rna2315, rna2315 (mRNA) Nannochloropsis gaditana

Overview
Namerna2315
Unique Namerna2315
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1341
Alignment locationCM002459.1:98093..99197 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101258g1.4088.mrna
Orig protein idgnl|cribi|Naga_101258g1.4088
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:98093..99197 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101258g1gene2210Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna2315rna2315-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM28366.1cds2307Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna2315 ID=rna2315|Name=rna2315|organism=Nannochloropsis gaditana|type=mRNA|length=1341bp
GGGAGAAAGAGGGGGAAAGGCCGCAGACGCCATTACTGACTTCTGGAGCA
TGTGACAGGGAGCTTTATGACGAGATTGGCGAGCGTCTGACCAAGGAAGA
CTGGGAGCGGTAAGCCAATCCTCCCTCCCTCCCTCCTTCCTTCCCTCCTT
CCTTCCCTGCTTCCCTCCTTCCTTCCCTCCCTCCCTCCAACCATGTCTTC
TTCACCATGCGGGCCATGGCCATTCACAAAGAAAAGAGCAGGCTCAACCT
TTCTAATTTCCTTCCCGCTCATGCCTTGCCCCCCCTTCCCCCCCTCCCAC
CCTCCTTCCCTCCTGCCCTGGCAGCTACGACATATTGGAAGGCGACTTCA
TGGGGGACGAGGAGGCGGTGATGACCATGAAAATCGAAGAGAACACCAAG
CGGAACAAGGACTACTTGCGACAGACCTTGATCGCCCCTCCCCGGCGCAA
AGCCACCCTGATCGTGGAAACGGAAGACATCGAGAGCTACCGAACTGCCC
TTTTGGAGTCTTCGACGGGGAGGAAAGGGGCTCTGCCTGCCCCAGCCTCG
GAGGCGCAGGAGGACGGTGCGGGGGTGGTGGAGGTGGAGGAGGGCGGGAA
GGAGGAAGAGGTAGTGGCGGCGGTAGCAGCACCAGCTAAGAGGGGAAGGA
AGCGCAAGGCAACTGCGGGGGAGGGCGAGGAGGATTGAGGAAAAGGAGGA
AGGTTGGGGGGGGGAGCACGACACTGTAAAATTTGAAAAAAAAAAGGGTG
GGGAAAAGGGAGGGGAACGCGAAGGGGAGAACGAGGGAAGATGTGAGGCT
GTACAGGGTCATCCAGCGCGCAAACAGGACCATTGGATCGACGGGCGGGA
GGACGGGCGGGAGGCATGGCGAAAAAGAGAGGGGGGGCGGGGGGAGGAGC
ACAAGAAGGTATACGAGGCGTGATATTTGAGTAGAGGAAGGAGGACAGAG
CGTGGATCCGAGGAAAAGGATAGAGAGGTAACGATGACGCCCTAAACCAT
GTGGAAAGGGTGCTCGCCTGTGAGGGTTCCCCTGCGTTGAATCGTGCGGT
GGAGAAGGAGAAGGGATGCCAGCACATCGTGGTGGAGGGGTGGGAGGAAA
TAATCCACGTGGGGGGGTAGATCGAGCGTGGGTTCGGCGAGAGAGCTCAC
TGGCCGGTCTCAAGCTTGTCCTCTCCGGGGAGGGGGGTCATGCGAGGTTA
GAAGGGTTGAGCGCATAAATTGATTTGAAGAAGGAAGCAATTGAAAAGAG
ATGAGGATCGAATGCCTAACCGTACACATGTCCACCGGCCCTTTTTTTGC
TTCCGTGATGCTGCGACGCGTGTTCGGGACAATCCAGTTGA
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protein sequence of rna2315

>rna2315-protein ID=rna2315-protein|Name=rna2315|organism=Nannochloropsis gaditana|type=polypeptide|length=129bp
MTAQRIFVPIFLCLASASAFFMAPPRSILKAGEVVSLPDHLFSSSLTEQQ
AGRSKGVLFSLVINPKRQGITQLGVEEIKARKAALLRTCRGLSWSRGLWR
RRCSRSSTTSGCGHASRPLPRMRFRPASG
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mRNA from alignment at CM002459.1:98093..99197-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna2315 ID=rna2315|Name=rna2315|organism=Nannochloropsis gaditana|type=mRNA|length=1105bp|location=Sequence derived from alignment at CM002459.1:98093..99197- (Nannochloropsis gaditana)
ATGACAGCACAACGTATTTTTGTGCCGATCTTCCTGTGCTTGGCAAGTGC
CAGCGCATTTTTCATGGCGCCGCCACGGGTAAGTGACAGGAGAGGGAGAG
GGGCCAACGACGGAAAGGAGCATGGAAAGCGACGTGCTTCTACAGGTGCA
CGGGCTCTTCCCTGTCCTGAAAATACACTCAGCACCCTCGATTCATCCAT
TCTACGACATGTGAACAGTCGATTCTCAAGGCTGGGGAAGTGGTGTCGCT
GCCCGATCATTTGTTTTCTTCCTCTCTGACCGAGCAGCAGGCCGGACGCA
GCAAAGGCGTTCTTTTCTCACTCGTGATTAATCCGAAACGACAAGGTAGG
GACGGGGGCTTCACAGCCAGACCGGTAGCATGAGGGCGGAAGCATACATG
GAAGACACGCGACATGAGGAAAAATAGGGAAGGGCTATGTTTTCATTATC
TTTCTGGCACGATGGCTCAGGTATTACCCAACTCGGAGTGGAGGAAATTA
AGGCGAGAAAAGCGGCTTTGCTGGTAAGCAGAAAGAGTGACAGAGGCAGG
GGGAATTGCTTTAAAAAAAGAAACGAAAAGAGGAGCATGAAGCAGACGAG
AAGGGGAGGAGGGAAAAGGGGGAACAGTTTAAAAGTCGTGAAGGGAAAGA
TGGACATGGAAGAGAGGCCAATGAGTGAGGGAAATGTGAATGGAGGACTT
AGGGCCTGCCTCGACAGAGGCTGTGTCCAGCAAGCCCCTCGTCCCCCGCA
TGGATGAAGCGCACATTCTTCATGATGGCTCAGGTCCTCTTTCTTCCCTC
CCCATCACTTTTCCCGTGCTACCTTCCCCTAGGCCCCAGCGGACTTGCAG
GGGGCTGTCTTGGTCTCGGGGTCTCTGGAGGAGGAGGTGTTCACGCTCCT
CAACGACCAGCGGGTGTGGACACGCATCACGGCCTTTGCCGAGGATGCGG
TTTCGGTGAGGGAGGGAGGGAGGGAGGGAGCGAGGGAGGGAAGGCGGATG
GCGCGGAGACGACCGCCTTGAGTGTCGCCCTCTCTACCCCGTCATGAGCG
GAGCTCACACCCTACACTTCTCCTCTTTCCCTCCCTCAGGCCCGCAAGCG
GTTGA
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Coding sequence (CDS) from alignment at CM002459.1:98093..99197-

>rna2315 ID=rna2315|Name=rna2315|organism=Nannochloropsis gaditana|type=CDS|length=1950bp|location=Sequence derived from alignment at CM002459.1:98093..99197- (Nannochloropsis gaditana)
GCCCGCAAGCGGTTGACGGACTTGCAGGGGGCTGTCTTGGTCTCGGGGTC
TCTGGAGGAGGAGGTGTTCACGCTCCTCAACGACCAGCGGGTGTGGACAC
GCATCACGGCCTTTGCCGAGGATGCGGTTTCGGTATTACCCAACTCGGAG
TGGAGGAAATTAAGGCGAGAAAAGCGGCTTTGCTGTCGATTCTCAAGGCT
GGGGAAGTGGTGTCGCTGCCCGATCATTTGTTTTCTTCCTCTCTGACCGA
GCAGCAGGCCGGACGCAGCAAAGGCGTTCTTTTCTCACTCGTGATTAATC
CGAAACGACAAGATGACAGCACAACGTATTTTTGTGCCGATCTTCCTGTG
CTTGGCAAGTGCCAGCGCATTTTTCATGGCGCCGCCACGGGCCCGCAAGC
GGTTGACGGACTTGCAGGGGGCTGTCTTGGTCTCGGGGTCTCTGGAGGAG
GAGGTGTTCACGCTCCTCAACGACCAGCGGGTGTGGACACGCATCACGGC
CTTTGCCGAGGATGCGGTTTCGGTATTACCCAACTCGGAGTGGAGGAAAT
TAAGGCGAGAAAAGCGGCTTTGCTGTCGATTCTCAAGGCTGGGGAAGTGG
TGTCGCTGCCCGATCATTTGTTTTCTTCCTCTCTGACCGAGCAGCAGGCC
GGACGCAGCAAAGGCGTTCTTTTCTCACTCGTGATTAATCCGAAACGACA
AGATGACAGCACAACGTATTTTTGTGCCGATCTTCCTGTGCTTGGCAAGT
GCCAGCGCATTTTTCATGGCGCCGCCACGGGCCCGCAAGCGGTTGACGGA
CTTGCAGGGGGCTGTCTTGGTCTCGGGGTCTCTGGAGGAGGAGGTGTTCA
CGCTCCTCAACGACCAGCGGGTGTGGACACGCATCACGGCCTTTGCCGAG
GATGCGGTTTCGGTATTACCCAACTCGGAGTGGAGGAAATTAAGGCGAGA
AAAGCGGCTTTGCTGTCGATTCTCAAGGCTGGGGAAGTGGTGTCGCTGCC
CGATCATTTGTTTTCTTCCTCTCTGACCGAGCAGCAGGCCGGACGCAGCA
AAGGCGTTCTTTTCTCACTCGTGATTAATCCGAAACGACAAGATGACAGC
ACAACGTATTTTTGTGCCGATCTTCCTGTGCTTGGCAAGTGCCAGCGCAT
TTTTCATGGCGCCGCCACGGGCCCGCAAGCGGTTGACGGACTTGCAGGGG
GCTGTCTTGGTCTCGGGGTCTCTGGAGGAGGAGGTGTTCACGCTCCTCAA
CGACCAGCGGGTGTGGACACGCATCACGGCCTTTGCCGAGGATGCGGTTT
CGGTATTACCCAACTCGGAGTGGAGGAAATTAAGGCGAGAAAAGCGGCTT
TGCTGTCGATTCTCAAGGCTGGGGAAGTGGTGTCGCTGCCCGATCATTTG
TTTTCTTCCTCTCTGACCGAGCAGCAGGCCGGACGCAGCAAAGGCGTTCT
TTTCTCACTCGTGATTAATCCGAAACGACAAGATGACAGCACAACGTATT
TTTGTGCCGATCTTCCTGTGCTTGGCAAGTGCCAGCGCATTTTTCATGGC
GCCGCCACGGGCCCGCAAGCGGTTGACGGACTTGCAGGGGGCTGTCTTGG
TCTCGGGGTCTCTGGAGGAGGAGGTGTTCACGCTCCTCAACGACCAGCGG
GTGTGGACACGCATCACGGCCTTTGCCGAGGATGCGGTTTCGGTATTACC
CAACTCGGAGTGGAGGAAATTAAGGCGAGAAAAGCGGCTTTGCTGTCGAT
TCTCAAGGCTGGGGAAGTGGTGTCGCTGCCCGATCATTTGTTTTCTTCCT
CTCTGACCGAGCAGCAGGCCGGACGCAGCAAAGGCGTTCTTTTCTCACTC
GTGATTAATCCGAAACGACAAGATGACAGCACAACGTATTTTTGTGCCGA
TCTTCCTGTGCTTGGCAAGTGCCAGCGCATTTTTCATGGCGCCGCCACGG
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Synonyms
Publications