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Properties
| Property Name | Value |
|---|
| Product | Pleckstrin like protein |
| Orig transcript id | gnl|cribi|Naga_100004g67.9139.mrna |
| Orig protein id | gnl|cribi|Naga_100004g67.9139 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002459.1 | supercontig | CM002459.1:375651..378950 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2433 ID=rna2433|Name=rna2433|organism=Nannochloropsis gaditana|type=mRNA|length=1981bp
TGCACAATTCGACGAAAACAAAAGAATACCAGATGGTTAGCACATAGGCG
TTCTGCCATCATGTGCCGACGAATTTACTGCCAAAAAGCCTGAGGAGGTA
TATGGGCATGTAATAAATTGGCCATAAACTTTCCAGGCCGGAGCCGTGAG
CCTCCTGACCATCCCACCAACATCCGTATCCACGACTGTCGATGTTCGTC
TTCCGAATCACTTGCTTGTTCGCTGAACTACTCATGTCGTGCACTGCTCT
TCCTCGCTTTGTTCTACTTCAACGATAGGAAAATGTCATATGCAAAATCG
TAGGAACGCATGTGGGACGCACTATGAACTTTCCACTCCTCTCTGCATTT
ATAGTAACATTTACTTACTCTATGCCTGGCTTCGCGCACTCGATTTTTTC
TAGCAACTGGGATTTTGCGTGGGGCATACATAGGAGTGTGAGGCAGTCAC
ACCCGTAACACGCACCCCGATCGCACCTGCTAGCACGTCTGGGAATGAAG
ATGCCTGACTTTTCCCTGACCTACCCACAATTCACGCCGTGGTCCGCGTT
TTGTGGCGGGAGCCTCATCGCCGCGTCCGCCCTCCTCTTTCTTGTCGTTG
CCGGCAAGCGAGTTGGCATCTCAGGCCTTATCTCGGCGGGCCTTCTCTCT
TCTCTCCGCCTCCAGCCGCTTGATCCATTGGCTACCTCCTTCCTTTCAGC
CTTTCTGGTTGCCGCACTTGCAGCCCCCTTGGTCTTTAATCCTCCCCCTC
CCCCCCTGCTCCTCCCTCCCACTGCCTACGTCCTCAGTGGCCTCCTCGTG
GGGTTCGGGACCCGCCTGGGCAACGGATGCACATCCGGTCATGGTGTCTG
CGGGCTGTCGCGTCTGTCCAAGCGAGGGGCCGTCGCTGTTATCACGTTCA
TGTCCGTAGGCGTCGCAATCGCCTCCTTCCTCGGCGCCCACCCGCACCCC
TTCTTCCGCGTGGCCCCCCCAACTCCCCCGGCGTCCTCCGATGCCCTCGA
TCTTCCCATCCCGCCCGCCTTCTGGACGCCAAGCGTCTTGCTCCTCGCCG
TCTTCCTCCTCCTCCATCGCCTCGGTCAAAAAACCTCCTTTCATCCCTGC
TTGCACCTGGCTGCCTTCTTGTCCGGCGCTCTCTTTGCGCTCGGATTGGC
TTTGAGCGGCATGTCGCAATCCCTCAAGGTCCTGGACTTCCTCTTTCTCC
GCTTCCCCGGCTGGGACCCGTCTCTTGTGGTCGTTCTTGGCGCCGCGGTG
GGTCTCCTCACGCCCTTCTCCCTCTACATTCTCTCTCACCAAGCCGTCGC
CTACGGCGACCCCTCCGTCAAGATCTACACTCCGGGAAAAGGGCCGCTAG
CTACCAGCCAATCGGAGAAGGTGGATTGGCGCCTGCTTGTGGGCGAGGCG
ATCTTTGGAGCGGGCTGGGGCATCACTGGTATCTGTCCGGGGCCCGCCCT
AGTCCTGCTTGCTCAGGGCCATCGGAAGGTGGCTCTGCTCTTCTGGCCCA
TGTACGTGGGGGGCTACCTGCTGGAGGAGGCGCTGGAGAGGGTGCTGACA
CGCCGGAAAGAGGATGCTGGTAAAAAAGAATGAGAAAGAGAGAAGTAGGT
AGCAAAAATAAAGTAGGGAAAGGGATGGCTTGAAATTTTTCTGCTTAACG
CAGGCTGAAAGACGTGTAAGTGTATGACCTCACGGGAATCGGCGCGATGT
CGATGCGTTGGTTAGATTTGTCTAGAAATGTATCAAGGACCACACATTTT
ATCTGGAAAGGAATAGGGGACATCAGAAAATGACTCAAGGTCACAAAGGG
AAGAAAGAAATTTCCAATTTGGAGAAATCGGCGCTGCTGCGCTCATAGAA
TCAGACCATCATAATTTCCATGCAATCGTCACCTTTAATCTGCTTTTCAG
TAAAGATACATATAATGATCCGTACCTTGCGTGTCTTATCTTGAGATATA
AGGGACCGGAGATTAATTAAAAATGCAAACC back to topprotein sequence of rna2433 >rna2433-protein ID=rna2433-protein|Name=rna2433|organism=Nannochloropsis gaditana|type=polypeptide|length=899bp
MERHNQAMSRIYASRSASARTDRQQGTEGTSILSPCWANDPSKLPFPIPD
EYEGGFAEVCERLEHLDSGEDWVAGLEDGVSPRGMYATCTTFGSPLQEPE
NKAYNSLSEDEQVVDFSELERLEKSIFVKAALQLLLDKIGAAGCGASNIA
NMENTSVGFGNNSGGGTPVSGRPARTSLSMAAADDALPTTLLPFSPSFPV
LKAGLLRKANHHAMGAIWNNKLVEVHKGLFVYEGDEKSPKGRRRKSLPLH
ASICTCQPATSKSTVFELALKKGAKRLWMCSNEDERNDWVHVINSAMIVL
PAQGGRGTGGSIGGAQAIDPSSPHASDMLRYRDMRLAMEVADDRDNYLHA
VAILLENGELCVPFPWIRRQIFPSQPEQATTNAISSFLPFYLKYARKRAR
QAQQHNHGGACVASPHSQSQQASGSNGGELTQLWKDMMRDKVCINGQIIH
GEYGPEAILGALARVLTTLALQAKAHEETSKSLGLEAATPSTSGSASADK
KQPDQHRLSSSVSQLALARFPSSSLGSLNEVQIVAHTMEILLACNRTQSG
GDTYYCVEYLFRNPNLAVVCPYSSHAEPLQISLELVEEDSVHRVVSPCRT
RPPPNPTEFSFGAGAQSPVPWRISGVSRPASVSSTSESCPRADSLPAIFF
QEGHQSSRSAPDSEQLPHPDATGATPHGPRAPLSAPAAGGRFPYQGHFYD
FESSTSSSLAENIRLSLVTGRYQSRHEAKNLKAEGNDLASTSEDTGTPRS
RRALRRPVILVKIQANTAYKVCPLDPQDGDDSDIWTLVSARFEQHFIVSG
VGLSKSDEFIRLKTMTVNHRPTSVEGGGEGEGEDSGHAFSQEDPSRPRSA
PRQLSENVGSQPPLTSSDKTSGLPSVTLASRQQPERQMVGKEAPPDGAT back to topmRNA from alignment at CM002459.1:375651..378950- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna2433 ID=rna2433|Name=rna2433|organism=Nannochloropsis gaditana|type=mRNA|length=3300bp|location=Sequence derived from alignment at CM002459.1:375651..378950- (Nannochloropsis gaditana)
CAGGACTTATAGGCTTCTGATTGGGTAAAAAGTGTCCGTCGCACTCGATT
CTGAGAAAGTGTCTTGAACGCTATCACCGAGATCAAAAGGGGTGTATTTG
CCTACTTTAATGCGGCGATGCAGCAGTCGGCTCCGCCTCGTGAGGTTTCA
GCCACTGCGCATCCAGTTCGGCCGACTGCAGCGTCCTCGCCTAACCTCGA
AAAGGAATGGCGGCAATGTATTGGACAAAATCATCACCTAATGCAGCTCC
AGGAGCAGCAACGCGGAAGCCCTGCCAAAATGCAAGAGGTTCGTTAGTAG
CGCAGACGCAAACCTACCACTTTTGTTCCATCCCCATTCGGATACAATAG
CCTGCTTCGTCTACCGCGTCAAACCCTCTTTGACCATTATTTTTCAAACA
GTCTCCAATATGCAGGGATCCTACGCATATCCATCAAAGACTCGTCGCCG
AGATGGAGCGACACAACCAGGCCATGTCTCGTATTTACGCGAGCCGGTCC
GCGAGCGCGAGGACTGACAGGCAGCAGGGGACTGAGGGAACAAGCATATT
GTCCCCATGTTGGGCCAATGACCCTAGCAAGTTGCCTTTTCCGATCCCGG
ACGAGTATGAGGGGGGTTTTGCAGAGGTTTGCGAGAGGCTGGAGCACCTA
GACTCGGGGGAGGACTGGGTAGCCGGGCTAGAGGATGGGGTGTCCCCCCG
AGGCATGTATGCGACTTGTACTACATTCGGATCCCCACTTCAGGAGCCGG
AGAATAAGGCGTACAACAGCTTATCCGAGGACGAGCAAGTGGTGGACTTC
TCCGAATTGGAGCGCCTAGAAAAATCCATTTTTGTAAAGGCGGCCTTACA
GCTTCTTCTGGACAAAATCGGCGCGGCCGGTTGCGGAGCCAGCAATATAG
CCAATATGGAGAACACTAGCGTGGGGTTCGGGAATAATTCCGGTGGTGGT
ACGCCGGTATCGGGCAGGCCGGCGCGGACTTCCTTGTCGATGGCAGCTGC
TGATGACGCCCTGCCGACCACTCTGCTGCCCTTCTCCCCGTCATTTCCGG
TGCTCAAAGCAGGGCTCTTACGCAAAGCCAACCATCATGCTATGGGCGCG
ATCTGGAACAATAAGCTAGTGGAGGTGCATAAGGGACTTTTCGTCTACGA
GGGCGATGAGAAAAGTCCCAAGGGTCGGCGCAGGAAATCACTGCCCCTCC
ACGCCTCGATCTGTACCTGCCAACCCGCCACCTCCAAGAGCACAGTTTTT
GAGCTCGCTCTTAAGAAAGGGGCAAAGAGGCTATGGATGTGCTCGAATGA
GGACGAACGAAACGACTGGGTGCACGTCATCAACAGCGCCATGATAGTGC
TCCCGGCCCAGGGAGGAAGAGGCACCGGCGGGTCAATCGGAGGGGCACAA
GCCATCGATCCAAGCTCTCCGCATGCCTCGGACATGCTGCGCTACAGGGA
TATGCGGTTGGCGATGGAAGTGGCGGACGATCGGGACAACTACCTGCATG
CAGTCGCGATCCTTCTTGAGAATGGAGAGCTCTGTGTTCCTTTCCCGTGG
ATTCGGAGGCAAATCTTCCCCTCCCAACCCGAGCAGGCCACAACGAATGC
AATATCTTCCTTCCTTCCATTTTATTTAAAATACGCCCGAAAAAGGGCGC
GTCAAGCCCAACAACACAACCACGGCGGAGCGTGTGTTGCGAGTCCTCAC
TCTCAGTCGCAGCAAGCCTCGGGTAGTAATGGGGGCGAGCTGACGCAGCT
GTGGAAGGACATGATGCGGGACAAAGTTTGCATCAATGGGCAGATTATTC
ACGGAGAATACGGGCCGGAGGCAATCCTTGGAGCCCTGGCTCGGGTGTTG
ACGACTCTCGCCCTGCAAGCCAAGGCGCACGAGGAGACATCCAAGTCCCT
CGGTTTAGAGGCCGCCACGCCGTCGACCTCGGGCAGCGCCAGCGCCGACA
AAAAGCAGCCCGACCAACATCGCCTATCTTCGTCGGTCTCGCAGCTGGCG
CTGGCTCGATTTCCTTCCTCGTCCCTCGGGTCACTCAACGAGGTACAGAT
CGTAGCGCACACCATGGAGATCCTCCTGGCCTGCAACCGGACACAAAGTG
GAGGTGACACATACTACTGCGTCGAGTATCTTTTCCGTAATCCCAATCTA
GCGGTAGTTTGTCCGTACTCCTCGCACGCGGAGCCTTTGCAGATCTCCCT
CGAGCTGGTGGAGGAGGACAGTGTGCACCGCGTCGTCTCGCCCTGCCGGA
CGAGGCCGCCGCCAAACCCGACGGAGTTCAGCTTCGGTGCTGGCGCCCAA
TCCCCTGTCCCCTGGAGGATTAGCGGGGTGTCGAGACCCGCTTCCGTTTC
CTCCACTTCAGAGTCTTGCCCGCGGGCGGACTCGTTGCCGGCCATTTTTT
TCCAAGAGGGACACCAGTCCTCACGATCTGCCCCAGACAGCGAGCAATTG
CCGCATCCAGACGCCACAGGTGCCACCCCTCACGGTCCCCGCGCACCATT
GTCGGCTCCAGCGGCGGGCGGTCGATTTCCATACCAGGGACATTTCTACG
ACTTCGAATCATCGACAAGTTCCTCGCTTGCCGAAAACATAAGGCTTTCG
TTGGTCACGGGCCGTTACCAGTCGAGGCATGAGGCCAAGAATCTCAAGGC
CGAGGGCAACGACCTTGCATCGACAAGCGAGGACACAGGAACGCCACGAA
GCAGACGCGCCCTAAGGCGTCCTGTCATCCTTGTGAAGATACAGGCGAAC
ACCGCCTACAAGGTCTGCCCTCTGGATCCACAGGATGGAGACGACAGCGA
CATCTGGACTTTGGTGTCCGCACGTTTCGAGCAACATTTTATCGTCTCTG
GAGTAGGATTGTCGAAAAGTGACGAGTTTATCCGTCTCAAAACCATGACT
GTGAATCACCGCCCCACATCAGTGGAGGGAGGGGGAGAGGGAGAAGGAGA
GGACTCTGGGCATGCGTTTTCCCAAGAAGACCCATCACGGCCCCGATCGG
CACCCAGGCAGCTTTCTGAAAATGTGGGGTCACAGCCGCCGTTGACGTCT
AGCGACAAGACGTCGGGGCTGCCATCCGTCACGCTTGCAAGCAGGCAGCA
GCCAGAGCGGCAGATGGTAGGCAAGGAAGCGCCACCAGACGGCGCGACGT
AGCAAAATTTGTGTGGTTTGCATTTTTAATTAATCTCCGGTCCCTTATAT
CTCAAGATAAGACACGCAAGGTACGGATCATTATATGTATCTTTACTGAA
AAGCAGATTAAAGGTGACGATTGCATGGAAATTATGATGGTCTGATTCTA
back to topCoding sequence (CDS) from alignment at CM002459.1:375651..378950- >rna2433 ID=rna2433|Name=rna2433|organism=Nannochloropsis gaditana|type=CDS|length=2700bp|location=Sequence derived from alignment at CM002459.1:375651..378950- (Nannochloropsis gaditana)
ATGGAGCGACACAACCAGGCCATGTCTCGTATTTACGCGAGCCGGTCCGC
GAGCGCGAGGACTGACAGGCAGCAGGGGACTGAGGGAACAAGCATATTGT
CCCCATGTTGGGCCAATGACCCTAGCAAGTTGCCTTTTCCGATCCCGGAC
GAGTATGAGGGGGGTTTTGCAGAGGTTTGCGAGAGGCTGGAGCACCTAGA
CTCGGGGGAGGACTGGGTAGCCGGGCTAGAGGATGGGGTGTCCCCCCGAG
GCATGTATGCGACTTGTACTACATTCGGATCCCCACTTCAGGAGCCGGAG
AATAAGGCGTACAACAGCTTATCCGAGGACGAGCAAGTGGTGGACTTCTC
CGAATTGGAGCGCCTAGAAAAATCCATTTTTGTAAAGGCGGCCTTACAGC
TTCTTCTGGACAAAATCGGCGCGGCCGGTTGCGGAGCCAGCAATATAGCC
AATATGGAGAACACTAGCGTGGGGTTCGGGAATAATTCCGGTGGTGGTAC
GCCGGTATCGGGCAGGCCGGCGCGGACTTCCTTGTCGATGGCAGCTGCTG
ATGACGCCCTGCCGACCACTCTGCTGCCCTTCTCCCCGTCATTTCCGGTG
CTCAAAGCAGGGCTCTTACGCAAAGCCAACCATCATGCTATGGGCGCGAT
CTGGAACAATAAGCTAGTGGAGGTGCATAAGGGACTTTTCGTCTACGAGG
GCGATGAGAAAAGTCCCAAGGGTCGGCGCAGGAAATCACTGCCCCTCCAC
GCCTCGATCTGTACCTGCCAACCCGCCACCTCCAAGAGCACAGTTTTTGA
GCTCGCTCTTAAGAAAGGGGCAAAGAGGCTATGGATGTGCTCGAATGAGG
ACGAACGAAACGACTGGGTGCACGTCATCAACAGCGCCATGATAGTGCTC
CCGGCCCAGGGAGGAAGAGGCACCGGCGGGTCAATCGGAGGGGCACAAGC
CATCGATCCAAGCTCTCCGCATGCCTCGGACATGCTGCGCTACAGGGATA
TGCGGTTGGCGATGGAAGTGGCGGACGATCGGGACAACTACCTGCATGCA
GTCGCGATCCTTCTTGAGAATGGAGAGCTCTGTGTTCCTTTCCCGTGGAT
TCGGAGGCAAATCTTCCCCTCCCAACCCGAGCAGGCCACAACGAATGCAA
TATCTTCCTTCCTTCCATTTTATTTAAAATACGCCCGAAAAAGGGCGCGT
CAAGCCCAACAACACAACCACGGCGGAGCGTGTGTTGCGAGTCCTCACTC
TCAGTCGCAGCAAGCCTCGGGTAGTAATGGGGGCGAGCTGACGCAGCTGT
GGAAGGACATGATGCGGGACAAAGTTTGCATCAATGGGCAGATTATTCAC
GGAGAATACGGGCCGGAGGCAATCCTTGGAGCCCTGGCTCGGGTGTTGAC
GACTCTCGCCCTGCAAGCCAAGGCGCACGAGGAGACATCCAAGTCCCTCG
GTTTAGAGGCCGCCACGCCGTCGACCTCGGGCAGCGCCAGCGCCGACAAA
AAGCAGCCCGACCAACATCGCCTATCTTCGTCGGTCTCGCAGCTGGCGCT
GGCTCGATTTCCTTCCTCGTCCCTCGGGTCACTCAACGAGGTACAGATCG
TAGCGCACACCATGGAGATCCTCCTGGCCTGCAACCGGACACAAAGTGGA
GGTGACACATACTACTGCGTCGAGTATCTTTTCCGTAATCCCAATCTAGC
GGTAGTTTGTCCGTACTCCTCGCACGCGGAGCCTTTGCAGATCTCCCTCG
AGCTGGTGGAGGAGGACAGTGTGCACCGCGTCGTCTCGCCCTGCCGGACG
AGGCCGCCGCCAAACCCGACGGAGTTCAGCTTCGGTGCTGGCGCCCAATC
CCCTGTCCCCTGGAGGATTAGCGGGGTGTCGAGACCCGCTTCCGTTTCCT
CCACTTCAGAGTCTTGCCCGCGGGCGGACTCGTTGCCGGCCATTTTTTTC
CAAGAGGGACACCAGTCCTCACGATCTGCCCCAGACAGCGAGCAATTGCC
GCATCCAGACGCCACAGGTGCCACCCCTCACGGTCCCCGCGCACCATTGT
CGGCTCCAGCGGCGGGCGGTCGATTTCCATACCAGGGACATTTCTACGAC
TTCGAATCATCGACAAGTTCCTCGCTTGCCGAAAACATAAGGCTTTCGTT
GGTCACGGGCCGTTACCAGTCGAGGCATGAGGCCAAGAATCTCAAGGCCG
AGGGCAACGACCTTGCATCGACAAGCGAGGACACAGGAACGCCACGAAGC
AGACGCGCCCTAAGGCGTCCTGTCATCCTTGTGAAGATACAGGCGAACAC
CGCCTACAAGGTCTGCCCTCTGGATCCACAGGATGGAGACGACAGCGACA
TCTGGACTTTGGTGTCCGCACGTTTCGAGCAACATTTTATCGTCTCTGGA
GTAGGATTGTCGAAAAGTGACGAGTTTATCCGTCTCAAAACCATGACTGT
GAATCACCGCCCCACATCAGTGGAGGGAGGGGGAGAGGGAGAAGGAGAGG
ACTCTGGGCATGCGTTTTCCCAAGAAGACCCATCACGGCCCCGATCGGCA
CCCAGGCAGCTTTCTGAAAATGTGGGGTCACAGCCGCCGTTGACGTCTAG
CGACAAGACGTCGGGGCTGCCATCCGTCACGCTTGCAAGCAGGCAGCAGC
CAGAGCGGCAGATGGTAGGCAAGGAAGCGCCACCAGACGGCGCGACGTAG back to top
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