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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100846g3.7644.mrna |
| Orig protein id | gnl|cribi|Naga_100846g3.7644 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002459.1 | supercontig | CM002459.1:135417..137649 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2336 ID=rna2336|Name=rna2336|organism=Nannochloropsis gaditana|type=mRNA|length=2202bp
CCAGCGCTCATAGCACGTTAAACTGTAGATTTACATGTATCAAGATTTTT
TAAGCGGTCAGATGAGTCCGCAACGGGCTAAAAAGAGAGGCATAGGCGGG
ACAGGTGGTCAAGGCCGCAGAAGCAGGAACGAACGTGTGACAAGTTGAAC
TTCAACATGGGGAGGATAAATAAACTAGGACAGACTTTGATAACAGTGTG
CCTGCAAACACAACACCCCACGTCAACGGCTGTAGCGTTGTTGTCTACAT
GCGTATGATGAGCTTGGGTGTCGAATTCTTCATGTGCCCCCATGCACTGA
GGACCGCTTGGTCAAGTTACCGGGAGTTCTCGGAAGGAGGAACGAAGGAA
ACTGTGACGCGGAAAAGTCACGCTGCCACCATTGACCCGATTTAAACGCA
ACCAGTATCTCTCTGTGCACTCATTCTGGAAGCATTTATATACGGTGAAC
ACTATGTTAAATTCGGAGGGGCTCACTTTTGCACACAAACAAAAAAGCGA
TTTCGGCTGAGCAGGATTGCTCGCACTTATTGCAATCGTTACGGGACGCA
GGAAGCTTCAAAAGCTCAAAAGCATATAAGATGGCTTTATCAATTTTTAT
TTGCTTCTATGAGTAATAAAGGACAGTTCGAGCCCTATAAAAGTCTTCTC
CTTGAGGTATATGTAGGTTCATGGCATTGGTTTCCTGGTCTGGCCTCTCC
TTTTCCAGCAGAACCAGGCTAACTTGAATAAAATTTGAAGTGATAGATGA
AATGATTAAGCCAGGCCTCAGTAAAAAAACAAGTCTGGTATGAGCTCTGT
CTGGGAGAAGTAATGAATGTGTATCTGTACAGCTTTCGGGTGTTCTATCC
TCCTACTATGGTGCGCAATGCTCACGTCCCGCTGCAATACATTCTGTATC
ATGAATCAGATGACGCGATCGATCATGCCTATGCTTCAACCATCTCAAAT
TTACAATGACTTCCCTTTTTTCCCACTGTTGCACAGGGACTTTTCATGCT
AGTATCCTCCACGCATGCCTCGCCCAGCCCATGTGCACACAGTCAAGGCC
ACTTTGCGGGGAGGAGACCAAGAACAAGCATATTATGCCACCTTTTCATA
TCTTTTTTCCTCGTGCTACTGCCATTCATGGTGCAAGGCTTTCTCCAAGT
ACCACACCAGCCCTCCATGGCGCAGGCGGGCCCCCCTCACCCCCTCGGCC
CATCCCGCGCGCTCTCACCGGCCTTTTGCCAAGCGTGCTTCCATGAACAT
AATCATAAGGATGGTGGCCGCAAAACACGAAGACCAGGAATGCCCGTGCT
ACATTTTCGCGGATCGTGTGGATGTAATGCCGCCCTCCAGCCCGTACTGA
ATGCGTTGGGTCCGTATTTCCCCCATACTGATGAAGACACGCCCGACAGA
GAAGGGAGCCTGGACGTGCCTGAGGCAGTCGATGAGTCATTCGACGAAGT
AGAAGAAGTTCTCGCCCCCACCGACGCCAGTTCTGCCATTTTGATCAATT
TTTTCCGGGGATACAAACGGTACATCTCCCCCCTTCTCCCGCAGGCCTGC
CGCTTCTTCCCCACGTGCAGTGAGTACGCGATAGAGTCGGTCCAGAAGTT
CGGGCCTGCGAAAGGGGCGGTGCTGACCGCCTGGCGGCTCCTGCGATGCA
ATCCGTTGGGGGGGAGAGGCTGGGATCCTCCACAATGGCCGCCGCCGGGG
TGGAAGGCGGGAGGGACGGGGAGGTAGGGAGGGAGGTATGGAGGCAGGAA
GGGAGGGAGGGAGGGAGGGAAGGGAAGAGTACGGCTTCGTGTAAGAAACG
ATGTGCGCGGATTGCGGCGAAGCAAAAGGCTATGCCCTACGCACCCCTTT
GGGATTTCATCAGGAGGTCTCCCGGCCCAGGGTGGGGGTCCAAGGCGTCA
TAGCAAGGGCACGTCCACCTCCAGGACATGGTGGACCTAGGAATGCCAGG
TTTCGCCTGTAAGAACGCCTCTGTCCTTTCCCTTGCCGTTCGACGGATTG
CTGCTGCTATTGTGTCGTTTGAGCCATCTGAATATAAATCACGGCTGCCC
GCCCTTTCCAGAAGTCTCGGTAAATTAGGCACCAAGAGCTTATGCGCATT
GCCCTTGGTAGCACATGGGCCAAATTTTGAAAAAAGCGATACACAAGCCA
TCGGGCCCCACGAGGGTTGGGAAAATAAAAAAGATTGTCTTTCGTCGGTA
CC back to topprotein sequence of rna2336 >rna2336-protein ID=rna2336-protein|Name=rna2336|organism=Nannochloropsis gaditana|type=polypeptide|length=207bp
MSAGINTSACRPPSFPELPSTTSGFPRANVGRRVKHVTANYPCESYDKRT
KQYAVSSHNPLEWTRKGQSFWLRWILHLGACIHFLMQTLRLFQHAQLCPG
FQAAFSGAPIEEEALKILSRDLPVLLVIYLIVAVKAADLLNMAFAIWVLL
IRPNVHMPIMTLGWRIHLLLFIFSGFCGPCLASDLPFWRLLSAHSVYNIV
LLLVLPL back to topmRNA from alignment at CM002459.1:135417..137649+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2336 ID=rna2336|Name=rna2336|organism=Nannochloropsis gaditana|type=mRNA|length=2233bp|location=Sequence derived from alignment at CM002459.1:135417..137649+ (Nannochloropsis gaditana)
CGATTGCAATAAGTGCGAGCAATCCTGCTCAGCCGAAATCGCTTTTTTGT
TTGTGTGCAAAAGTGAGCCCCTCCGAATTTAACATAGTGTTCACCGTATA
TAAATGCTTCCAGAATGAGTGCACAGAGAGATACTGGTTGCGTTTAAATC
GGGTCAATGGTGGCAGCGTGACTTTTCCGCGTCACAGTTTCCttcgttcc
tccttccgAGAACTCCCGGTAACTTGACCAAGCGGTCCTCAGTGCATGGG
GGCACATGAAGAATTCGACACCCAAGCTCATCATACGCATGTAGACAACA
ACGCTACAGCCGTTGACGTGGGGTGTTGTGTTTGCAGGCACACTGTTATC
AAAGTCTGTCCTAGTTTATTTATCCTCCCCATGTTGAAGTTCAACTTGTC
ACACGTTCGTTCCTGCTTCTGCGGCCTTGACCACCTGTCCCGCCTATGCC
TCTCTTTTTAGCCCGTTGCGGACTCATCTGACCGCTTAAAAAATCTTGAT
ACATGTAAATCTACAGTTTAACGTGCTATGAGCGCTGGTATCAATACAAG
CGCCTGCCggcctccttcttttccagaGCTGCCCTCTACCACCTCCGGCT
TTCCTCGCGCAAACGTTGGGAGACGGGTCAAACATGTGACAGCGAATTAT
CCATGTGAATCCTACGATAAACGTACGAAGCAGTATGCTGTATCCAGTCA
CAATCCTCTTGAATGGACCCGTAAAGGGCAGTCTTTTTGGCTTCGCTGGA
TCTTGCATCTTGGTGCCTGCATACATTTCCTAATGCAAACCCTCAGGCTA
TTCCAGCATGCGCAGTTGTGCCCCGGTTTTCAGGCTGCCTTTAGCGGTGC
TCCCatagaggaagaagccctgAAGATATTAAGTCGTGACCTCCCTGTTC
TACTGGTAATTTATCTCATCGTTGCCGTCAAAGCTGCAGACTTGCTCAAC
ATGGCTTTTGCCATCTGGGTTCTTCTAATTCGTCCCAATGTACACATGCC
GATTATGACGCTGGGATGGCGCATCCACTTGCTCTTGTTTATATTTTCAG
GCTTTTGTGGGCCCTGTCTGGCTTCTGATCTTCCTTTCTGGAGGTTGCTC
TCTGCGCACTCAGTATACAAtatcgtccttctccttgtcctccccctcta
aAACTCACGTTGAGACAAGCTGTAAGCAGGGGTTCAAAAACTTGCGTCGA
CAACTTTGTGAACAAGAAGAGAATTGAGAAGTAAAATAAGGTACATGTAG
GGTGGAAAACGGTTGGCTAAGATTTAGACGAGAGGAGAAACGCATGAGTA
AGGATGACGGGTCGGTGTTACCTACAAATGTCACCCGGAGTTGGCGAAAC
ATGTTGAAGAAGCGTCCTAACAATGGCTCTTATTTCCACAAATGCCATTA
CACGATCAACGCAATCTCTCGAATTTCCGCTACTTTCTCGGTCAAAGGCT
CGCTGACCCGTCCTATCCCAAAGTCCTGGTTGTTGCCTTATCCCCTCTCc
tatttcctcctctgcgcccTTTTCTGATGTGATCgttccctccgcccatc
ATGCCTGTCGTTCCAAGGCACAAGTCGCAGCCATTCCTcgcctgcttttc
ctccctctccttcgcgtcTCACCCGCGCAACAtactcttcttcccccctt
cccctccctcccctccctcccgtccctcttcctcctcctcccagggtgcc
acccctctttcctcctcactcacGTCGTCCCGATACATTTGCCACAAACC
GAAGACGCTTAAAGGGGTGAAAGGCGCCCACCCAATCACGAAACCTTGCA
TGTAGTACAAAGAGCGCTCCTCCGTCAGTAGAGTAGGGTAACTCCGGCGG
CCGTTCCAACTCAAAAACGATTCCCGCCCGAAGCGAAAGACGTTGCTGCG
CGCGTCAAACGTCCACTCCCCCTTGTTTCCCCCATTGACCCAAATGACGC
GACCGTCCTCCCGAAAGAATACCCGGGTCCGTTGCACGCGTTTCAACGGA
TTCCAACCGTCCGAAACGGTCCCCAACGTCCAGGTCGTGTTCACAAACTG
CTCCCGGCGGAAGACGGGAAGCTCGGCGTCTTCCGGGGGGTCCCCGGAGG
GCAAAAAAGGTAAGTCCggcgcttcttctccttcccgttgGTAGTACCCG
AAGATGGACCGACGTTTACCCGCCTCCGCCGGGTCGAAAGATGTGCCTTC
GACCAGCTGTAGGTATTTTTGTTCCCACCAAGC back to topCoding sequence (CDS) from alignment at CM002459.1:135417..137649+ >rna2336 ID=rna2336|Name=rna2336|organism=Nannochloropsis gaditana|type=CDS|length=624bp|location=Sequence derived from alignment at CM002459.1:135417..137649+ (Nannochloropsis gaditana)
ATGAGCGCTGGTATCAATACAAGCGCCTGCCggcctccttcttttccaga
GCTGCCCTCTACCACCTCCGGCTTTCCTCGCGCAAACGTTGGGAGACGGG
TCAAACATGTGACAGCGAATTATCCATGTGAATCCTACGATAAACGTACG
AAGCAGTATGCTGTATCCAGTCACAATCCTCTTGAATGGACCCGTAAAGG
GCAGTCTTTTTGGCTTCGCTGGATCTTGCATCTTGGTGCCTGCATACATT
TCCTAATGCAAACCCTCAGGCTATTCCAGCATGCGCAGTTGTGCCCCGGT
TTTCAGGCTGCCTTTAGCGGTGCTCCCatagaggaagaagccctgAAGAT
ATTAAGTCGTGACCTCCCTGTTCTACTGGTAATTTATCTCATCGTTGCCG
TCAAAGCTGCAGACTTGCTCAACATGGCTTTTGCCATCTGGGTTCTTCTA
ATTCGTCCCAATGTACACATGCCGATTATGACGCTGGGATGGCGCATCCA
CTTGCTCTTGTTTATATTTTCAGGCTTTTGTGGGCCCTGTCTGGCTTCTG
ATCTTCCTTTCTGGAGGTTGCTCTCTGCGCACTCAGTATACAAtatcgtc
cttctccttgtcctccccctctaa back to top
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