rna237, rna237 (mRNA) Nannochloropsis gaditana

Overview
Namerna237
Unique Namerna237
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length521
Alignment locationCM002455.1:596295..596836 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100100g1.8904.mrna
Orig protein idgnl|cribi|Naga_100100g1.8904
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:596295..596836 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100100g1gene226Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM30436.1cds237Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna237rna237-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna237 ID=rna237|Name=rna237|organism=Nannochloropsis gaditana|type=mRNA|length=521bp
CCACCCTGGACGACGAGACTTTTGGTCGCTTTTGGAATCTGCAGCATCTC
GGATGTCGAAGAAGCCACTCGGGACCTGACTTAGGCACTTTGATGCGTAT
GTAGTGTGCCGGGTTGAGACAGGATTTCCGGGTCTACTCACTCCTTCTCC
CTCCTCTCCTCTCTCCCCCTTAGACAAGCATGACGCTGGGGACAGGCCTC
GTCGGCGCTTCCTTTGGCATCTTTGTGAAGCTGGCCAGCAACAGCATGCG
CAAAATACCACTTCGACGAGAGCCTTGGGATTATCCCATCTTCATGCTTG
TGGGGGCCTGGGTTGGTTACAAGTACGTGGCGCTGGAAGAAAGTCTGAGG
GAGCGGGTGAACGAGAAGCGCGCCATTTTAGACAAGGAACCGGTGCACCT
GGGCGGCGTTCTGACAACGATAAAGGAGGCAGCCGAGTGAAATCCTGTCA
CACTGCCTGCCCTTGGCGACCGCATTGAGGCCTTCAAACGAAGAAAGTGT
CTTGGCTATCTTGGAGTTTTG
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protein sequence of rna237

>rna237-protein ID=rna237-protein|Name=rna237|organism=Nannochloropsis gaditana|type=polypeptide|length=118bp
DLLWEGWESRSCLGRCTSDRYELYVPRRGLGDASPRFPSVRPVAAKVSTA
PPHATECCFPLLPPLSISLLLPCHIPPHTLSSVPSEDCILMHDPPPSQNT
RRVSARLGLVPGTPSFYL
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mRNA from alignment at CM002455.1:596295..596836-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna237 ID=rna237|Name=rna237|organism=Nannochloropsis gaditana|type=mRNA|length=542bp|location=Sequence derived from alignment at CM002455.1:596295..596836- (Nannochloropsis gaditana)
GACCTTCTATGGGAGGGATGGGAGAGCAGAAGTTGTCTCGGGCGATGCAC
ATCAGATAGGTATGAGTTGTACGTGCCACGCCGCGGATTGGGAGACGCAT
CACCCCGCTTCCCATCCGTCCGACCGGTTGCTGCCAAGGTAAGCACAGCG
CCACCTCACGCCACAGAGTGTTGTTTCCCCCTCCTTCCTCCTCTCTCGAT
CTCTCTGCTCCTTCCTTGCCATATCCCCCCCCATACTCTCTCCTCTGTCC
CGAGCGAGGACTGCATTTTGATGCACGATCCCCCCCCCTCCCAAAACACA
CGTCGTGTGAGTGCCCGGTTGGGCCTCGTGCCCGGCACACCATCCTTTTA
CCTCTGAGAGATTCAAGCTGCGCCTAAGCTGTCTGCTCTTCGTTAAGGTC
CTTTTCGGGGCTATTGCTTTTGCTTTCATTTTGACTGGCTGTTCTTTCGA
GAGGGGTGCCTCACTTAAGAGAGCCGAGATAAGGCGACGAATCCGTGTCG
AGAGCACTCAAGATACCATCAAGCCTTCAGGCAGGAAAAGGA
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Coding sequence (CDS) from alignment at CM002455.1:596295..596836-

>rna237 ID=rna237|Name=rna237|organism=Nannochloropsis gaditana|type=CDS|length=357bp|location=Sequence derived from alignment at CM002455.1:596295..596836- (Nannochloropsis gaditana)
GACCTTCTATGGGAGGGATGGGAGAGCAGAAGTTGTCTCGGGCGATGCAC
ATCAGATAGGTATGAGTTGTACGTGCCACGCCGCGGATTGGGAGACGCAT
CACCCCGCTTCCCATCCGTCCGACCGGTTGCTGCCAAGGTAAGCACAGCG
CCACCTCACGCCACAGAGTGTTGTTTCCCCCTCCTTCCTCCTCTCTCGAT
CTCTCTGCTCCTTCCTTGCCATATCCCCCCCCATACTCTCTCCTCTGTCC
CGAGCGAGGACTGCATTTTGATGCACGATCCCCCCCCCTCCCAAAACACA
CGTCGTGTGAGTGCCCGGTTGGGCCTCGTGCCCGGCACACCATCCTTTTA
CCTCTGA
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Synonyms
Publications