|
|
Properties
| Property Name | Value |
|---|
| Product | inosine-uridine preferring nucleoside hydrolase |
| Orig transcript id | gnl|cribi|Naga_100004g71.9150.mrna |
| Orig protein id | gnl|cribi|Naga_100004g71.9150 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002459.1 | supercontig | CM002459.1:384621..386049 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2436 ID=rna2436|Name=rna2436|organism=Nannochloropsis gaditana|type=mRNA|length=2432bp
TATTCTTGCCGATATCGAAAGAAGGAATACATCCATTTTTTGGGATAGAC
TAGGGTCTGGAAACTCCCCTTTTCATCATCCCGGCCGGGGCCGGGACGGT
GGTGCCCCAGTGACGTCCCTTCAACTTGGAAGAAATGTGGTGCGATTCAT
TGATCATCACCACCTACGCATAATCACAGGCGTCAAGATATTTCCTTTTT
TAGCCACCGCGAGGTGGTCCGTCGCAGTCTCGTTTCCTGGCCGTCTGTAT
TAACGACGTGTAATTATCCTAACCTGTTGTTCGCTCCTCTCGATCTGGAG
GCATGCCACGGTTGGAAAGAACGCCCTGAATCCAAAACAAGCCACGCAGT
CATTTGTGCTTGCACATTTTGTTTGAACTAAGCTTGGTAGCATGTCCTCT
GCATCTGGCGCGGCGGGTGCGGCGGCTATGGTTGCTCAGCACGATGGAGG
CCGCCGGCGCGTGATATTGCTGGGATGCGCTGCTTCGTTTTTTGTAACAT
ACCTCCTCCGTCGATCCCGCTCGAAAGCAGTAGGCTCGGGGAAGGGTGGC
GGTGTCTTTAAGTCTACGTCCGAAAGAACCTTTCGGAGATATCCTCAAAA
CTCGCCTAGTGTTGGGCCGCGCAATGGCGCCCCTGGCGAAGAGGGACGGC
ACGCCGGCACCGCAGCAGCAGCAGGAGGGAGGGTGGGACCATTGACCTCG
TCCGGTTTGAACAATACCTTAGACTTTTCGCACCCGGACGGCCCCAACAT
CGGCCCGGCGTCGGACCCCGGGTGGTTGGAGAACCACGACCAAGAGGGTC
TCCCGGTCAAGACGGACCTCCTGCACACGGGGCACATGAAGGGAGGAAAG
CTCTTGATTTGCGTCATCGGACTGCCAGCACGGGGGAAGACCTACATCGC
TCGGAAGGTGGCGCGGTACCTCCGGTGGATCAACTATCGCACGCGTGTGT
TCTGTCTGGCCAGGTACCGCCAAGACAAGTACGGGCACAAGCAGGCCGCC
GAGTTCTTCGACACCGCCAACAAGGAGTACACGTCCTCGCGCATGGAGCT
CTTGGCCTGTGCCTTGGACGATTCCGTCGGCTATTTGAACAGGGGGGGGG
AGGTGGCTATTCTGGATGGGACCAACGTGACGGAGGCGCGGCGGAACGCG
ATCCGGGAGAGGCTGCAGAGGGAGGACGGATATGAGATCTTGTGGATCGA
GTCCATCTGCGAAGATCCCCAGGTGATCGCCCACAACGTCGCTCAGCTTC
GGGAGGCATCGCCGGACTACGTCGCCGACCATGACTTCGAGCGCCGCATC
GCCTTCTACAAGATCGACTACGTGCACGTGCGGGAGGAGGAGGGAAGCTA
TGCGAAAGTCTTCGATGCGGGTCGAAAGCTGGAGTTGAACCGCATCCACG
GCTTCTTGCCCACGAAAATCATCTCTTTTTTGATGAATTTGCACATCATG
CCTCGGCCAGTCTACTTCACCAGGCACGGTGAATCCATCTTCAACATCCA
CGGACTCATCGGCGGCGACTCCTCCCTTTCCCCAAAGGGAGAGAAATTCG
CCGATCTACTCTCTCTCTTCATCCACAACGAGCCGGAGCTCCCCCCCGAC
CAATTGAACGTCTGGACCTCCACCATGAAGCGCGCGAGAGCAACGGCTGC
CAAAATTAAGTGCGCGCGGTACGTGGAATGGAGGTCTCTGCGTGAGATTG
AAGTTGGTGTCTGCGACGGCCTCTCCTACGACCAGATCCGCGATAATTTT
CCTCAGGAGTACAAAGCCCGGGAGGTGGACAAACTCCGGTACCGTTATCC
TCGGGGAGAGAGCTATATGGACATTATCTCGCGGCTGGAATCGGTGATCT
TCGAGCTGGAGCGGCAGCAGGCCCCCGTCGTGATCGTGGCGCATCAGGCT
GTGCTTCGGTGTCTCTACGCATACTTCCTTGACCTGCCCCCAGAAGAGGT
GCCATACCTGGCGATCCCCTTGCACACAGTCATCAAAGTCACGCCCAAGG
CCTACGGATGTGCGGAGAAGCGGTACAAGATGATGGTGTGAGCGACAATG
ACGTGTCGAGCGGGGACATTTGATCAAGCCGGCGGGGACGTCGCCCAACG
AGAGGGTCAAGACAATTTGCAAGCGTAAGTGGATTTGTAGAGAACGGTCG
CACGACAGGGTTTAGGGAATGAAGCTGGCTCCTTCATTGAGTGTAGAATT
ATGCGCTGCAAAAGAATGGTAGCATCAAGAGATTCTTTTTTCTTTGTTGC
ATAGAGATGGGAGGCAGGATTGTGTAGGGGGGTGGTAGAGGGGCGGGGGG
GTGCCTCAAGATTATTAGGATAGAGAAAGCATGTGAAGTGCCGACATGAA
AGCTGCGTCCCTTTGTCAGTGCCGTGAAATGCAGACGCCTCCGCGAAAGA
AATCAAAGAAAGAGCGACGTACGATCAAAGGT back to topprotein sequence of rna2436 >rna2436-protein ID=rna2436-protein|Name=rna2436|organism=Nannochloropsis gaditana|type=polypeptide|length=370bp
MAYFSSRSGKPQKGAQEVAAAPTPSPPRRRFIIDCDPGVDDAIAILMAVS
EAARLDEQILAVTTVHGNVPLELTTKNAMKVLDVLPVQTPHFDSRRIPIF
RGCASPLIHSAHEYFPWHGLDGLGDAGLQDAESRHVESEHAALAMIRLCK
QYAGEVTLVCLGPLTSVALACKLDPTFPASVRQMIVMGGTTRAKGNVSLT
SEFNFHKDPEAAHIVLSSFPQSYMVSWETTEQHTVAWEFMEELLKQAEVS
CSSLGTFLRGITRPFLREKDRWRGALICDAVAMAVAIDPEVVMSVTECFV
DVELHGRYGRGQTVIDWEGQLKGKTEVGAANVKIVEKINMDRMHEMLLGI
VKTATALAKDPSNVKERVQE back to topmRNA from alignment at CM002459.1:384621..386049- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2436 ID=rna2436|Name=rna2436|organism=Nannochloropsis gaditana|type=mRNA|length=1429bp|location=Sequence derived from alignment at CM002459.1:384621..386049- (Nannochloropsis gaditana)
ATGGCCTACTTTTCCTCGCGTTCAGGGAAGCCTCAAAAAGGGGCACAGGA
AGTGGCTGCCGCCCCGACACCTTCTCCTCCTCGTCGTCGTTTCATCATTG
ACTGCGACCCCGGTGTCGATGACGCAATCGCCATCCTTATGGCAGTCAGT
GAAGCAGCTCGTTTGGATGAGCAAATCCTGGCAGTGACGACGGTTCATGG
GAACGTGCCTTTAGAGCTGACTACCAAGAACGCGATGAAAGTCCTCGACG
TCTTGCCAGTCCAAACGCCACATTTCGATTCTCGCCGCATCCCGATATTT
CGTGGTTGCGCTTCGCCTCTCATTCATAGCGCTCATGAATATTTCCCGTG
GCACGGGTGAGTGCTTCGACCGTGCTTTGAGGCGAATTCGATCGTTTTTT
TTTTCTTATTTTTCCTTTTTGTTTCTCATGGAAATCAGGCTCGATGGCCT
TGGTGATGCAGGTCTTCAGGACGCTGAATCTCGTCACGTGGAATCTGAAC
ATGCAGCACTGGCCATGATTCGCTTGTGTAAGCAGTACGCAGGTGAAGTG
ACCTTGGTATGCCTTGGTCCTTTAACAAGCGTCGCGCTGGCTTGCAAGCT
CGACCCCACCTTTCCTGCCTCAGTGCGCCAGATGATAGTGATGGGCGGTA
CGACTCGTGCCAAGGGTAACGTCAGTCTGACATCGGAGTTCAACTTTCAT
AAAGGTGAGACAAGGTATGAAGAATCCAATGAAGACGAAGGGGGCTTGGA
GGAGGCCGCGCTGACTGTTCCTCACTCTTGTTTCACACAGATCCGGAGGC
AGCTCACATTGTGCTCTCATCTTTTCCGCAAAGCTACATGGTAAGCATCA
GGACTGAAAGCTCCTTGAGTCGAGAGGACGATGTGCTGTATGGTCGTTGT
ACTCACGTGCAGATGCTCATCTTTGCATGGCTCAAAACCCGCGTTTGCCT
CCTCGATGCTCAACGGCACTTTCCTCTACCAACTCAAGGTATCGTGGGAG
ACCACTGAACAGCACACCGTCGCGTGGGAGTTCATGGAAGAACTTTTGAA
ACAAGCGGAGGTCTCCTGTTCCAGCCTTGGCACCTTTTTGCGCGGCATCA
CGCGACCATTTCTGCGTGAGAAAGACCGGTGGAGAGGTGCATTGATCTGT
GACGCTGTAGCCATGGCAGTTGCAATCGACCCAGAAGTCGTGATGAGCGT
CACTGAGTGCTTTGTGGACGTTGAATTGCACGGGAGGTACGGGCGGGGAC
AGACTGTAATTGATTGGGAAGGGCAATTAAAAGGAAAGACAGAGGTAGGG
GCTGCAAATGTCAAGATTGTTGAGAAAATTAACATGGATCGAATGCACGA
AATGCTTCTTGGCATCGTAAAAACGGCCACAGCACTTGCCAAGGATCCAT
CTAACGTAAAGGAACGCGTTCAGGAATAA back to topCoding sequence (CDS) from alignment at CM002459.1:384621..386049- >rna2436 ID=rna2436|Name=rna2436|organism=Nannochloropsis gaditana|type=CDS|length=4452bp|location=Sequence derived from alignment at CM002459.1:384621..386049- (Nannochloropsis gaditana)
GTATCGTGGGAGACCACTGAACAGCACACCGTCGCGTGGGAGTTCATGGA
AGAACTTTTGAAACAAGCGGAGGTCTCCTGTTCCAGCCTTGGCACCTTTT
TGCGCGGCATCACGCGACCATTTCTGCGTGAGAAAGACCGGTGGAGAGGT
GCATTGATCTGTGACGCTGTAGCCATGGCAGTTGCAATCGACCCAGAAGT
CGTGATGAGCGTCACTGAGTGCTTTGTGGACGTTGAATTGCACGGGAGGT
ACGGGCGGGGACAGACTGTAATTGATTGGGAAGGGCAATTAAAAGGAAAG
ACAGAGGTAGGGGCTGCAAATGTCAAGATTGTTGAGAAAATTAACATGGA
TCGAATGCACGAAATGCTTCTTGGCATCGTAAAAACGGCCACAGCACTTG
CCAAGGATCCATCTAACGTAAAGGAACGCGTTCAGGAATAAATCCGGAGG
CAGCTCACATTGTGCTCTCATCTTTTCCGCAAAGCTACATGGCTCGATGG
CCTTGGTGATGCAGGTCTTCAGGACGCTGAATCTCGTCACGTGGAATCTG
AACATGCAGCACTGGCCATGATTCGCTTGTGTAAGCAGTACGCAGGTGAA
GTGACCTTGGTATGCCTTGGTCCTTTAACAAGCGTCGCGCTGGCTTGCAA
GCTCGACCCCACCTTTCCTGCCTCAGTGCGCCAGATGATAGTGATGGGCG
GTACGACTCGTGCCAAGGGTAACGTCAGTCTGACATCGGAGTTCAACTTT
CATAAAGATGGCCTACTTTTCCTCGCGTTCAGGGAAGCCTCAAAAAGGGG
CACAGGAAGTGGCTGCCGCCCCGACACCTTCTCCTCCTCGTCGTCGTTTC
ATCATTGACTGCGACCCCGGTGTCGATGACGCAATCGCCATCCTTATGGC
AGTCAGTGAAGCAGCTCGTTTGGATGAGCAAATCCTGGCAGTGACGACGG
TTCATGGGAACGTGCCTTTAGAGCTGACTACCAAGAACGCGATGAAAGTC
CTCGACGTCTTGCCAGTCCAAACGCCACATTTCGATTCTCGCCGCATCCC
GATATTTCGTGGTTGCGCTTCGCCTCTCATTCATAGCGCTCATGAATATT
TCCCGTGGCACGGGTATCGTGGGAGACCACTGAACAGCACACCGTCGCGT
GGGAGTTCATGGAAGAACTTTTGAAACAAGCGGAGGTCTCCTGTTCCAGC
CTTGGCACCTTTTTGCGCGGCATCACGCGACCATTTCTGCGTGAGAAAGA
CCGGTGGAGAGGTGCATTGATCTGTGACGCTGTAGCCATGGCAGTTGCAA
TCGACCCAGAAGTCGTGATGAGCGTCACTGAGTGCTTTGTGGACGTTGAA
TTGCACGGGAGGTACGGGCGGGGACAGACTGTAATTGATTGGGAAGGGCA
ATTAAAAGGAAAGACAGAGGTAGGGGCTGCAAATGTCAAGATTGTTGAGA
AAATTAACATGGATCGAATGCACGAAATGCTTCTTGGCATCGTAAAAACG
GCCACAGCACTTGCCAAGGATCCATCTAACGTAAAGGAACGCGTTCAGGA
ATAAATCCGGAGGCAGCTCACATTGTGCTCTCATCTTTTCCGCAAAGCTA
CATGGCTCGATGGCCTTGGTGATGCAGGTCTTCAGGACGCTGAATCTCGT
CACGTGGAATCTGAACATGCAGCACTGGCCATGATTCGCTTGTGTAAGCA
GTACGCAGGTGAAGTGACCTTGGTATGCCTTGGTCCTTTAACAAGCGTCG
CGCTGGCTTGCAAGCTCGACCCCACCTTTCCTGCCTCAGTGCGCCAGATG
ATAGTGATGGGCGGTACGACTCGTGCCAAGGGTAACGTCAGTCTGACATC
GGAGTTCAACTTTCATAAAGATGGCCTACTTTTCCTCGCGTTCAGGGAAG
CCTCAAAAAGGGGCACAGGAAGTGGCTGCCGCCCCGACACCTTCTCCTCC
TCGTCGTCGTTTCATCATTGACTGCGACCCCGGTGTCGATGACGCAATCG
CCATCCTTATGGCAGTCAGTGAAGCAGCTCGTTTGGATGAGCAAATCCTG
GCAGTGACGACGGTTCATGGGAACGTGCCTTTAGAGCTGACTACCAAGAA
CGCGATGAAAGTCCTCGACGTCTTGCCAGTCCAAACGCCACATTTCGATT
CTCGCCGCATCCCGATATTTCGTGGTTGCGCTTCGCCTCTCATTCATAGC
GCTCATGAATATTTCCCGTGGCACGGGTATCGTGGGAGACCACTGAACAG
CACACCGTCGCGTGGGAGTTCATGGAAGAACTTTTGAAACAAGCGGAGGT
CTCCTGTTCCAGCCTTGGCACCTTTTTGCGCGGCATCACGCGACCATTTC
TGCGTGAGAAAGACCGGTGGAGAGGTGCATTGATCTGTGACGCTGTAGCC
ATGGCAGTTGCAATCGACCCAGAAGTCGTGATGAGCGTCACTGAGTGCTT
TGTGGACGTTGAATTGCACGGGAGGTACGGGCGGGGACAGACTGTAATTG
ATTGGGAAGGGCAATTAAAAGGAAAGACAGAGGTAGGGGCTGCAAATGTC
AAGATTGTTGAGAAAATTAACATGGATCGAATGCACGAAATGCTTCTTGG
CATCGTAAAAACGGCCACAGCACTTGCCAAGGATCCATCTAACGTAAAGG
AACGCGTTCAGGAATAAATCCGGAGGCAGCTCACATTGTGCTCTCATCTT
TTCCGCAAAGCTACATGGCTCGATGGCCTTGGTGATGCAGGTCTTCAGGA
CGCTGAATCTCGTCACGTGGAATCTGAACATGCAGCACTGGCCATGATTC
GCTTGTGTAAGCAGTACGCAGGTGAAGTGACCTTGGTATGCCTTGGTCCT
TTAACAAGCGTCGCGCTGGCTTGCAAGCTCGACCCCACCTTTCCTGCCTC
AGTGCGCCAGATGATAGTGATGGGCGGTACGACTCGTGCCAAGGGTAACG
TCAGTCTGACATCGGAGTTCAACTTTCATAAAGATGGCCTACTTTTCCTC
GCGTTCAGGGAAGCCTCAAAAAGGGGCACAGGAAGTGGCTGCCGCCCCGA
CACCTTCTCCTCCTCGTCGTCGTTTCATCATTGACTGCGACCCCGGTGTC
GATGACGCAATCGCCATCCTTATGGCAGTCAGTGAAGCAGCTCGTTTGGA
TGAGCAAATCCTGGCAGTGACGACGGTTCATGGGAACGTGCCTTTAGAGC
TGACTACCAAGAACGCGATGAAAGTCCTCGACGTCTTGCCAGTCCAAACG
CCACATTTCGATTCTCGCCGCATCCCGATATTTCGTGGTTGCGCTTCGCC
TCTCATTCATAGCGCTCATGAATATTTCCCGTGGCACGGGTATCGTGGGA
GACCACTGAACAGCACACCGTCGCGTGGGAGTTCATGGAAGAACTTTTGA
AACAAGCGGAGGTCTCCTGTTCCAGCCTTGGCACCTTTTTGCGCGGCATC
ACGCGACCATTTCTGCGTGAGAAAGACCGGTGGAGAGGTGCATTGATCTG
TGACGCTGTAGCCATGGCAGTTGCAATCGACCCAGAAGTCGTGATGAGCG
TCACTGAGTGCTTTGTGGACGTTGAATTGCACGGGAGGTACGGGCGGGGA
CAGACTGTAATTGATTGGGAAGGGCAATTAAAAGGAAAGACAGAGGTAGG
GGCTGCAAATGTCAAGATTGTTGAGAAAATTAACATGGATCGAATGCACG
AAATGCTTCTTGGCATCGTAAAAACGGCCACAGCACTTGCCAAGGATCCA
TCTAACGTAAAGGAACGCGTTCAGGAATAAATCCGGAGGCAGCTCACATT
GTGCTCTCATCTTTTCCGCAAAGCTACATGGCTCGATGGCCTTGGTGATG
CAGGTCTTCAGGACGCTGAATCTCGTCACGTGGAATCTGAACATGCAGCA
CTGGCCATGATTCGCTTGTGTAAGCAGTACGCAGGTGAAGTGACCTTGGT
ATGCCTTGGTCCTTTAACAAGCGTCGCGCTGGCTTGCAAGCTCGACCCCA
CCTTTCCTGCCTCAGTGCGCCAGATGATAGTGATGGGCGGTACGACTCGT
GCCAAGGGTAACGTCAGTCTGACATCGGAGTTCAACTTTCATAAAGATGG
CCTACTTTTCCTCGCGTTCAGGGAAGCCTCAAAAAGGGGCACAGGAAGTG
GCTGCCGCCCCGACACCTTCTCCTCCTCGTCGTCGTTTCATCATTGACTG
CGACCCCGGTGTCGATGACGCAATCGCCATCCTTATGGCAGTCAGTGAAG
CAGCTCGTTTGGATGAGCAAATCCTGGCAGTGACGACGGTTCATGGGAAC
GTGCCTTTAGAGCTGACTACCAAGAACGCGATGAAAGTCCTCGACGTCTT
GCCAGTCCAAACGCCACATTTCGATTCTCGCCGCATCCCGATATTTCGTG
GTTGCGCTTCGCCTCTCATTCATAGCGCTCATGAATATTTCCCGTGGCAC
GG back to top
|