|
|
Properties
| Property Name | Value |
|---|
| Product | fad-binding protein |
| Orig transcript id | gnl|cribi|Naga_100109g3.6588.mrna |
| Orig protein id | gnl|cribi|Naga_100109g3.6588 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002459.1 | supercontig | CM002459.1:188019..189827 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2361 ID=rna2361|Name=rna2361|organism=Nannochloropsis gaditana|type=mRNA|length=2265bp
AGCGGCTTTAGCTTTCCTGACCGATCGATTTTCCACATACCGGGAACAAA
CTTGTGATCATCTGGATCATCAAACCATCTCAATCTTTGTTTTTAGAAAC
AGAGGGAATATACCACTTCACATAAACGTGATGCGTGTACAAACGCGCCA
CACTCCACACAAGCTTGAAGGGGGTGGGGAGGTTAAAACACCCCGTGAAA
AAAATCACTAAGTACGAGAATACAACCCGCCACGTTTACACAGTCATTCA
TACCCATGACTCTTGAATGCTTGGGGATGTCCAAGAGGATGATAAGTGTT
GCCTGCTTTTTGCATTTTCAGGACATGTCGTCGAACGTGACTTTCCTCAT
ATCAACCGACTTCTGTGCTTCTGGTTGCCACCCCACTCCCAGGAAATACA
TGTCGCTTATTCGCGTGAAAGCAGCTTAATTGCAGCCTAAATGGAAGAAT
GTGCACATGACACGGAGATGCTAAACAAAGCTGAGGCATCGGGTACCTCG
CCCTCGCCCTCGAGCTTGGCTACCGGATTTTTCCCCGGCTCGACCAACCT
ACAAGTCGATGAAATTTACCTTTTGACGCGGAAGGAGCTTTACTTTGGTC
CAAATCATGCCCATACTGCAATGGCTCTGGCAGATTTAGACGGCGACGGG
CAGCAGGAATTCATGGTCGGATCATTGGACGGGACCCTGGCGATCTACAA
AGGTCTTGCAGGGAGGGTACCATGGGCCGTTGCGACAGGGCTGGGGATGC
TCCGTGTCTTCTCGTGTGGGCAGCTTTTGCCGGACTGTGACATCGAGACA
CAAAGCCCCCTCTCCAAGCATTGTTCCGAGAAAGTGAGTGGAGAGAAAGG
AGGAAAGGCACAGGCAACGGCGGGGACACGACCTGCACGCCCCAAGCAGC
TAGTCGCCCTGACCGTTGAAGGCGATGTCCACCTCTTCGACTTCAAAAAC
GACCCGTCTTTGCTAACTCTAACGTCTCCGACCAAACCAAGCTACGCCGA
GAAGCACGGCGGCCGTTCCAGTCCCGCGCAGCACACAGACGTGCCCGTGT
TCTCTGCCTGGGACACGCCGTCCTTGAGTTTGCAGCCCAGCCATAGCTTT
ACCGTGGCGCCCAACGTCACAGCTGCGCTTATTTTGGATGTGGATGGGGA
TGGATGTCAGGAGCTTGTCTTAGGGTACACGGACGGGAAACTTCAAGTCC
TTGGCTGGCGCTCTGCCTGGCGGTTGACAGAGGACGCAGGGCCGGACGAT
TCCAGGCCGTGCTCGGAAAGGGTGCCCGGCGGAGCCCCCGTACAAATGTT
CGAGAAGGGCGTGGCGACGGCGTCCGCGTCGATCGTGTCGTTGTCAAGCC
TGGGGGCGGACGACTCGAGCGAAAGGCCCGAATGCATTGCGGTGGGTTTA
GAGGCGGGCACGATAGAGGTACTTAGGTGCAGCTCGGGGGCGGCGGGCGA
CCGGGAACCTCTCCTCACTTCGCTCGTCGAATTGCAGATCGGAGGTGGGC
TCCCTTTGCCACGTTTTGGCTGGTCGGGCCCCTTGACCTGTTGCGCGCTG
CCGAAAGACGTTGACAGCCGGGCCCGGGGACTCGCGTTTGCGGTGGCCGG
TTTGGACGGTCGGATGGGCGTGGCTGTGGTAGGGAAGGAGGGGGGCGGGG
CGGGGGAGGAGAGCCAGGCGGCCGACGAGGGGGGCCTTGGGACATGGAAG
ACGGTGTGGAGCGTACAGACGAGGCACCCACTCTACACTGTGGCGCCCCT
TTTTCTGGGCACTGGGGACGAAGGCTGGGGGTTCGCGGCCTGCGCCTGGA
GTGGTTTGACGTATTGGGTCTTGACGAAAGCTTCTTCTGCCGGACAAGCG
GGAGCCGAAAAGGTGCGAGTCTTCGACCCGTCCAAGATGCTCATGCCACC
CGTGCGTGGATTCCTCGCGGGGGCTTTTGGCCCGGACAACGAACCTTGTT
TGTTCTATAGCTGTGCAGACGGACATATCGTCGTCTTTCATGAGCTGGAG
AAGCAGCTGAGAAGACTGCAAAAAGGCACGGAGGAATATGAAGAGGAGGT
GGCCAAGGCTGCACGCGAGCTACGAGCCCCGGAGACGCAAGAGCTGGTGG
ATGCATGGGTAAAAGTACATTTGACACAAGCGGGGGAGACGGCGGGGGGG
GTGGACGAGGGAGAGACCCCACAAGCCGAGGTCCTCGAACCTGAGGAGGG
GAAGGGGGGGCCATAGCTCTAGACCACATCAATGTGATTTAAAAAATGTG
AACAGGCTGGTTTTT back to topprotein sequence of rna2361 >rna2361-protein ID=rna2361-protein|Name=rna2361|organism=Nannochloropsis gaditana|type=polypeptide|length=602bp
MPDSRRFIVPWAQHVVCFLGILTFVSQLLFVEAYRHPRSLLHMAVTSTSP
NPIHSSSTSIKELHCNVLIAGGGPAGLAAALSLARRGYQDIHVLERNPSA
EYFEVDKSYLYRIDGRGQRLTGLLGITDAMQEVSITTEEFLNITIVQADG
SVKVVKAPADPSQQTAYWLPRRALLSFLYDRIQKEDCGKAISFHWGVTIQ
RFVMPPPEETAQITAQAKIVAALGDGTPTEFVSQKVIGCDGMNSRIRKGL
EAWAASDPKKAEQIPSKSKERSIVKRVGRRWGWGRGKRDRPRFGLQYVDA
PSAGLRYKILALQDGFPLTHAEPDTPTRRETCYSYVGRPKGYFSPPLRLG
LLPFKMQGIPRTANIIASPSADIFGLEKGQDVIAFLKRELPQCDVDQMVS
PEEAERFARSSGGFFPRPQYCLDAQQVLGGRDGGQGAGGVVLMGDAIHAF
PPDLGAGVNIALLDVLDFIFSLDKTEGDWAAALPLYETLRGPQSRAVCEL
IPIGFPQQYNHMLPVQKSLKLMGVGLRAALHKAFSWVLAPPVFFMCQDVR
WDYSQVLARATRTTRVLRTVGMLLLGAVLWRWNGGRGVREFLRKMRLACE
TG back to topmRNA from alignment at CM002459.1:188019..189827+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2361 ID=rna2361|Name=rna2361|organism=Nannochloropsis gaditana|type=mRNA|length=1809bp|location=Sequence derived from alignment at CM002459.1:188019..189827+ (Nannochloropsis gaditana)
ATGCCCGACTCCCGACGATTCATCGTGCCGTGGGCGCAGCACGTCGTCTG
TTTTCTTggcatcctcaccttcgTCTCGCAATTGCTTTTTGTGGAGGCCT
ACCGGCATCCTCGTTCCTTACTCCACATGGCGGTgacttccacctcccca
aACCCGAtacattcctcctccacgtccatcaaGGAGCTGCATTGCAATGT
CCTTATCGCAGGCGGCGGCCCAGCCGGCCTAgccgccgccctctcccttg
cccgtcgAGGTTACCAGGACATCCATGTGCTGGAACGTAACCCCTCTGCC
GAGTATTTTGAAGTGGACAAGAGTTACTTGTACAGGATCGACGGACGTGG
CCAACGGCTCACCGGTCTGCTGGGGATTACGGATGCGATGCAGGAGGTCT
CCATCACCACGGAGGAATTTTTGAACATCACCATCGTCCAGGCGGACGGG
AGTGTCAAGGTGGTGAAAGCCCCCGCGGATCCGAGCCAACAAACGGCCTA
CTGGCTCCCACGCCGTGctctgctctccttcctgtacGACCGCATCCAGA
AGGAAGATTGCGGGAAGGCCATTTCCTTCCATTGGGGCGTGACAATCCAA
CGCTTTGTCATGCCCCCGCCGGAAGAAACGGCTCAGATAACAGCCCAAGC
CAAAATTGTCGCGGCCCTAGGGGACGGAACCCCCACGGAGTTCGTCTCGC
AGAAAGTCATAGGTTGCGATGGCATGAACAGCCGCATCCGAAAGGGCCTG
GAGGCCTGGGCGGCCTCCGACCCGAAAAAGGCCGAACAAATCCCGAGCAA
ATCGAAGGAAAGAAGCATAGTCAagcgggtgggaaggaggtgggggtggg
ggcggggaaagagggaccgACCTCGCTTTGGTTTGCAGTACGTGGACGCG
CCCTCTGCGGGCCTTCGGTACAAGATCCTCGCCCTCCAAGACGGGTTCCC
ACTCACGCACGCAGAGCCCGACACCCCTACGCGCCGGGAAACGTGCTACT
CCTACGTGGGTCGGCCTAAAGGTtacttctctcccccccttcgcctggGC
CTGCTCCCGTTCAAGATGCAGGGCATACCCCGCACGGCGAACatcatcgc
ctccccctccgctgaCATTTTCGGCCTGGAAAAGGGCCAAGACGTCATTG
CATTTTTGAAAAGGGAGCTCCCGCAATGTGACGTGGACCAGATGGTCTCT
CCAGAGGAGGCGGAACGGTTCGCTCGCTCCTCCGGCGGTTTTTTCCCGCG
GCCACAGTACTGCCTGGATGCTCAGCAGGtgctgggagggcgggacggag
ggcagggggcaggaggggtgGTGCTGATGGGGGATGCTAtccacgccttc
ccccctgacctgggggcgggcgtgaaCATTGCCCTGCTGGACGTCTTGGA
CTTCATTTTCAGCCTCGACAAGACCGAAGGGGATTGGGCGGCAGCCTTGC
CCCTCTACGAGACTCTCCGGGGCCCACAGAGCCGAGCCGTGTGCGAATTG
ATCCCCATTGGCTTCCCGCAGCAGTACAACCACATGCTGCCCGTCCAAAA
GAGCCTGAAACTCATGGGGGTGGGCCTGCGGGCGGCCTTGCACAAGGCAT
TCTCCTGGGTACTGGCCCCTCCCGTGTTTTTCATGTGCCAAGACGTCCGT
TGGGACTACAGCCAAGTCTTGGCGCGGGCGACGCGGACGACGCGCGTTTT
GAGAACAGTCGGTATGTTGCTCCTGGGAGCAGTCCTTTGGCGGTggaatg
ggggaaggggtgtgAGGGAGTTCCTACGAAAGATGCGCTTGGCGTGTGAG
ACGggttga back to topCoding sequence (CDS) from alignment at CM002459.1:188019..189827+ >rna2361 ID=rna2361|Name=rna2361|organism=Nannochloropsis gaditana|type=CDS|length=1809bp|location=Sequence derived from alignment at CM002459.1:188019..189827+ (Nannochloropsis gaditana)
ATGCCCGACTCCCGACGATTCATCGTGCCGTGGGCGCAGCACGTCGTCTG
TTTTCTTggcatcctcaccttcgTCTCGCAATTGCTTTTTGTGGAGGCCT
ACCGGCATCCTCGTTCCTTACTCCACATGGCGGTgacttccacctcccca
aACCCGAtacattcctcctccacgtccatcaaGGAGCTGCATTGCAATGT
CCTTATCGCAGGCGGCGGCCCAGCCGGCCTAgccgccgccctctcccttg
cccgtcgAGGTTACCAGGACATCCATGTGCTGGAACGTAACCCCTCTGCC
GAGTATTTTGAAGTGGACAAGAGTTACTTGTACAGGATCGACGGACGTGG
CCAACGGCTCACCGGTCTGCTGGGGATTACGGATGCGATGCAGGAGGTCT
CCATCACCACGGAGGAATTTTTGAACATCACCATCGTCCAGGCGGACGGG
AGTGTCAAGGTGGTGAAAGCCCCCGCGGATCCGAGCCAACAAACGGCCTA
CTGGCTCCCACGCCGTGctctgctctccttcctgtacGACCGCATCCAGA
AGGAAGATTGCGGGAAGGCCATTTCCTTCCATTGGGGCGTGACAATCCAA
CGCTTTGTCATGCCCCCGCCGGAAGAAACGGCTCAGATAACAGCCCAAGC
CAAAATTGTCGCGGCCCTAGGGGACGGAACCCCCACGGAGTTCGTCTCGC
AGAAAGTCATAGGTTGCGATGGCATGAACAGCCGCATCCGAAAGGGCCTG
GAGGCCTGGGCGGCCTCCGACCCGAAAAAGGCCGAACAAATCCCGAGCAA
ATCGAAGGAAAGAAGCATAGTCAagcgggtgggaaggaggtgggggtggg
ggcggggaaagagggaccgACCTCGCTTTGGTTTGCAGTACGTGGACGCG
CCCTCTGCGGGCCTTCGGTACAAGATCCTCGCCCTCCAAGACGGGTTCCC
ACTCACGCACGCAGAGCCCGACACCCCTACGCGCCGGGAAACGTGCTACT
CCTACGTGGGTCGGCCTAAAGGTtacttctctcccccccttcgcctggGC
CTGCTCCCGTTCAAGATGCAGGGCATACCCCGCACGGCGAACatcatcgc
ctccccctccgctgaCATTTTCGGCCTGGAAAAGGGCCAAGACGTCATTG
CATTTTTGAAAAGGGAGCTCCCGCAATGTGACGTGGACCAGATGGTCTCT
CCAGAGGAGGCGGAACGGTTCGCTCGCTCCTCCGGCGGTTTTTTCCCGCG
GCCACAGTACTGCCTGGATGCTCAGCAGGtgctgggagggcgggacggag
ggcagggggcaggaggggtgGTGCTGATGGGGGATGCTAtccacgccttc
ccccctgacctgggggcgggcgtgaaCATTGCCCTGCTGGACGTCTTGGA
CTTCATTTTCAGCCTCGACAAGACCGAAGGGGATTGGGCGGCAGCCTTGC
CCCTCTACGAGACTCTCCGGGGCCCACAGAGCCGAGCCGTGTGCGAATTG
ATCCCCATTGGCTTCCCGCAGCAGTACAACCACATGCTGCCCGTCCAAAA
GAGCCTGAAACTCATGGGGGTGGGCCTGCGGGCGGCCTTGCACAAGGCAT
TCTCCTGGGTACTGGCCCCTCCCGTGTTTTTCATGTGCCAAGACGTCCGT
TGGGACTACAGCCAAGTCTTGGCGCGGGCGACGCGGACGACGCGCGTTTT
GAGAACAGTCGGTATGTTGCTCCTGGGAGCAGTCCTTTGGCGGTggaatg
ggggaaggggtgtgAGGGAGTTCCTACGAAAGATGCGCTTGGCGTGTGAG
ACGggttga back to top
|