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Properties
| Property Name | Value |
|---|
| Product | hd phosphohydrolase family protein |
| Orig transcript id | gnl|cribi|Naga_100348g2.2073.mrna |
| Orig protein id | gnl|cribi|Naga_100348g2.2073 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002459.1 | supercontig | CM002459.1:210577..211938 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2367 ID=rna2367|Name=rna2367|organism=Nannochloropsis gaditana|type=mRNA|length=2736bp
ATGGCAGGGGCGTGTGCGTGTCTGGTGTTTTTCGAGACTTTTGGACATGT
CCCCCAAAGTCTTGAGGACTTGTTGGAGCCTGTTCGTCTAGCATTTATTG
CCTCTAGTGTCCACAATTTCGATGAACGCGACAATAGGCGGGGCTTCCTC
CATGTACAAAGACTAGTTCGTTGGTACAGGGCCCGAGAGCAAGGTTCTTC
TAGTGTGGTACCCGGACACGGGCTGCATCGCCTCCCAGGGCGCCCACACG
TCTTGGCTGCTTGTGGGAAATCCAATTTTTGTGGGGACATCGCATACACA
CCAGCACGTCACTTGTTCCCTTCGATGGCCTGTCCGCCGTACTACGACCG
TCCCACCCCCAACCCTGGCGGCGGACGTCGGAGCCGCCAAGGCTCGATCG
CTTCCATCCCTGTATCGCACGCTGGACATTCCTCTCCGTACCAAAGGGAT
ACGTCGGACGGACGACCGCAGGCCTCGTCTCCTTCCTACGGCCCGGGGGC
GGGGGAGGAAACGGTCGGGCACTACCCGCCCTCCCACCACCACCCCCATC
CCTCCCACTTCTCGCGCCCAGGTACCGAGGGGCCGTACGCGGAAGGGATG
ACGGGCCGCAATAGCTCCCCTCGTCAGCATCCCCAGCCCCCTTCTTACAC
TGTGCCGGGCTCCACGCACCCTTACTACCCCCACCATCCTTCCTACGGCC
TGGGAGGGGGCCCCGGGGAGATGGCCATGCCTGTCTCGGAGCACCTGGGA
CATTACCGAGTGCCCCATGCCTACCATGGCCCTCCTTACCCCGACAATCA
CCCGCCGCCGCACCACGCGAACCTGCCGCCGCCTCATTCCCCCCAACAGC
AGCATGGCTTCGACCCGGCCCACCGTCCTTCTCCTCCTCGATCCCGCCCG
GCGCCCGGGGCGCTTATCTGCCCCCCCCCTGCCATCAACACCTCCCTCGC
CTCCTCCACCGTTTCCTCCTCCGGCATGCATTCCTACCCTGCGCATCCTT
ACCCGGCCCCGCACGTCACCTCCTCCAGTGTGACCACCAGCTTTCCCGAC
GTCAACCAGGCCACCCCTGCCGCGTTGACGGTCACGAGCTCGGGCGGCAT
CCCCCTCTTGGAGTATGTGGACCGGGAGGGCTCGACCTGCATCATCTACG
AGGTGCCCACCGCCTTTTCGGAGGCGGCCTTGGCCTGTGCTGGGCCTGAG
GGTTACCCTCCCTGGTCCCCCGGGGCGCCGATCCAGACGGTTCGGGATGG
AGACGTGGTTACCTCGGGGCCCGACGGCTGCAATTTGTTCGTCTTCCACC
TTCCCAGCAATTTCAGCAACGCGGACTGTTTCAATCTGTTCAGTGCCTAC
GGGACCATCATTTCCGTCCGGATTATGGTGGAGAAAGGCACGGGCCGGAG
CCGGGGCTTTGGCTTCGTCTCCTTCGACTCGGAAACGGCGGCCGAGCTGG
CGATTGAGATGTTGGACGGTTACCAGCTCGGGCACAAACGTTTGAAAGTC
CAGCACAAAAAAATGGAGTCACCCTCGGTATGTCTGGACGAGGAAGGGAG
GGCCGGGCGAGGCGGGAGCCAGGAGGGCGGGAAGGAAGGCGGGGGGGAGG
GCGGGAGGGAGGGCAGGGGCCGGTCGTGGCACCATGGGGAAGCGTACGAA
GCGCCCCGGCCCGCCTCTCAGGCCTCGGACGTGACCTTCAGTAGCAGCTC
CTCATCTGCCTCCTTCCCGCACCTGCCCCGTGGCCGGAACCTGAAGGACG
GCGAGGGCGGGCGGGGAATCTACACCTCCGGGTATCGTCCCCCGTTCCAG
GGAGGCCGGGGTCGCGGCGCGGGCGGCCGAGGTCCAGCTTCGTCGTACGC
GGCGTCCTCCTACCCTCCGTACAGGGAGCGGGGGGGGCGAGGCCGTGCCA
ACGCCTTCTACCTCCCTCCCTACCCGCACGCGCCCCTCGAAGCCTTTCCC
CCCCGGTATTATGAGCCGCCCTACCCGTCCTACGCGGACCAGTCCCCTTA
CCCTCCCCACCTTCCCCCCCACTCCCATCCCGGCGCCGGAATGCCCTCCT
CCACCCCTCCGCACTACTCCCCTTACATGGGCGGCGGAGACCTCCCTCCC
TCCCTCCCTCCTTCCCTCCCTCCCCCCTCCTACTTTCCGTCGTACGGGCC
CCTCCCTTCTCGGTCCTACGCCGGGGAAGGGGGCGCCAGGGGGGAGGAAG
GGGAGATGGCCTTCTATACCCACGGATACCCGTCGGCCGAGCGAGGGCGG
GGCCGTGGGTGGTATCGAGGGAGGGGGGGAGGAAGGGGGGGAGGGAGGGG
TTACTTTCGTGTCTCTGCCCCCCCGGAGGACCGATATCATCGTTTGTCTT
CCCACTCCTCCTATCGGCAGGGACGGGCAGATACAGGGAAAGAAGAGGAA
GGGAGGGAGGGAGCGGGGGAGGGAGGGAGGGAGGGCGGGGTCGATCGGCC
GAGTCTGACCATTGACGACCTGAGTGGCTTGACCCTGGAAGGAAATGAGG
AGGCTGAGGGAGGGAGGGAGGAAGGGCCTCGACAAGGGATGGCCGAGGTG
GAGGAAGGGGGGGAAGGGGAAGAGGGAGAGCCCTGGGAGGTGGCCTCGCC
GCTCCCGGGAGGGGGAGGGGGGGAGGGAGGGGGAGAAGGGGAGGGAGGGA
CGAAGGGGTTGACAGCGGGCGATCAGACCCCGCGTCCTTCCTCCACCGCG
GCGGGGAGTACGACCACGTCCCCTGGGGATGGCTAA back to topprotein sequence of rna2367 >rna2367-protein ID=rna2367-protein|Name=rna2367|organism=Nannochloropsis gaditana|type=polypeptide|length=260bp
MSSMNEGEVQTDTSLDIKFASSLEVALYVRWRRALSGDESIPEAEPSSTL
EKARNRWWQEIIREYTKLERRYHGLTHLQQMFGEMDRHVGRLTRPDRVAL
AVFFHDINEEKSAERFNAFAQEATRMSKEDIGVVHAYILATKTHQMSQSP
EVDDDLALFLDIDMSILGQPREIYMRYAGAIRAEHKHVPRSLYLEKRAQI
LSSFIEGGGKYIKGGRQSLRREIYASQFYKNELEEQARDNIAGEIYMLRR
GVIPYEDKER back to topmRNA from alignment at CM002459.1:210577..211938- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2367 ID=rna2367|Name=rna2367|organism=Nannochloropsis gaditana|type=mRNA|length=1362bp|location=Sequence derived from alignment at CM002459.1:210577..211938- (Nannochloropsis gaditana)
CGGATATCAACATCTCTGTGCCATTACTGTGGAACAATTTCTTTACTCAC
GACTGTGCTCGCATCTGGACTCTAAGCATGTCTTCGATGAATGAGGGGGA
AGTACAAACAGATACATCCCTTGATATCAAGTTTGCGTCTTCTTTGGAGG
TCGCATTGTATGTTCGCTGGAGACGTGCATTAAGTGGAGATGAATCCATA
CCAGAGGCGGAGCCCTCATCGACGTTGGAAAAAGCACGCAACCGCTGGTG
GCAAGAAATAATAAGAGAGTACACCAAGCTAGAAAGAAGGTAAGGTGGAT
GCTTCCCGCAGTCAAAGAGGGAAAGGATGTTAAAGAACAGAATTCTCCAT
TGCTGGGTTTCTTATCAAGACCGTCCCCTTTCATTTACTACATTTTACGA
GATACCATGGCTTGACACATTTGCAACAAATGTTCGGAGAGATGGATCGT
CATGTGGGCAGGCTTACCCGCCCAGATCGGGTCGCACTCGCAGTGTTCTT
TCATGAGTACGTAAAATGTCGTTAATGAAGCATATGTGATCTTGTTTATT
TCAAAAAAAAAATCATCACCGGTATCTCCAAGTTTAATATACGATCCGCG
GAGCAGTATTAATGAGGAAAAGAGTGCGGAGCGATTCAATGCGTTCGCGC
AAGAGGCAACACGGATGGTACGCATGTAAAATATGACGCTCGGGAGAGAT
ACTTTATAGCTTGGAGCCCATCACAGTTTTTTTTTTTGAATCACTACAGT
CTAAAGAGGACATAGGCGTGGTGCATGCTTACATACTGGCGACCAAGACA
CACCAGATGTCGCAGTCTCCTGAGGTCGATGACGATCTCGCCCTCTTTCT
TGACATCGACATGAGCATCCTTGGTCAACCGCGCGAGATTTACATGCGGT
AAGGACATAAGTATAAGAATCCCGCATCGGTGTAAGAATACTCTCTTGCG
AAGAAGGGGTGGTTGTTATTTTCCTCCTTTGTCTCACCTGTTGAGCCCTA
TCTCTATCCATCTTTTCCAGGTATGCAGGAGCAATTCGAGCCGAACACAA
GCATGTCCCTCGTTCTCTTTACCTTGAGAAGCGTGCACAAATCCTCTCGT
CTTTCATAGAAGGGGGAGGAAAATACATCAAAGGGGGAAGACAAAGTTTG
AGAAGAGAGATATACGCCTCTCAATTCTACAAGAATGAGTTGGAGGAGCA
GGCGCGCGACAACATCGCGGGAGAAATATATATGCTAAGGAGAGGAGTAA
TACCATACGAAGACAAGGAGCGTTAAACCTCATTAAGCTGAGGGTACGAC
GCATGATAAAATTAAAAGGACGTAAGACAAGTTTTTCGTAAGATTGCGGA
GGGAAATATTCC back to topCoding sequence (CDS) from alignment at CM002459.1:210577..211938- >rna2367 ID=rna2367|Name=rna2367|organism=Nannochloropsis gaditana|type=CDS|length=3915bp|location=Sequence derived from alignment at CM002459.1:210577..211938- (Nannochloropsis gaditana)
GTATGCAGGAGCAATTCGAGCCGAACACAAGCATGTCCCTCGTTCTCTTT
ACCTTGAGAAGCGTGCACAAATCCTCTCGTCTTTCATAGAAGGGGGAGGA
AAATACATCAAAGGGGGAAGACAAAGTTTGAGAAGAGAGATATACGCCTC
TCAATTCTACAAGAATGAGTTGGAGGAGCAGGCGCGCGACAACATCGCGG
GAGAAATATATATGCTAAGGAGAGGAGTAATACCATACGAAGACAAGGAG
CGTTAATCTAAAGAGGACATAGGCGTGGTGCATGCTTACATACTGGCGAC
CAAGACACACCAGATGTCGCAGTCTCCTGAGGTCGATGACGATCTCGCCC
TCTTTCTTGACATCGACATGAGCATCCTTGGTCAACCGCGCGAGATTTAC
ATGCGTATTAATGAGGAAAAGAGTGCGGAGCGATTCAATGCGTTCGCGCA
AGAGGCAACACGGATGATACCATGGCTTGACACATTTGCAACAAATGTTC
GGAGAGATGGATCGTCATGTGGGCAGGCTTACCCGCCCAGATCGGGTCGC
ACTCGCAGTGTTCTTTCATGAATGTCTTCGATGAATGAGGGGGAAGTACA
AACAGATACATCCCTTGATATCAAGTTTGCGTCTTCTTTGGAGGTCGCAT
TGTATGTTCGCTGGAGACGTGCATTAAGTGGAGATGAATCCATACCAGAG
GCGGAGCCCTCATCGACGTTGGAAAAAGCACGCAACCGCTGGTGGCAAGA
AATAATAAGAGAGTACACCAAGCTAGAAAGAAGGTATGCAGGAGCAATTC
GAGCCGAACACAAGCATGTCCCTCGTTCTCTTTACCTTGAGAAGCGTGCA
CAAATCCTCTCGTCTTTCATAGAAGGGGGAGGAAAATACATCAAAGGGGG
AAGACAAAGTTTGAGAAGAGAGATATACGCCTCTCAATTCTACAAGAATG
AGTTGGAGGAGCAGGCGCGCGACAACATCGCGGGAGAAATATATATGCTA
AGGAGAGGAGTAATACCATACGAAGACAAGGAGCGTTAATCTAAAGAGGA
CATAGGCGTGGTGCATGCTTACATACTGGCGACCAAGACACACCAGATGT
CGCAGTCTCCTGAGGTCGATGACGATCTCGCCCTCTTTCTTGACATCGAC
ATGAGCATCCTTGGTCAACCGCGCGAGATTTACATGCGTATTAATGAGGA
AAAGAGTGCGGAGCGATTCAATGCGTTCGCGCAAGAGGCAACACGGATGA
TACCATGGCTTGACACATTTGCAACAAATGTTCGGAGAGATGGATCGTCA
TGTGGGCAGGCTTACCCGCCCAGATCGGGTCGCACTCGCAGTGTTCTTTC
ATGAATGTCTTCGATGAATGAGGGGGAAGTACAAACAGATACATCCCTTG
ATATCAAGTTTGCGTCTTCTTTGGAGGTCGCATTGTATGTTCGCTGGAGA
CGTGCATTAAGTGGAGATGAATCCATACCAGAGGCGGAGCCCTCATCGAC
GTTGGAAAAAGCACGCAACCGCTGGTGGCAAGAAATAATAAGAGAGTACA
CCAAGCTAGAAAGAAGGTATGCAGGAGCAATTCGAGCCGAACACAAGCAT
GTCCCTCGTTCTCTTTACCTTGAGAAGCGTGCACAAATCCTCTCGTCTTT
CATAGAAGGGGGAGGAAAATACATCAAAGGGGGAAGACAAAGTTTGAGAA
GAGAGATATACGCCTCTCAATTCTACAAGAATGAGTTGGAGGAGCAGGCG
CGCGACAACATCGCGGGAGAAATATATATGCTAAGGAGAGGAGTAATACC
ATACGAAGACAAGGAGCGTTAATCTAAAGAGGACATAGGCGTGGTGCATG
CTTACATACTGGCGACCAAGACACACCAGATGTCGCAGTCTCCTGAGGTC
GATGACGATCTCGCCCTCTTTCTTGACATCGACATGAGCATCCTTGGTCA
ACCGCGCGAGATTTACATGCGTATTAATGAGGAAAAGAGTGCGGAGCGAT
TCAATGCGTTCGCGCAAGAGGCAACACGGATGATACCATGGCTTGACACA
TTTGCAACAAATGTTCGGAGAGATGGATCGTCATGTGGGCAGGCTTACCC
GCCCAGATCGGGTCGCACTCGCAGTGTTCTTTCATGAATGTCTTCGATGA
ATGAGGGGGAAGTACAAACAGATACATCCCTTGATATCAAGTTTGCGTCT
TCTTTGGAGGTCGCATTGTATGTTCGCTGGAGACGTGCATTAAGTGGAGA
TGAATCCATACCAGAGGCGGAGCCCTCATCGACGTTGGAAAAAGCACGCA
ACCGCTGGTGGCAAGAAATAATAAGAGAGTACACCAAGCTAGAAAGAAGG
TATGCAGGAGCAATTCGAGCCGAACACAAGCATGTCCCTCGTTCTCTTTA
CCTTGAGAAGCGTGCACAAATCCTCTCGTCTTTCATAGAAGGGGGAGGAA
AATACATCAAAGGGGGAAGACAAAGTTTGAGAAGAGAGATATACGCCTCT
CAATTCTACAAGAATGAGTTGGAGGAGCAGGCGCGCGACAACATCGCGGG
AGAAATATATATGCTAAGGAGAGGAGTAATACCATACGAAGACAAGGAGC
GTTAATCTAAAGAGGACATAGGCGTGGTGCATGCTTACATACTGGCGACC
AAGACACACCAGATGTCGCAGTCTCCTGAGGTCGATGACGATCTCGCCCT
CTTTCTTGACATCGACATGAGCATCCTTGGTCAACCGCGCGAGATTTACA
TGCGTATTAATGAGGAAAAGAGTGCGGAGCGATTCAATGCGTTCGCGCAA
GAGGCAACACGGATGATACCATGGCTTGACACATTTGCAACAAATGTTCG
GAGAGATGGATCGTCATGTGGGCAGGCTTACCCGCCCAGATCGGGTCGCA
CTCGCAGTGTTCTTTCATGAATGTCTTCGATGAATGAGGGGGAAGTACAA
ACAGATACATCCCTTGATATCAAGTTTGCGTCTTCTTTGGAGGTCGCATT
GTATGTTCGCTGGAGACGTGCATTAAGTGGAGATGAATCCATACCAGAGG
CGGAGCCCTCATCGACGTTGGAAAAAGCACGCAACCGCTGGTGGCAAGAA
ATAATAAGAGAGTACACCAAGCTAGAAAGAAGGTATGCAGGAGCAATTCG
AGCCGAACACAAGCATGTCCCTCGTTCTCTTTACCTTGAGAAGCGTGCAC
AAATCCTCTCGTCTTTCATAGAAGGGGGAGGAAAATACATCAAAGGGGGA
AGACAAAGTTTGAGAAGAGAGATATACGCCTCTCAATTCTACAAGAATGA
GTTGGAGGAGCAGGCGCGCGACAACATCGCGGGAGAAATATATATGCTAA
GGAGAGGAGTAATACCATACGAAGACAAGGAGCGTTAATCTAAAGAGGAC
ATAGGCGTGGTGCATGCTTACATACTGGCGACCAAGACACACCAGATGTC
GCAGTCTCCTGAGGTCGATGACGATCTCGCCCTCTTTCTTGACATCGACA
TGAGCATCCTTGGTCAACCGCGCGAGATTTACATGCGTATTAATGAGGAA
AAGAGTGCGGAGCGATTCAATGCGTTCGCGCAAGAGGCAACACGGATGAT
ACCATGGCTTGACACATTTGCAACAAATGTTCGGAGAGATGGATCGTCAT
GTGGGCAGGCTTACCCGCCCAGATCGGGTCGCACTCGCAGTGTTCTTTCA
TGAATGTCTTCGATGAATGAGGGGGAAGTACAAACAGATACATCCCTTGA
TATCAAGTTTGCGTCTTCTTTGGAGGTCGCATTGTATGTTCGCTGGAGAC
GTGCATTAAGTGGAGATGAATCCATACCAGAGGCGGAGCCCTCATCGACG
TTGGAAAAAGCACGCAACCGCTGGTGGCAAGAAATAATAAGAGAGTACAC
CAAGCTAGAAAGAAG back to top
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