVEGQVVPPFYDDPGSCPVVRGLEPPEEADVSRGGSSGY
PTSAKADDTGKDAGVLGRRAAAPSTETGNSGWGKDQRVAEGFYNQLRREK
GARNQSLVFHLRKLNNWVKSQLINGLRPATSETGQGQGRRELEVLDLACG
KGGDFTKWREVSRRFPVARYVGVDIAKTSLIDAIGRYHQDRHIRAALGAT
LTLACADLGSMDLVEDELEVWEATEDAWSRRPLLDEGDLFDAVTMQFALH
YMFEDEGRARFFLKTVARHLRVGGTFIATTVDARVVVEMMAGLGRKEEGG
EWVARLVDEEKRELCRLQVDDATYWQLFRPCPGMQEGSEEQSKDEQVGGD
SPFCGLRYKFLLKDGSEEDGAGDAVNAPEWMIPLPLLEAAAGEYGLRLEQ
AQNFHELVEEHRAQADGKRGGIHWLNYQGSISPIEWEIARIYIALKFTRV
Q back to topmRNA from alignment at CM002459.1:389018..391366+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2439 ID=rna2439|Name=rna2439|organism=Nannochloropsis gaditana|type=mRNA|length=2349bp|location=Sequence derived from alignment at CM002459.1:389018..391366+ (Nannochloropsis gaditana)
ACTGCCTCCTGATGAAAACGCCGTGTTCTTTCATGCTGTACTGGTCGCCC
TGACATCAGTATCTTGAAATAAGTGTCCACGTGCCAGCTTTCGCTTGTTA
TGCTCGCCACAATGGGTCATTTCTCACATTCAACGTTCCCTCACGCAGAG
CGTAGTGACTCGAGTTATGGCaactccccttccgcccgagGCCCCACCGG
TACATTCTCTCATACAGAAGGGAGCGATGTTGCACAAATTCTCTGTGGTT
GACGACAGCAGTAATGCAACCTTGATTGGGACGTTTCTGGATGACACTCA
AGGCCCTCCAAGTCAGTCAATCCTCAATCATCTCATATGCCGCAATGAGT
ACGAGAAGAACCTTCCCCTCGTTACCTCCCTCAGCTTTTTTGGACTCGTG
GCTTATTCGAAAGAGAAGGATTACAGACGTGTGAGTGATTTTGTCAGCTA
TCTGCAGGGTCGGAAGAAAGCTGCCAAGGTTCAATTGGATAAAGTAGGGA
CGGTCGGCTACCTCTTCCCggggccctcccccaccactCCCAGCGGCGTT
CCCTGCTTGCGGTGCCACTACCAGCCCAACCACCCCCTTCCAACGACTGA
CAAAAAGAAGCGCGCTGCCCCGACGTCACCTGCGGCTAGGACCATAGATC
CAAACTCAGCACACGACACGGGCATGGCCCCTACATCTCCTCCGGCTGAG
TCGACGGCAAAACGGGGCCGGACCTCGGTACCGCGGGCTAAGTTTACGTA
CTTGCCGCCAGATCCACTACCGGTCTCAACAACAAGCCCAACGACTTCCC
AAGAGTCAGACGAGAACGctgtcaccccctcccttggggGAGAAGAGTCG
AGCAGCCACacctgtcctccttccccgcccccggccctccccgaCCCGTC
CCAATTCCCTCGCAGCCGGGACCCGCGGTTTGCCTATGCGCCTCCAACTC
CCGTGGAAGGGCAAGTCGTCCCGCCCTTTTACGACGACCCGGGCTCGTGT
CCGGTCGTGCGGGGACTCGAGCCgcccgaggaggcggacgtcTCGAGAGG
GGGGTCCTCGGGATACCCCACGAGCGCAAAGGCCGACGACACCGGCAAGG
ATGCAGGAGTCCTTGGGAGAAGAGCTGCAGCGCCATCGACGGAGACGGGC
AACTCTGGATGGGGCAAGGACCAGCGCGTGGCGGAAGGGTTCTACAATCA
GCTccggcgggagaagggggctcGGAACCAGAGTCTGGTCTTCCACCTGC
GCAAGCTCAACAACTGGGTCAAGTCCCAGCTCATCAATGGCCTGCGACCT
GCCACCTCGGAGACGGggcaagggcaagggaggcgggagcttGAGGTCCT
GGACCTCGCCtgtgggaagggcggagacTTCACCAAGTGGCGGGAGGTGT
CGCGTCGGTTCCCCGTCGCCCGCTACGTGGGCGTCGACATCGCCAAGACC
TCCTTGATAGACGCGATCGGTCGATACCATCAGGACAGGCACATTCGAGC
GGCCTTGGGTGCGACGCTGACGTTGGCCTGCGCGGATTTGGGGAGCAtgg
acctggtggaggacgagctggaggtgtgggaggcTACAGAGGACGCCTGG
AGCCGGCGGCCCTTGCTCGACGAAGGCGACCTTTTCGACGCTGTGACCAT
GCAGTTTGCCTTGCACTACAtgttcgaggacgaggggcgtgCCCGCTTTT
TTTTGAAAACGGTGGCCCGACACCTCCGGGTAGGCGGCACCTTCATCGCC
ACCACGGTGGACGcgcgggtggtggtggagatgatgGCGGGgttggggag
gaaggaagaaggtggggagTGGGTGGCACGTTTGGTCGACGAAGAGAAGC
GGGAATTGTGCCGTCTTCAAGTGGATGACGCCACGTATTGGCAGCTTTTC
AGGCCTTGTCCTGGAATGCAAGAGGGGTCAGAAGAGCAAAGCAAGGACGA
GCAAGTCGGAGGAGACAGTCCTTTTTGTGGGCTGCGGTACAAATTTCTGT
TGAAGGACGGttccgaggaggacggcgctgGCGATGCAGTGAATGCCCCC
GAGTGGATGATTCCTTTGCCTTTattggaggcggcggctggAGAGTACGG
TCTGAGGCTAGAGCAGGCGCAGAATTTCCACGAGCTCGTGGAAGAGCACA
GGGCCCAAGCcgacgggaagagaggggggataCACTGGCTGAATTATCAG
GGTAGTATCAGTCCAATAGAATGGGAGATAGCTCGAATATACATTGCCTT
AAAGTTTACGCGTGTGCAGTGATATAAGTGGAGACAAAGACAAGTCAAAG
TATTTAATCACAAAATAGATAAACCCATGAATCTGACAGCTGGGAATTG back to topCoding sequence (CDS) from alignment at CM002459.1:389018..391366+ >rna2439 ID=rna2439|Name=rna2439|organism=Nannochloropsis gaditana|type=CDS|length=2106bp|location=Sequence derived from alignment at CM002459.1:389018..391366+ (Nannochloropsis gaditana)
ATGGCaactccccttccgcccgagGCCCCACCGGTACATTCTCTCATACA
GAAGGGAGCGATGTTGCACAAATTCTCTGTGGTTGACGACAGCAGTAATG
CAACCTTGATTGGGACGTTTCTGGATGACACTCAAGGCCCTCCAAGTCAG
TCAATCCTCAATCATCTCATATGCCGCAATGAGTACGAGAAGAACCTTCC
CCTCGTTACCTCCCTCAGCTTTTTTGGACTCGTGGCTTATTCGAAAGAGA
AGGATTACAGACGTGTGAGTGATTTTGTCAGCTATCTGCAGGGTCGGAAG
AAAGCTGCCAAGGTTCAATTGGATAAAGTAGGGACGGTCGGCTACCTCTT
CCCggggccctcccccaccactCCCAGCGGCGTTCCCTGCTTGCGGTGCC
ACTACCAGCCCAACCACCCCCTTCCAACGACTGACAAAAAGAAGCGCGCT
GCCCCGACGTCACCTGCGGCTAGGACCATAGATCCAAACTCAGCACACGA
CACGGGCATGGCCCCTACATCTCCTCCGGCTGAGTCGACGGCAAAACGGG
GCCGGACCTCGGTACCGCGGGCTAAGTTTACGTACTTGCCGCCAGATCCA
CTACCGGTCTCAACAACAAGCCCAACGACTTCCCAAGAGTCAGACGAGAA
CGctgtcaccccctcccttggggGAGAAGAGTCGAGCAGCCACacctgtc
ctccttccccgcccccggccctccccgaCCCGTCCCAATTCCCTCGCAGC
CGGGACCCGCGGTTTGCCTATGCGCCTCCAACTCCCGTGGAAGGGCAAGT
CGTCCCGCCCTTTTACGACGACCCGGGCTCGTGTCCGGTCGTGCGGGGAC
TCGAGCCgcccgaggaggcggacgtcTCGAGAGGGGGGTCCTCGGGATAC
CCCACGAGCGCAAAGGCCGACGACACCGGCAAGGATGCAGGAGTCCTTGG
GAGAAGAGCTGCAGCGCCATCGACGGAGACGGGCAACTCTGGATGGGGCA
AGGACCAGCGCGTGGCGGAAGGGTTCTACAATCAGCTccggcgggagaag
ggggctcGGAACCAGAGTCTGGTCTTCCACCTGCGCAAGCTCAACAACTG
GGTCAAGTCCCAGCTCATCAATGGCCTGCGACCTGCCACCTCGGAGACGG
ggcaagggcaagggaggcgggagcttGAGGTCCTGGACCTCGCCtgtggg
aagggcggagacTTCACCAAGTGGCGGGAGGTGTCGCGTCGGTTCCCCGT
CGCCCGCTACGTGGGCGTCGACATCGCCAAGACCTCCTTGATAGACGCGA
TCGGTCGATACCATCAGGACAGGCACATTCGAGCGGCCTTGGGTGCGACG
CTGACGTTGGCCTGCGCGGATTTGGGGAGCAtggacctggtggaggacga
gctggaggtgtgggaggcTACAGAGGACGCCTGGAGCCGGCGGCCCTTGC
TCGACGAAGGCGACCTTTTCGACGCTGTGACCATGCAGTTTGCCTTGCAC
TACAtgttcgaggacgaggggcgtgCCCGCTTTTTTTTGAAAACGGTGGC
CCGACACCTCCGGGTAGGCGGCACCTTCATCGCCACCACGGTGGACGcgc
gggtggtggtggagatgatgGCGGGgttggggaggaaggaagaaggtggg
gagTGGGTGGCACGTTTGGTCGACGAAGAGAAGCGGGAATTGTGCCGTCT
TCAAGTGGATGACGCCACGTATTGGCAGCTTTTCAGGCCTTGTCCTGGAA
TGCAAGAGGGGTCAGAAGAGCAAAGCAAGGACGAGCAAGTCGGAGGAGAC
AGTCCTTTTTGTGGGCTGCGGTACAAATTTCTGTTGAAGGACGGttccga
ggaggacggcgctgGCGATGCAGTGAATGCCCCCGAGTGGATGATTCCTT
TGCCTTTattggaggcggcggctggAGAGTACGGTCTGAGGCTAGAGCAG
GCGCAGAATTTCCACGAGCTCGTGGAAGAGCACAGGGCCCAAGCcgacgg
gaagagaggggggataCACTGGCTGAATTATCAGGGTAGTATCAGTCCAA
TAGAATGGGAGATAGCTCGAATATACATTGCCTTAAAGTTTACGCGTGTG
CAGTGA back to top
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