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Properties
| Property Name | Value |
|---|
| Product | heat shock protein |
| Orig transcript id | gnl|cribi|Naga_100004g32.9082.mrna |
| Orig protein id | gnl|cribi|Naga_100004g32.9082 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002459.1 | supercontig | CM002459.1:292562..294691 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2399 ID=rna2399|Name=rna2399|organism=Nannochloropsis gaditana|type=mRNA|length=651bp
ATGGCCCCGCAACAATTTACGCTGGAAGAGGTGGCTGGGCACAACTCGGA
GAAAGACATCTGGCTCATCATCGGGAACGAGAAAACAGGCGGCCCGAAGG
TATATGATGTAACAAAGTACTTGGAGGAGCACCCCGGAGGCTCAGAGGTC
CTTCTGGACCACGCAGGAAAGTACGCAGACGAAATGTTTGAGGACATCGG
TCATTCAGGGGATGCGAAGGAGAAGCTCAAGACGCTCATGGTGGGCGAGC
TGACGCCCGAAGACGTAGAGAAGCTCGCAAGTGAGAAGGTGTCACGGGCT
TCGGAGCTTCCATCAAAGGGGGGGCTGAATCCTTTTGCTGTGGTAGTGCT
ACTAGTGGCCATCGTCCTGGGCCTGTATTTGTCAAAGCAGCGCACTGAAG
AGCTTGGGTCGTACAATCGAAGAGACTTGCAAATGCTGCTTTGGGCTGAG
AGGGGAGGTGATCAGAACCGTGCGTGTTTTCATGGCATGTGTCAGGAGCG
GGATGAACACTGTGTCGCTAAAGCCACGGGGACCCGGCCATGGAGGAACA
TGACAGGCACGGAGAGGGTACAGCGTCGGGGAGCAGGTGCGGTAGACATG
GGGGACTATGGGCGGGCATCGAGGTCACGATGGTTAACACAAATTCTGTG
A back to topprotein sequence of rna2399 >rna2399-protein ID=rna2399-protein|Name=rna2399|organism=Nannochloropsis gaditana|type=polypeptide|length=547bp
MSFMFRCCCRPFLKGGDDGSRPYYDQLGVHRECSTEDIKRAYKKKSLELH
PDKLAQRGQVLTVEDQSRFQRVKEAYEVLVDPKRRDMYDEFGETGLKLIE
DPQSMDPQTAFSNFMRSSSYDRCAIFSTLVGVTAFVLLWPVLLCLQADKT
IHIPWTAIWTPLWVCDAFLLFILWFMVFLGRRSPAEGLEEEWRDDLPARV
LNAVQLSCNVLFQVFLTLKLDKVVPWDWSRIFAPWLAWEGIQLFRNLTVT
STGGGPTPFATSAEEGVLLRAMAVRQAMLGLQHGVLRIVFCALAILRLDE
KIRVTWWVVFTPLWLFFATQFVGICVEYALAKRLQEGLIAAATATAAERG
GSVMDPETGEVELGPEEAMIQEQTELMASRASMLACQAAIVLVMALLGVA
RIEGAHFSVFLVFLPVFVIVGCFTCSLGCAVCCVRDADGIMDGENRPLNP
GAGGQGTASATSIGTNPSVAASMVRDSGEGHVEAGSGGSQQDLPEGRSSS
HKTGSKVRKEGGTPYRPPAPLPSSSQEGPKTASGNDSQGWGGGQERR back to topmRNA from alignment at CM002459.1:292562..294691- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2399 ID=rna2399|Name=rna2399|organism=Nannochloropsis gaditana|type=mRNA|length=2130bp|location=Sequence derived from alignment at CM002459.1:292562..294691- (Nannochloropsis gaditana)
ATGTCGTTCATGTTCCGGTGCTGTTGCCGCCCATTCTTGAAAGGTGGAGA
TGACGGAAGCAGGCCTTACTACGATCAGCTGGGTGTGCACAGGGTACGTG
AGGATTTGTGGAATTTCCGAATGCCACGAACTTCTTGATTCAAGCGTTTC
TCGGGGAAAGTGAGCGTGTGTACCATGTGGATCTTTCAATTTCATAGCAT
GGAAGTATCTTTTTAAGATTGCTTCTTTTACCAAGCATACACGTATCACG
GCTGATGACTGTCTGCCGAGAAGAGCTCGCATGATTCCAAATCCTTCGCA
TTCCCTTCCTGTACTTCGTTATACAGGAATGTTCCACAGAAGATATCAAA
CGCGCCTACAAGAAAAAAAGCCTCGAGCTTCATCCTGACAAACTAGCGCA
GCGTGGCCAGGTCCTAACAGTGGAAGACCAATCGCGTTTCCAGCGTGTGA
AGGAAGCGTACGAGGTGCTCGTAGACCCGAAACGACGCGATATGTACGAT
GAATTTGGAGAGACAGGCTTAAAGCTCATCGAAGACCCTCAATCGATGGA
CCCTCAGACGGCTTTCAGCAACTTTATGCGTTCGTCTTCCTACGACCGGT
GCGCCATTTTCTCAACCCTCGTGGGTGTGACGGCCTTCGTTCTTCTGTGG
CCCGTATTGCTGTGCTTACAGGTACGATGAAGTGCCCTGTCCGTTGCCCC
TTGGAAACCACCGACCTCGGTTTTCGTTGGCGGAGCATGCCTTCGCTCCT
TTCTCGGCGGTTCAGACGTACATGTACGGCCTCCGCAACCCCTTGGCCGG
GTGCCCTGTTTCCTTTTCTCCTTCAGTCTTCTTCCCGCACAAATCTGTTT
TTTCTCCGGACGTACTCTGTCTTTTGCCGTCCACGCTCAATTCTGACTTC
CGCCCTCTCTCTCCCTTCCCCCAGGCAGACAAGACGATCCATATTCCTTG
GACCGCCATCTGGACGCCGCTCTGGGTCTGTGATGCTTTCCTCCTATTCA
TCCTCTGGTTCATGGTGTTCCTGGGCCGCAGGTCGCCTGCCGAGGGCCTG
GAGGAGGAGTGGCGCGACGACCTACCCGCCCGCGTCCTGAATGCGGTCCA
GCTCTCTTGCAACGTTTTGTTCCAAGTCTTCTTGACGCTCAAGCTCGACA
AAGTGGTGCCCTGGGACTGGAGTCGGATTTTTGCGCCCTGGCTGGCGTGG
GAAGGGATTCAACTCTTCCGGAACTTGACCGTGACTTCCACAGGCGGGGG
CCCGACCCCCTTCGCCACCTCGGCGGAGGAAGGGGTGCTCCTGAGGGCCA
TGGCTGTGCGGCAGGCGATGCTCGGCCTTCAGCACGGGGTCTTACGCATC
GTGTTCTGTGCCCTGGCTATACTGAGACTGGACGAGAAGATCCGGGTGAC
TTGGTGGGTGGTCTTTACCCCCCTCTGGCTCTTCTTCGCCACGCAATTCG
TGGGCATCTGCGTGGAGTACGCGCTGGCCAAACGCTTGCAGGAGGGTTTG
ATTGCAGCGGCAACTGCCACGGCGGCAGAGAGGGGCGGGAGTGTGATGGA
CCCGGAGACTGGTGAAGTTGAATTGGGGCCCGAAGAGGCCATGATACAGG
AGCAGACGGAGCTGATGGCAAGCCGAGCCTCCATGCTGGCTTGTCAGGCC
GCGATCGTCTTGGTGATGGCCTTGTTGGGGGTGGCGAGGATCGAGGGTGC
GCACTTTTCAGTATTTTTGGTCTTCCTACCCGTCTTCGTCATCGTCGGCT
GCTTCACGTGCAGTCTGGGCTGCGCAGTCTGCTGCGTCCGGGACGCGGAC
GGCATCATGGACGGGGAAAACCGACCCTTGAACCCGGGAGCCGGAGGCCA
GGGCACGGCGAGCGCCACAAGCATTGGTACTAACCCGTCCGTGGCTGCGT
CCATGGTCCGGGACAGTGGAGAGGGCCACGTGGAAGCTGGGAGTGGAGGA
TCCCAACAGGACCTTCCTGAAGGCAGGAGCTCCTCACATAAGACCGGGTC
CAAGGTCCGGAAGGAGGGCGGAACACCCTATCGTCCACCCGCTCCACTAC
CCTCATCCTCACAAGAAGGGCCGAAAACAGCTTCAGGAAATGACAGCCAG
GGGTGGGGGGGGGGGCAGGAGAGGAGATAA back to topCoding sequence (CDS) from alignment at CM002459.1:292562..294691- >rna2399 ID=rna2399|Name=rna2399|organism=Nannochloropsis gaditana|type=CDS|length=4932bp|location=Sequence derived from alignment at CM002459.1:292562..294691- (Nannochloropsis gaditana)
GCAGACAAGACGATCCATATTCCTTGGACCGCCATCTGGACGCCGCTCTG
GGTCTGTGATGCTTTCCTCCTATTCATCCTCTGGTTCATGGTGTTCCTGG
GCCGCAGGTCGCCTGCCGAGGGCCTGGAGGAGGAGTGGCGCGACGACCTA
CCCGCCCGCGTCCTGAATGCGGTCCAGCTCTCTTGCAACGTTTTGTTCCA
AGTCTTCTTGACGCTCAAGCTCGACAAAGTGGTGCCCTGGGACTGGAGTC
GGATTTTTGCGCCCTGGCTGGCGTGGGAAGGGATTCAACTCTTCCGGAAC
TTGACCGTGACTTCCACAGGCGGGGGCCCGACCCCCTTCGCCACCTCGGC
GGAGGAAGGGGTGCTCCTGAGGGCCATGGCTGTGCGGCAGGCGATGCTCG
GCCTTCAGCACGGGGTCTTACGCATCGTGTTCTGTGCCCTGGCTATACTG
AGACTGGACGAGAAGATCCGGGTGACTTGGTGGGTGGTCTTTACCCCCCT
CTGGCTCTTCTTCGCCACGCAATTCGTGGGCATCTGCGTGGAGTACGCGC
TGGCCAAACGCTTGCAGGAGGGTTTGATTGCAGCGGCAACTGCCACGGCG
GCAGAGAGGGGCGGGAGTGTGATGGACCCGGAGACTGGTGAAGTTGAATT
GGGGCCCGAAGAGGCCATGATACAGGAGCAGACGGAGCTGATGGCAAGCC
GAGCCTCCATGCTGGCTTGTCAGGCCGCGATCGTCTTGGTGATGGCCTTG
TTGGGGGTGGCGAGGATCGAGGGTGCGCACTTTTCAGTATTTTTGGTCTT
CCTACCCGTCTTCGTCATCGTCGGCTGCTTCACGTGCAGTCTGGGCTGCG
CAGTCTGCTGCGTCCGGGACGCGGACGGCATCATGGACGGGGAAAACCGA
CCCTTGAACCCGGGAGCCGGAGGCCAGGGCACGGCGAGCGCCACAAGCAT
TGGTACTAACCCGTCCGTGGCTGCGTCCATGGTCCGGGACAGTGGAGAGG
GCCACGTGGAAGCTGGGAGTGGAGGATCCCAACAGGACCTTCCTGAAGGC
AGGAGCTCCTCACATAAGACCGGGTCCAAGGTCCGGAAGGAGGGCGGAAC
ACCCTATCGTCCACCCGCTCCACTACCCTCATCCTCACAAGAAGGGCCGA
AAACAGCTTCAGGAAATGACAGCCAGGGGTGGGGGGGGGGGCAGGAGAGG
AGATAAGAATGTTCCACAGAAGATATCAAACGCGCCTACAAGAAAAAAAG
CCTCGAGCTTCATCCTGACAAACTAGCGCAGCGTGGCCAGGTCCTAACAG
TGGAAGACCAATCGCGTTTCCAGCGTGTGAAGGAAGCGTACGAGGTGCTC
GTAGACCCGAAACGACGCGATATGTACGATGAATTTGGAGAGACAGGCTT
AAAGCTCATCGAAGACCCTCAATCGATGGACCCTCAGACGGCTTTCAGCA
ACTTTATGCGTTCGTCTTCCTACGACCGGTGCGCCATTTTCTCAACCCTC
GTGGGTGTGACGGCCTTCGTTCTTCTGTGGCCCGTATTGCTGTGCTTACA
GATGTCGTTCATGTTCCGGTGCTGTTGCCGCCCATTCTTGAAAGGTGGAG
ATGACGGAAGCAGGCCTTACTACGATCAGCTGGGTGTGCACAGGGCAGAC
AAGACGATCCATATTCCTTGGACCGCCATCTGGACGCCGCTCTGGGTCTG
TGATGCTTTCCTCCTATTCATCCTCTGGTTCATGGTGTTCCTGGGCCGCA
GGTCGCCTGCCGAGGGCCTGGAGGAGGAGTGGCGCGACGACCTACCCGCC
CGCGTCCTGAATGCGGTCCAGCTCTCTTGCAACGTTTTGTTCCAAGTCTT
CTTGACGCTCAAGCTCGACAAAGTGGTGCCCTGGGACTGGAGTCGGATTT
TTGCGCCCTGGCTGGCGTGGGAAGGGATTCAACTCTTCCGGAACTTGACC
GTGACTTCCACAGGCGGGGGCCCGACCCCCTTCGCCACCTCGGCGGAGGA
AGGGGTGCTCCTGAGGGCCATGGCTGTGCGGCAGGCGATGCTCGGCCTTC
AGCACGGGGTCTTACGCATCGTGTTCTGTGCCCTGGCTATACTGAGACTG
GACGAGAAGATCCGGGTGACTTGGTGGGTGGTCTTTACCCCCCTCTGGCT
CTTCTTCGCCACGCAATTCGTGGGCATCTGCGTGGAGTACGCGCTGGCCA
AACGCTTGCAGGAGGGTTTGATTGCAGCGGCAACTGCCACGGCGGCAGAG
AGGGGCGGGAGTGTGATGGACCCGGAGACTGGTGAAGTTGAATTGGGGCC
CGAAGAGGCCATGATACAGGAGCAGACGGAGCTGATGGCAAGCCGAGCCT
CCATGCTGGCTTGTCAGGCCGCGATCGTCTTGGTGATGGCCTTGTTGGGG
GTGGCGAGGATCGAGGGTGCGCACTTTTCAGTATTTTTGGTCTTCCTACC
CGTCTTCGTCATCGTCGGCTGCTTCACGTGCAGTCTGGGCTGCGCAGTCT
GCTGCGTCCGGGACGCGGACGGCATCATGGACGGGGAAAACCGACCCTTG
AACCCGGGAGCCGGAGGCCAGGGCACGGCGAGCGCCACAAGCATTGGTAC
TAACCCGTCCGTGGCTGCGTCCATGGTCCGGGACAGTGGAGAGGGCCACG
TGGAAGCTGGGAGTGGAGGATCCCAACAGGACCTTCCTGAAGGCAGGAGC
TCCTCACATAAGACCGGGTCCAAGGTCCGGAAGGAGGGCGGAACACCCTA
TCGTCCACCCGCTCCACTACCCTCATCCTCACAAGAAGGGCCGAAAACAG
CTTCAGGAAATGACAGCCAGGGGTGGGGGGGGGGGCAGGAGAGGAGATAA
GAATGTTCCACAGAAGATATCAAACGCGCCTACAAGAAAAAAAGCCTCGA
GCTTCATCCTGACAAACTAGCGCAGCGTGGCCAGGTCCTAACAGTGGAAG
ACCAATCGCGTTTCCAGCGTGTGAAGGAAGCGTACGAGGTGCTCGTAGAC
CCGAAACGACGCGATATGTACGATGAATTTGGAGAGACAGGCTTAAAGCT
CATCGAAGACCCTCAATCGATGGACCCTCAGACGGCTTTCAGCAACTTTA
TGCGTTCGTCTTCCTACGACCGGTGCGCCATTTTCTCAACCCTCGTGGGT
GTGACGGCCTTCGTTCTTCTGTGGCCCGTATTGCTGTGCTTACAGATGTC
GTTCATGTTCCGGTGCTGTTGCCGCCCATTCTTGAAAGGTGGAGATGACG
GAAGCAGGCCTTACTACGATCAGCTGGGTGTGCACAGGGCAGACAAGACG
ATCCATATTCCTTGGACCGCCATCTGGACGCCGCTCTGGGTCTGTGATGC
TTTCCTCCTATTCATCCTCTGGTTCATGGTGTTCCTGGGCCGCAGGTCGC
CTGCCGAGGGCCTGGAGGAGGAGTGGCGCGACGACCTACCCGCCCGCGTC
CTGAATGCGGTCCAGCTCTCTTGCAACGTTTTGTTCCAAGTCTTCTTGAC
GCTCAAGCTCGACAAAGTGGTGCCCTGGGACTGGAGTCGGATTTTTGCGC
CCTGGCTGGCGTGGGAAGGGATTCAACTCTTCCGGAACTTGACCGTGACT
TCCACAGGCGGGGGCCCGACCCCCTTCGCCACCTCGGCGGAGGAAGGGGT
GCTCCTGAGGGCCATGGCTGTGCGGCAGGCGATGCTCGGCCTTCAGCACG
GGGTCTTACGCATCGTGTTCTGTGCCCTGGCTATACTGAGACTGGACGAG
AAGATCCGGGTGACTTGGTGGGTGGTCTTTACCCCCCTCTGGCTCTTCTT
CGCCACGCAATTCGTGGGCATCTGCGTGGAGTACGCGCTGGCCAAACGCT
TGCAGGAGGGTTTGATTGCAGCGGCAACTGCCACGGCGGCAGAGAGGGGC
GGGAGTGTGATGGACCCGGAGACTGGTGAAGTTGAATTGGGGCCCGAAGA
GGCCATGATACAGGAGCAGACGGAGCTGATGGCAAGCCGAGCCTCCATGC
TGGCTTGTCAGGCCGCGATCGTCTTGGTGATGGCCTTGTTGGGGGTGGCG
AGGATCGAGGGTGCGCACTTTTCAGTATTTTTGGTCTTCCTACCCGTCTT
CGTCATCGTCGGCTGCTTCACGTGCAGTCTGGGCTGCGCAGTCTGCTGCG
TCCGGGACGCGGACGGCATCATGGACGGGGAAAACCGACCCTTGAACCCG
GGAGCCGGAGGCCAGGGCACGGCGAGCGCCACAAGCATTGGTACTAACCC
GTCCGTGGCTGCGTCCATGGTCCGGGACAGTGGAGAGGGCCACGTGGAAG
CTGGGAGTGGAGGATCCCAACAGGACCTTCCTGAAGGCAGGAGCTCCTCA
CATAAGACCGGGTCCAAGGTCCGGAAGGAGGGCGGAACACCCTATCGTCC
ACCCGCTCCACTACCCTCATCCTCACAAGAAGGGCCGAAAACAGCTTCAG
GAAATGACAGCCAGGGGTGGGGGGGGGGGCAGGAGAGGAGATAAGAATGT
TCCACAGAAGATATCAAACGCGCCTACAAGAAAAAAAGCCTCGAGCTTCA
TCCTGACAAACTAGCGCAGCGTGGCCAGGTCCTAACAGTGGAAGACCAAT
CGCGTTTCCAGCGTGTGAAGGAAGCGTACGAGGTGCTCGTAGACCCGAAA
CGACGCGATATGTACGATGAATTTGGAGAGACAGGCTTAAAGCTCATCGA
AGACCCTCAATCGATGGACCCTCAGACGGCTTTCAGCAACTTTATGCGTT
CGTCTTCCTACGACCGGTGCGCCATTTTCTCAACCCTCGTGGGTGTGACG
GCCTTCGTTCTTCTGTGGCCCGTATTGCTGTGCTTACAGATGTCGTTCAT
GTTCCGGTGCTGTTGCCGCCCATTCTTGAAAGGTGGAGATGACGGAAGCA
GGCCTTACTACGATCAGCTGGGTGTGCACAGG back to top
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