rna2317, rna2317 (mRNA) Nannochloropsis gaditana

Overview
Namerna2317
Unique Namerna2317
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length453
Alignment locationCM002459.1:99766..101032 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101258g3.4086.mrna
Orig protein idgnl|cribi|Naga_101258g3.4086
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:99766..101032 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101258g3gene2212Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM28364.1cds2309Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna2317rna2317-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna2317 ID=rna2317|Name=rna2317|organism=Nannochloropsis gaditana|type=mRNA|length=453bp
ATGAAACAAATTGGAGCTCGACCACCATGTATTACCATCCACACCCACAA
AGATCATCCATCCCTGCACAGTCGGGTCACGGGAAGACTCGCGTGGTCTT
GATGAGTAAGCAAAGCGAGATATGAAGGGGTGTCGCCGTTCCATCTCGTG
CCGGGCGTGGGACGCGGCGCCGTGATGGATAAAAACAGGTCCAACGCGTA
CAATTTTCGAAAGCAGCATGAGACGCGGTGTGACGAGGTCACCGAACGCC
TCCAGCCAGGGAAAGGGCTATCGTCAGACGTTGGGGTTTTACTGGCACCA
AACATAGTAAGAATTGTTCCAGAGGTTGCATCACCCGCGCTGTCAGGGAG
GTCGCTCATTCCCCCTGTCAATGAGGCACAAAAACGAGAACCATTTCTCC
AAAAGAAGGAATCAAATATATGTGTATCCATCAAGTGGCGACTTCCCTGG
TGA
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protein sequence of rna2317

>rna2317-protein ID=rna2317-protein|Name=rna2317|organism=Nannochloropsis gaditana|type=polypeptide|length=331bp
PSLPPSLPPSLLLPPPIAPTEAIAGAAIPSPFATLRKPASRLRMGGEEVG
VEPPAAKEGGEGRGRGFMPGGFERADSPRRPFPSLPLSSSLPSMREGEEE
EENGEGGVGLLRSLQRRKIAVENLPVTRPWREGRRGRAVREGEGHAHVEL
WSRLREEEEEEDEKEEEEEEEEEEEEEEEGAWIRSITQRFRNREGGSSLL
RPPSRRPRVHLASSLPSSASASAPASSPPTASSLLGIDRSLGGREDEEEE
GGDGEERVVLDDVVSRLLGRGRGLLSLGGPASMPWPRPVWPGGASSSSYG
TDYPVLLRAEGGEGYEASYAFHRIKKELPPQ
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mRNA from alignment at CM002459.1:99766..101032-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna2317 ID=rna2317|Name=rna2317|organism=Nannochloropsis gaditana|type=mRNA|length=1267bp|location=Sequence derived from alignment at CM002459.1:99766..101032- (Nannochloropsis gaditana)
CCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCTCCTCCCCCCGCCAAT
CGCCCCCACCGAAGCTATTGCCGGTGCGGCCATTCCGTCACCTTTCGCTA
CCTTAAGGAAGCCCGCGTCGAGGCTGAGGATGGGAGGGGAGGAAGTGGGG
GTGGAACCTCCTGCTGCGAAGGAGGGAGGAGAGGGGAGGGGGAGAGGGTT
CATGCCCGGAGGGTTTGAGAGGGCTGACTCGCCCCGCCGTCCCTTTCCCT
CCCTTCCTCTCTCATCCTCCTTACCTTCCATGCGAGAAGGGGAGGAAGAG
GAGGAGAACGGTGAAGGGGGGGTCGGTTTGTTAAGGAGTCTTCAACGGCG
GAAGATCGCGGTGGAGAATTTGCCTGTCACGCGTCCGTGGCGGGAAGGAA
GAAGGGGAAGGGCGGTTCGGGAAGGGGAGGGCCACGCGCATGTGGAATTG
TGGTCCCGGTTGAGGGAGGAGGAGGAGGAGGAGGACGAGAAGGAGGAAGA
GGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGAGCCTGGATAC
GAAGCATAACGCAGCGGTTCAGGAACCGGGAGGGAGGTAGCTCCTTGCTG
CGACCTCCGTCGCGTCGCCCCCGCGTCCATCTTGCGTCCTCCCTCCCTTC
CTCCGCTTCTGCCTCCGCCCCTGCCTCCTCCCCCCCTACCGCTTCCTCCC
TCTTGGGCATCGACCGCAGCCTGGGAGGGAGGGAGGACGAGGAGGAGGAG
GGGGGGGATGGGGAGGAGAGGGTGGTGCTGGATGATGTGGTGTCGAGGCT
GTTGGGTCGAGGTCGAGGCTTGTTGAGCTTAGGAGGGCCGGCGTCCATGC
CCTGGCCTCGCCCTGTATGGCCAGGCGGGGCTTCCTCCTCTTCGTACGGG
ACAGATTACCCCGTGCTGCTGCGAGCAGAGGGAGGGGAAGGTTACGAGGC
GTCTTATGCCTTTCATCGAATAAAGAAGGAGTTACCCCCGCAGTAGGTGG
TGTTGGCGGACGAGAGTGTCTGGGAAGCACGGTCTCGGAGGCGGGGGACA
GGACGTGGGGCGGAGGTTCGGAGCAGTAGTGTATGTATGTGGGGAGAGAA
GGAAAAAGGCGTGGATGTAGAAGATATACGAGGAAGTAGATGTTAGTGTG
CATGCTCTCATCGAAGTGTAGGGTCAGGAGGAGGAGGATGGTAGTGAAGA
AAGCTGCGGATGGACGAGTAGAAAAGCAAAGAAGAGCCGGACTCGTCACC
AGGGAAGTCGCCACTTG
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Coding sequence (CDS) from alignment at CM002459.1:99766..101032-

>rna2317 ID=rna2317|Name=rna2317|organism=Nannochloropsis gaditana|type=CDS|length=996bp|location=Sequence derived from alignment at CM002459.1:99766..101032- (Nannochloropsis gaditana)
CCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCTCCTCCCCCCGCCAAT
CGCCCCCACCGAAGCTATTGCCGGTGCGGCCATTCCGTCACCTTTCGCTA
CCTTAAGGAAGCCCGCGTCGAGGCTGAGGATGGGAGGGGAGGAAGTGGGG
GTGGAACCTCCTGCTGCGAAGGAGGGAGGAGAGGGGAGGGGGAGAGGGTT
CATGCCCGGAGGGTTTGAGAGGGCTGACTCGCCCCGCCGTCCCTTTCCCT
CCCTTCCTCTCTCATCCTCCTTACCTTCCATGCGAGAAGGGGAGGAAGAG
GAGGAGAACGGTGAAGGGGGGGTCGGTTTGTTAAGGAGTCTTCAACGGCG
GAAGATCGCGGTGGAGAATTTGCCTGTCACGCGTCCGTGGCGGGAAGGAA
GAAGGGGAAGGGCGGTTCGGGAAGGGGAGGGCCACGCGCATGTGGAATTG
TGGTCCCGGTTGAGGGAGGAGGAGGAGGAGGAGGACGAGAAGGAGGAAGA
GGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGAGCCTGGATAC
GAAGCATAACGCAGCGGTTCAGGAACCGGGAGGGAGGTAGCTCCTTGCTG
CGACCTCCGTCGCGTCGCCCCCGCGTCCATCTTGCGTCCTCCCTCCCTTC
CTCCGCTTCTGCCTCCGCCCCTGCCTCCTCCCCCCCTACCGCTTCCTCCC
TCTTGGGCATCGACCGCAGCCTGGGAGGGAGGGAGGACGAGGAGGAGGAG
GGGGGGGATGGGGAGGAGAGGGTGGTGCTGGATGATGTGGTGTCGAGGCT
GTTGGGTCGAGGTCGAGGCTTGTTGAGCTTAGGAGGGCCGGCGTCCATGC
CCTGGCCTCGCCCTGTATGGCCAGGCGGGGCTTCCTCCTCTTCGTACGGG
ACAGATTACCCCGTGCTGCTGCGAGCAGAGGGAGGGGAAGGTTACGAGGC
GTCTTATGCCTTTCATCGAATAAAGAAGGAGTTACCCCCGCAGTAG
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Synonyms
Publications