rna2329, rna2329 (mRNA) Nannochloropsis gaditana

Overview
Namerna2329
Unique Namerna2329
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1714
Alignment locationCM002459.1:120653..120960 +

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101768g2.6829.mrna
Orig protein idgnl|cribi|Naga_101768g2.6829
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:120653..120960 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101768g2gene2224Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna2329rna2329-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM28352.1cds2321Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna2329 ID=rna2329|Name=rna2329|organism=Nannochloropsis gaditana|type=mRNA|length=1714bp
GCAAGCCTTTTACTGCCGCCGCCGAAGCGGATACCTCGACGTTCCGTCTT
GGCACACATTAAGCACCATTTCTTCCCTCCATTACGACAGGACAACATAG
AGCAACAACATCACCTGCTTTTCCTTCCTCTGCTGGGGCGTCGACAGCAT
TGGAAGGAGAAAGCACACAGCTTCAAGTTGTGTCGCCTACGCTGCCACGG
CTATGGCCATGTGGCCCTCCTTTCTAACCAACCAGGGCAAGACTTCCCGC
TCCGTCTCCCCCTCCATCTCGGACGACAAAGGCCCTCTGTCCTTAGACAT
TACACCGGACGACTTCGAGACCGACCACGTACCGAGGAAGCACAAAGTGC
ATACAATGGGACCGACTTCCCGCAACGATTCCTTCATGACCTACGGCCTA
TCCGCCGAAGACGACTCCAACCTCGACATCCTGGCTGCGCAATTGACTTT
ACAAGCCCACGAAGCCAAGGCTTTGGCCGCGGCGTCCGCCGCGTACCTCA
AGGCCCCACGTCCCTTGTTGAGCACCCCCTGTCGCAGGGGAAGCTGGCGC
GAGACGAGTTTGTATAGCGGGGATGTGAAACATGCCCCCAAGCGCAGTTA
TTTTGGAAAGGACTTGGAGCAGGGCGGGAAGAAAATGGGCAGTCTGGCCG
CGCACCTGGGCCTGTGGAGCAAGGATGGGAGCGGTGCGCTCGAGATGAAC
GGGAAGAGTCCTCCCCACGGCCTGGAGATGTTGAGTCAAGTGAGTGGGAT
CCAACAGACACCGATCCAAACCATCACCTACATGAAGGACGGAAGCAAGC
GCGTGGACGACCTGGGCCTGAAAGACGTGCTTCGGTACATTCAAAGCGCA
GTGCGGAGCGTGCACGCCAAGGAACAGGAGATGTTTGCCCTGCAACGGGG
GGAGAGCCTGGCGTCTTCCACGTCTGCCTACACCCCCTCCATCACGACCT
CGCCCGCTTCCTCCGCCCCCCCGGCCCTTTACTTTGCCCGTGGGCACGAC
TTTCCCAACGGTCACGAGCATGCCCAGCTTGCTCCTGCTCCTGGGAAAAA
CGCTTGGGGGAGTGGGAGCAGCAACTCGGTTCCTTATACGGTTCCACCGC
CCTACGGAGAAGCTCGCGCGCGGAGTGCGGAAGAATTGCGATTCCGTTCC
GATCCTTCCCATACCATGGACACCGGAGGCTTGCACCGGACCGCCACGGG
GCGGGCGAGACGCTCTTCGCAGCGGTTGCCGCCCGAGGGTCCCTTCCCTC
GCTGTACCCCGACCTCGTACACGTCCTGTGGGAGCGTGGGCGTCGGGGGG
GGAATGGGGCCTGGAGGGATGCCTGGGGGGGGGGGCGGGCGGGGGGGGAG
GGCCGGGGGGAATGCTGAACGCCCGGGACATCCGCCGGTTGTGTACCGGC
TTGGATTCGGAGGCGGCGCGGAAGAAGGAGATGTCCATCGCGGTGCGGAA
ACACACGGTGATTTTGAACCTGGACGAGCTCAGATGTTTGGTCTTTTGGG
ACCGGCTCATTGTCTTGGTCCCGGAGGGAGCGGACCCCGAGTGCCACGGG
CGCCTGGAGGCGAATTTGAACTGGCTGCGGCTGCAGAAGAAGGCGTTCGC
AGTGGGGGAAGGGGGAGGGAAAAGGGGGGAAGGAGGGGCGGAGGGAGTAA
TGGAGGGAGGGGCGGAGGAGGAGGAAGAGGGTTTCGAGTTCGTGGCGCTG
GAGGTAGGTCGTTG
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protein sequence of rna2329

>rna2329-protein ID=rna2329-protein|Name=rna2329|organism=Nannochloropsis gaditana|type=polypeptide|length=84bp
MGWEGAVSWGKKEVNEHELGAQKPQSSQGEEPALGGQGNKSLAFLEESKT
RNVGNAIHRVFLLKGGRGGPQARNEWREGGMKKP
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mRNA from alignment at CM002459.1:120653..120960+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna2329 ID=rna2329|Name=rna2329|organism=Nannochloropsis gaditana|type=mRNA|length=308bp|location=Sequence derived from alignment at CM002459.1:120653..120960+ (Nannochloropsis gaditana)
atgggatgggaaggagctGTATCatgggggaaaaaagaagtcAATGAACA
TGAATTGGGGGCACAAAAGCCCCAGAGTtcacagggggaggagccagcCT
TGGGCGGGCAAGGGTGAGAATTCGTCAGTGGCAAGGCCAGTTCGAATGAG
ACATATATGTGCCTAGAAATAAATCGTTGGCCTTCCTAGAAGAAAGCAAA
ACGCGAAATGTTGGAAATGCGATTCATCGTGTCTTCCTCTtaaaaggagg
acggggcggtcCGCAAGCACGAAacgaatggagggagggcggcatgAAAA
AGCCATGA
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Coding sequence (CDS) from alignment at CM002459.1:120653..120960+

>rna2329 ID=rna2329|Name=rna2329|organism=Nannochloropsis gaditana|type=CDS|length=510bp|location=Sequence derived from alignment at CM002459.1:120653..120960+ (Nannochloropsis gaditana)
atgggatgggaaggagctGTATCatgggggaaaaaagaagtcAATGAACA
TGAATTGGGGGCACAAAAGCCCCAGAGTtcacagggggaggagccagcCT
TGGGCGGGCAAGGAAATAAATCGTTGGCCTTCCTAGAAGAAAGCAAAACG
CGAAATGTTGGAAATGCGATTCATCGTGTCTTCCTCTtaaaaggaggacg
gggcggtcCGCAAGCACGAAacgaatggagggagggcggcatgAAAAAGC
CATGAatgggatgggaaggagctGTATCatgggggaaaaaagaagtcAAT
GAACATGAATTGGGGGCACAAAAGCCCCAGAGTtcacagggggaggagcc
agcCTTGGGCGGGCAAGGAAATAAATCGTTGGCCTTCCTAGAAGAAAGCA
AAACGCGAAATGTTGGAAATGCGATTCATCGTGTCTTCCTCTtaaaagga
ggacggggcggtcCGCAAGCACGAAacgaatggagggagggcggcatgAA
AAAGCCATGA
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Synonyms
Publications