rna2330, rna2330 (mRNA) Nannochloropsis gaditana

Overview
Namerna2330
Unique Namerna2330
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length255
Alignment locationCM002459.1:121001..121380 +

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101768g1.6828.mrna
Orig protein idgnl|cribi|Naga_101768g1.6828
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:121001..121380 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101768g1gene2225Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna2330rna2330-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM28351.1cds2322Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna2330 ID=rna2330|Name=rna2330|organism=Nannochloropsis gaditana|type=mRNA|length=255bp
ATGGGATGGGAAGGAGCTGTATCATGGGGGAAAAAAGAAGTCAATGAACA
TGAATTGGGGGCACAAAAGCCCCAGAGTTCACAGGGGGAGGAGCCAGCCT
TGGGCGGGCAAGGAAATAAATCGTTGGCCTTCCTAGAAGAAAGCAAAACG
CGAAATGTTGGAAATGCGATTCATCGTGTCTTCCTCTTAAAAGGAGGACG
GGGCGGTCCGCAAGCACGAAACGAATGGAGGGAGGGCGGCATGAAAAAGC
CATGA
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protein sequence of rna2330

>rna2330-protein ID=rna2330-protein|Name=rna2330|organism=Nannochloropsis gaditana|type=polypeptide|length=82bp
MRGLKSDGNARRPRGRKRTGGRAGDKREDEAGSLVQKDKNCAKPGGTRTR
LTGNSPLPTVVRQTWKDEKIHRRRRNGGQKRE
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mRNA from alignment at CM002459.1:121001..121380+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna2330 ID=rna2330|Name=rna2330|organism=Nannochloropsis gaditana|type=mRNA|length=380bp|location=Sequence derived from alignment at CM002459.1:121001..121380+ (Nannochloropsis gaditana)
ATGCGAGGCCTGAAAAGTGATGGGAACGCAAGACGTCcacgtgggaggaa
gagaacaggaggcagggcgggcgaCAAGAGAGAAGACGAAGCAGGCAGCC
TTGTGCAAAAGGataaaaattgcgcgaaaccgggggggacaaggacaaga
cTGAGTTGAGcgtgaagaggagaaagcttTCATTGGTAACggcaggggaa
aaaaaataaaattcATAAACCAACGGCAAATGCGGTCGGCGGGTACGGGC
GAGAGCGGCACAAAGTAGATGCTGGTGTCGACAAGCTGGGAATTCCCCAC
TGCCAACTGTTGTAAGACAAACTTGGAAAGATGAAAAGATACATAGGAGA
CGCAGGAATGGAGGCCAAAAAAGGGAATAA
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Coding sequence (CDS) from alignment at CM002459.1:121001..121380+

>rna2330 ID=rna2330|Name=rna2330|organism=Nannochloropsis gaditana|type=CDS|length=498bp|location=Sequence derived from alignment at CM002459.1:121001..121380+ (Nannochloropsis gaditana)
ATGCGAGGCCTGAAAAGTGATGGGAACGCAAGACGTCcacgtgggaggaa
gagaacaggaggcagggcgggcgaCAAGAGAGAAGACGAAGCAGGCAGCC
TTGTGCAAAAGGataaaaattgcgcgaaaccgggggggacaaggacaaga
cTGACTGGGAATTCCCCACTGCCAACTGTTGTAAGACAAACTTGGAAAGA
TGAAAAGATACATAGGAGACGCAGGAATGGAGGCCAAAAAAGGGAATAAA
TGCGAGGCCTGAAAAGTGATGGGAACGCAAGACGTCcacgtgggaggaag
agaacaggaggcagggcgggcgaCAAGAGAGAAGACGAAGCAGGCAGCCT
TGTGCAAAAGGataaaaattgcgcgaaaccgggggggacaaggacaagac
TGACTGGGAATTCCCCACTGCCAACTGTTGTAAGACAAACTTGGAAAGAT
GAAAAGATACATAGGAGACGCAGGAATGGAGGCCAAAAAAGGGAATAA
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Synonyms
Publications