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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100109g18.6590.mrna |
| Orig protein id | gnl|cribi|Naga_100109g18.6590 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002459.1 | supercontig | CM002459.1:160256..163965 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2346 ID=rna2346|Name=rna2346|organism=Nannochloropsis gaditana|type=mRNA|length=1840bp
TGAAGTGCCCTCGCCATGTCTTGACTTGCATTAAGCGAGGCTTTGATCAC
CGCATGTCCATGTGCAACTCGCCCAAGCACGCGCAAGCAATCAAAACCGG
AGAGAGGTGTCTCATGGCGCCCGTGGTCTCCGTGTTCTGACACCAAGACT
GCCTTGTTTGGGGACGAATGCCCGTCCTAACGTCTGGACATATAAGGAGA
ACTTGACTAGGCGTGGTAGTAGTGTATAAGCAATGAGTGTGACGACGGGC
GGGGGTATTGCCATATGCTCTCCTATCCCACTTCCTCGGTGCACTGCAAC
AACACCCCAGCTTCTTCCGATTGATGTTCGCATCTACTGACAGCAATTCT
CATCTGACCTGGTATCCTTGTGTCTAACCAGGTTGATTTGCACGAGCTTG
GTTTCTGTCATCAGGGAAACGATGAAAGGCAGCAACACAAGAACGGATGA
CAGTCTGTCAGGCATTAGACGGGGTGACGCGACCCGTAAAGTCAAGAAGA
AGAAGATCAAGGGCAAGCTGTTCACACTCACCACGAGCCCTTTGCCAAAG
GCCAAATTTAAGGCAATTGTAGCTGCTGTGTATGCCCGCAAGCAGGCAGA
AGCAGAGGAGCTTCGCACCCAAATAATTCACAACGCAAAATTGGCCGAAG
AAGAAGCCTTTTCAAGACATGGTCTGGACAGCTGCAATCAGGCAGGAGGG
TGCGGAGACGAGACGCAGGCGTTGCCCAAAGTCTTGGAATCGGGTTTCGA
CGCGTTGAAGGCCTATGATGAGCATGGAAGACGAATCGCTCCCAAGGCAT
TGACGACGGTGCCCTCCTTGATGCTAGGGTCCGGGCGTTGGCGCGAGCGC
GAAGGAAAAGTAGCCGCAGGCAGAAAGGGCGAAGAGGAGGACAGCAGTGA
CGAAGAGGAGGAGGGAGGGGGGGAGGAGGGGCAGGACACGCTCGCTGTCA
GCCAAGGAGGGAAAGGTCGTAAACGGGAGCAGACGATGGCCGACTTGGTG
CAATTGCACCGCGATCTTGCCGAGCTTCAAAGGACGCGGACGGAGCTGCG
ATGGTTGCTGGAACAGGTGGAACGCCTGGAGTACGAAAGCCTCTAAGAGA
GGGCTGGGAGGGTCTTGGAAGAGGGAAGGGATTGGGAAGGAAGGGAAAGA
AGGAGAGCGAATCGTTGTTATGTTGACACGGGGAGGCTCGAGTGGTCTCG
CAGAGTTCGTCGAAATCGACAGAGAGAGCGGGAGGGAGGACGGGGATGAC
TTTGAGGATATATGATGGCGTCTCACAGACCTTCTAACGCATCATTTTTG
CTATTTTACGTGGTCTGATGCCTCTTGCTGCTTGTGACTGTGCGCATATG
CTCTTAAGCAAAGAGTTTACGTTCCAATACATATGGTGTAGCGGAACAGA
AGCACTCGTGGGCGTTGGGTTAAATATTAATGGTGGGTATCGTAGCAATG
CAGGCAGGTAATCAGATAATTTATCAAAAACGGAGGTGCAGGCCCGCTAA
TGATTGAACACACCCACAGCATGATAATGACGAAGCGGTAGGTAGCGGTA
TCCCGAACTTCTCGTCGGCATCGGAATATAAAGTTGTGAGGGTGCACAAA
CGCTCCTCCTTACATGTAAAAGAGGTATTGAAGATAGAACAAGGAATCAA
ACCTAAGAAACTGATAACTTGACGAAGACAAGAGAAATAGAGAGATTGCC
CTTTTTAAAAAAAGGCAGGCGAATCGTGGTTCACGTCGAAAGCCACGGTA
AATGAGAGAGATCACAAGCCTGGTTCCTTGACAGATCGATTGAAATAATG
TAGTTATTGCAGAAAGGAAAAAAATGCATCACGCATTGCA back to topprotein sequence of rna2346 >rna2346-protein ID=rna2346-protein|Name=rna2346|organism=Nannochloropsis gaditana|type=polypeptide|length=734bp
MQHRPVELLTTCSFRSRPSCSHGAPPVLGPLSSSRCKNNASPEHDGSSRF
LGQKTDEAKAILSSHNMEDDVIKMSGVGSRRHSQDIPGGLPALRADRTAE
QLAENNKMPTSIAIHMIQRENSPCTGENKEDVMDTKVAVNQARTEDLQVT
SPSVIAACMRRFRKQPPMSRQERDEYRQQQERLAAKSRAADNELLGTKEE
DFWWIRPPQAASVCRGLREVESSRHGFYVSEKIEGRSSVQTTEVQDLEKE
ADVLLRRSQELLGSTPSFSSSSSSSPPLSATALVMEDDLVLPSWQSNAGE
AGYPDCGRQGVEASARGGEGAIAQIDPSTSVGLAAQDDLLVEHGQASSPP
ALPFVSRNVGGRPLSPPLVSPLPASTPRVQEGEVVRPPSPLPPTLSISIH
SIEAIQEETLPTFYRQQVQAMDALERRRALRRAWRSRAPLAGAGGAAVGP
GMRLQPQGTRSGPMERTEQTLWLASASAPSATVCQPALGKDLTSHRPGWA
CGGGRGCCDNKEGCDILVTSLPMSYSPPSSSPPPLFPSFSSGWRDRLPGS
IHLASYPAHSSCLPASHRQHLPNEAMRLVKHLAGEVVHTRLFASPHPLLS
PQADPPHVVGQRVRGALREMETDGGDEEKKKGTDMTEDEGGQEEKDEGAS
NRGGKQDNFYRHTAPSSSESVDSLALEEEGEASLWWDVEDEATCGEGMGE
EVSEYRDDAIVQALVARRRELLLELSLGERGRLA back to topmRNA from alignment at CM002459.1:160256..163965+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2346 ID=rna2346|Name=rna2346|organism=Nannochloropsis gaditana|type=mRNA|length=3710bp|location=Sequence derived from alignment at CM002459.1:160256..163965+ (Nannochloropsis gaditana)
CTGAGCCCTTTCCCCGAACGAACAGAGTTATTGCCAAAAGTACTTCGCCT
CCATACATCGGTTGTACGTCTCTTAGACTTATCTACCAAAGTTCACACAG
TCGCCTGCCGTAGTAGATGCAGCACAGGCCTGTTGAACTCTTGACAACGT
GCTCTtttcgctcccgcccctcgtgTTCGCACGGGGCGCCTCCTGTTCTT
GGACCTCTCTCTTCGTCGCGGTGCAAGAACAACGCCTCCCCTGAGCACGA
CGGATCGTCTAGGTTTCTTGGTCAGAAGACTGACGAAGCAAAGGCAATTT
TGTCATCCCACAACATGGAAGATGACGTAATCAAGATGAGCGGGGTTGGC
TCAAGGCGGCACTCTCAAGACATTCCTGGAGGTTTACCCGCCCTGAGAGC
CGATCGAACAGCGGAGCAGCTCGCAGAAAACAACAAGATGCCAACCAGCA
TTGCCATTCACATGATACAAAGGGAAAATAGTCCTTGTACTGGAGAAAAC
AAAGAGGACGTCATGGATACCAAGGTGGCGGTAAACCAGGCACGGACCGA
GGACCTTCAAGTGACCTCCCCGTCCGTCATCGCCGCGTGCATGCGTCGAT
TTCGGAAGCAACCTCCCATGTCGCGACAAGAGAGAGACGAGTAccgacag
cagcaggaacGTCTGGCGGCAAAGAGCCGCGCAGCGGATAATGAGCTTTT
GggaacaaaggaggaagatttTTGGTGGATACGACCGCCTCAGGCGGCCT
CTGTGTGTCGAGGTCTGAGGGAGGTCGAATCTTCCCGGCATGGTTTCTAT
GTCTCTGAGAAGATTGAAGGTCGATCCAGCGTACAGACGACGGAAGTGCA
GGatttggaaaaggaggcggacgtCCTCCTGAGGCGGAGTCAGGAATTGC
TTGGGAgtaccccttccttttcctcctcctcctcctcctctcccccgctg
tCGGCGACAGCCCTGGTAATGGAAGACGAcctggtcctcccctcctggca
AAGCAACGCAGGAGAGGCGGGCTACCCGGACTGCGGAAGACAAGGTGTCG
AGGCCTcggcgcggggaggggaaggagcgatCGCCCAAATCGATCCGTCG
ACCTCCGTCGGCCTTGCAGCCCAAGACGACCTGTTGGTGGAGCACGGTCA
agcctcgtcccctcccgccttgcccttcgTTTCCCGGAACGTCGGCGGGC
GGCCtctgtccccgcccctcgtctccccccttcccgcctccaccccccga
gtccaggaaggggaagtcgtccggccgccctcccctctcccgccaaccct
ctccatctccataCACAGCATCGAGGCGATCCAGGAGGAGACGTTGCCCA
CCTTTTATCGGCAGCAAGTCCAGGCGATGGACGCGTTGGAACGTCGGCGG
GCTCTGCGACGAGCCTGGCGGTCACGGGCGCCCCTGGCCGGTGCCGGAGG
CGCCGCGGTTGGCCCGGGGATGAGGTTACAGCCACAGGGAACCAGGAGCG
GACCGATGGAAAGGACGGAGCAGACCTTGTGGCTTGCTTCGgcgtccgcc
ccctccgccaccgtctGCCAGCCAGCCTTGGGCAAAGACCTTACTTCTCA
CCGCCCTGGTTGGGCATGCGGGGGTGGCCGGGGTTGCTGCGACAACAAGG
AGGGCTGCGACATTCTcgtgacctccctccccatgtcctactctcctccc
tcgtcctcccccccccccctcttcccatccttctcctctggGTGGCGCGA
TCGACTGCCAGGTTCGATCCACCTCGCTTCCTATCCAGCCCACTCATCtt
gcctccccgcctcccatcGACAGCATCTGCCCAACGAAGCCATGAGGCTT
GTCAAGCATTTGGCAGGAGAAGTTGTGCACACCCGCCTGTTTGCcagtcc
ccatcccctcttgTCCCCTCAGGCGGACCCGCCACATGTGGTAGGGCAGC
GTGTGCGGGGGGCACTCAGGGAAATGGAGACGGAcggcggggacgaagag
aagaaaaaagggacagACATGACCGAAGACGAGGGTgggcaagaggagaa
ggacgaaggagccAGCAAtaggggcgggaagcaggaTAATTTCTACAGGC
ACACggcgccgtcctcgtccgaaAGTGTGGACAGCTTAgccttggaagag
gaaggggaagcaagcCTATGGTGGGATGTAGAAGACGAAGCAACGtgcgg
ggagggcatgggggaggaggtttcCGAGTACAGGGACGACGCGATTGTGC
AGGCCTTGGTGGCAAGGCGACGGGAACTCCTGCTCGAGTTATCGTTGGGA
GAAAGGGGCCGGCTGGCATGACACACTGGTTTAGAATGCAGCATAGCGAT
GGTAGTGTAAGAAAAAACTATAGTTATTGAGAacacggggaggaagaaca
atGGGTTGTGCGGAGGTATGGTAGGGTGGCGATAGCGAAAAGAGCATGGG
GAGATGTTCACGGATTGGCTTGAGGCTTTTGTAAGAATTCAGACTGCGCA
TTTCGCACAGGCAGTTGATTTCAGCGACTCATAGAATCATTCGCACGAAA
AATTTAAGGCAGCTTCATGTAGCTGTGGTTAAATTAGTTAGTTAGTAGTT
CCTATCGAATGCTTCTCTTGCCAGCACTGACTTCACTCACAACTCTTCga
atccttcctccctcagcttTCGGAAAAACACAGGTTGCTGCCTTCTTTTA
GTCTGTGTGATACCTGTCAACGAGAAGCTGCTGTATGTCGGTACCCAAAG
GGCAGAGCATTCGCCCAAACCGAAAAGGTCAGCGACCGCTTCAGCCATGG
CgccattcttttcctcttgGTTCAAAGCAGCGGAGGTATTCGACCCAAAC
TGTCCAAACCAGACCCCTGATTCCGGTTTGGCCGAATCCATGTCTGCATT
TATCACGCGCCAACCTTGGGGTACGTGCTCGGCAAACCACTTTGGAAGGT
CGGCTGTGTCCGACGGCACGAACACGCTGACCTCGCTTGaatctttcctt
tccgccgCCCAAGCCTTCATTGCTTCTAACGTTTGAGTTTTTATTATCGA
TTCGTTTACTTGCCTCCAAGTTTTGGCTTCCCAATCCCCTTTCTCGTTGT
TTCCGATCCTAAAGTGCGCACATAGATGAAGAGGCTTGTACTGCTTCCGA
CGCGGATCCATGACACGCAATACTCGTTGCGAAAGCGAAGCTGAAAGCTT
AGAAACCACAGCCCACATTTCTTTTGACTCGAACATTCGCACCATGTCAC
CGGGTATATAAAAATCACGCGTTGTACCCGTCTTTTCGACTGCCCCCGGG
CTTTCTGCTGCAGGAGACCAATTTTTGGGGAAACTGTTGGCAAAGTGTTC
TTCAGCCTGATGACCAGCTTTCACCATGTCCGAGTCGACAAAAATTGCAT
CCCAGGGAACATCAGTCCATACTGCATGCGCGAATCGTTTTTGACCCTGC
GCATAGACCAATGTGGGTAGATTTCGCGATAGCCGATGTCCTATTCCGCA
ACACGCTCCAAAAGAAACCGGGTGCTCATCAGAAACCGCACTGCGCTGAG
GAATGACCTCATCATCTTTCAAATTTCCATCTGTTACTTGGTTCAGAGCT
TGCCTCACGACCGGATGTTGTGCATTTCCTTCGAATGGAAATCGGATGGG
ATATAAGACTTGATACCCCATGTAAAGGTTTAGACCGACAAAAGAAGCAC
TAGCCATTGC back to topCoding sequence (CDS) from alignment at CM002459.1:160256..163965+ >rna2346 ID=rna2346|Name=rna2346|organism=Nannochloropsis gaditana|type=CDS|length=2205bp|location=Sequence derived from alignment at CM002459.1:160256..163965+ (Nannochloropsis gaditana)
ATGCAGCACAGGCCTGTTGAACTCTTGACAACGTGCTCTtttcgctcccg
cccctcgtgTTCGCACGGGGCGCCTCCTGTTCTTGGACCTCTCTCTTCGT
CGCGGTGCAAGAACAACGCCTCCCCTGAGCACGACGGATCGTCTAGGTTT
CTTGGTCAGAAGACTGACGAAGCAAAGGCAATTTTGTCATCCCACAACAT
GGAAGATGACGTAATCAAGATGAGCGGGGTTGGCTCAAGGCGGCACTCTC
AAGACATTCCTGGAGGTTTACCCGCCCTGAGAGCCGATCGAACAGCGGAG
CAGCTCGCAGAAAACAACAAGATGCCAACCAGCATTGCCATTCACATGAT
ACAAAGGGAAAATAGTCCTTGTACTGGAGAAAACAAAGAGGACGTCATGG
ATACCAAGGTGGCGGTAAACCAGGCACGGACCGAGGACCTTCAAGTGACC
TCCCCGTCCGTCATCGCCGCGTGCATGCGTCGATTTCGGAAGCAACCTCC
CATGTCGCGACAAGAGAGAGACGAGTAccgacagcagcaggaacGTCTGG
CGGCAAAGAGCCGCGCAGCGGATAATGAGCTTTTGggaacaaaggaggaa
gatttTTGGTGGATACGACCGCCTCAGGCGGCCTCTGTGTGTCGAGGTCT
GAGGGAGGTCGAATCTTCCCGGCATGGTTTCTATGTCTCTGAGAAGATTG
AAGGTCGATCCAGCGTACAGACGACGGAAGTGCAGGatttggaaaaggag
gcggacgtCCTCCTGAGGCGGAGTCAGGAATTGCTTGGGAgtaccccttc
cttttcctcctcctcctcctcctctcccccgctgtCGGCGACAGCCCTGG
TAATGGAAGACGAcctggtcctcccctcctggcaAAGCAACGCAGGAGAG
GCGGGCTACCCGGACTGCGGAAGACAAGGTGTCGAGGCCTcggcgcgggg
aggggaaggagcgatCGCCCAAATCGATCCGTCGACCTCCGTCGGCCTTG
CAGCCCAAGACGACCTGTTGGTGGAGCACGGTCAagcctcgtcccctccc
gccttgcccttcgTTTCCCGGAACGTCGGCGGGCGGCCtctgtccccgcc
cctcgtctccccccttcccgcctccaccccccgagtccaggaaggggaag
tcgtccggccgccctcccctctcccgccaaccctctccatctccataCAC
AGCATCGAGGCGATCCAGGAGGAGACGTTGCCCACCTTTTATCGGCAGCA
AGTCCAGGCGATGGACGCGTTGGAACGTCGGCGGGCTCTGCGACGAGCCT
GGCGGTCACGGGCGCCCCTGGCCGGTGCCGGAGGCGCCGCGGTTGGCCCG
GGGATGAGGTTACAGCCACAGGGAACCAGGAGCGGACCGATGGAAAGGAC
GGAGCAGACCTTGTGGCTTGCTTCGgcgtccgccccctccgccaccgtct
GCCAGCCAGCCTTGGGCAAAGACCTTACTTCTCACCGCCCTGGTTGGGCA
TGCGGGGGTGGCCGGGGTTGCTGCGACAACAAGGAGGGCTGCGACATTCT
cgtgacctccctccccatgtcctactctcctccctcgtcctccccccccc
ccctcttcccatccttctcctctggGTGGCGCGATCGACTGCCAGGTTCG
ATCCACCTCGCTTCCTATCCAGCCCACTCATCttgcctccccgcctccca
tcGACAGCATCTGCCCAACGAAGCCATGAGGCTTGTCAAGCATTTGGCAG
GAGAAGTTGTGCACACCCGCCTGTTTGCcagtccccatcccctcttgTCC
CCTCAGGCGGACCCGCCACATGTGGTAGGGCAGCGTGTGCGGGGGGCACT
CAGGGAAATGGAGACGGAcggcggggacgaagagaagaaaaaagggacag
ACATGACCGAAGACGAGGGTgggcaagaggagaaggacgaaggagccAGC
AAtaggggcgggaagcaggaTAATTTCTACAGGCACACggcgccgtcctc
gtccgaaAGTGTGGACAGCTTAgccttggaagaggaaggggaagcaagcC
TATGGTGGGATGTAGAAGACGAAGCAACGtgcggggagggcatgggggag
gaggtttcCGAGTACAGGGACGACGCGATTGTGCAGGCCTTGGTGGCAAG
GCGACGGGAACTCCTGCTCGAGTTATCGTTGGGAGAAAGGGGCCGGCTGG
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