rna2310, rna2310 (mRNA) Nannochloropsis gaditana

Overview
Namerna2310
Unique Namerna2310
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length564
Alignment locationCM002459.1:82088..83382 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100329g1.5236.mrna
Orig protein idgnl|cribi|Naga_100329g1.5236
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:82088..83382 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100329g1gene2205Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM28369.1cds2302Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna2310rna2310-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna2310 ID=rna2310|Name=rna2310|organism=Nannochloropsis gaditana|type=mRNA|length=564bp
TTTTCTTCTTCTTCTTCTTTTTCTTCTTCTTCTTCTTCTTCAGGCCCCTC
CGCCTCCAAGAAAGAGAAAGAAGAACACCAAGGGGACTGCTTGCACCTGC
CCTCGGACAGGTCCGAGAAGGAATGGCTCTGTGTCGATTTTGCCGCGGTC
GAACGGACACTGGATGCGGCGATACGTGCCAAATCTGAGAAGACGAGCAG
AGCTGCCAGCAAAACAAGCCCTTCAAGGGGATTGGGTTTCTGTGCACAAC
CGCGCTCAGGAGGGAGGTATAGGGGCTGGGGGGGAAGCAGGGGGAGGTCG
GGGGAGGAAGTTTGCGGTGAGAAGGAGGAAGACAGGATGAAGGCAGGAAG
ACCTGAACATGGGAGGGAGGAGGAAGAGTTCAATTAGATAGGATTAATTT
GGACGGGACTCGGACCTGTAAAGTAGACTTAGGTAGTGACAATGTAAAGC
AATACAGGCAAACAGTTGGCCAGACTCGATTATAAATTGGCATTTTAAAA
ACATACGTGTCCTGCGACATTTTCTTCCACTTTAGGTCGGAAAAACAATG
AGTATCAACAATGC
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protein sequence of rna2310

>rna2310-protein ID=rna2310-protein|Name=rna2310|organism=Nannochloropsis gaditana|type=polypeptide|length=114bp
MLGRREGHGHKKRSASLAACRCFLMALHLVPGQAFFLPAWRSWGLLPPVP
TSIPITRSPVVFHQPSNVLPRRTTTSATSPAPVPPRKDKFAALVSCSAVY
QGPCGYRTSRALFD
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mRNA from alignment at CM002459.1:82088..83382-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna2310 ID=rna2310|Name=rna2310|organism=Nannochloropsis gaditana|type=mRNA|length=1295bp|location=Sequence derived from alignment at CM002459.1:82088..83382- (Nannochloropsis gaditana)
CTCTCCTTGGTTTCAAAAAGCTTTCGTGGGGTGGGTCACTTGGATACCCG
GAGGATCCCCTGGCTAAAGGCAATGTCTGGACAGCTCTCATAAAATTCCA
CGATTCTTGTAAATTCTCCTGAGTAGAGTATGAAGTCGGTCTCGGAAAAT
TTCAATCAAGTTTAACCTCCGACCCCAAGATGTGCGCTCGAAAGGCAATC
GAAGGAATCACGTTTTCGGAGATCTCCTGGATGACGGCAAGTCAGGAAAG
CCATCGCCCTCCGTCGGGAGGCAACTTCAGTTTCGGGTAAAAAGTGAAGT
CTGTGGACGTAAAAGGGTCGCAATTTGCCTGCGAAAGATGAATACTTGAT
GGAATATGTACATTCGGCCTTTCATGTCGTTAATGAGTGTCCATATGGAA
CCTTTCATCCCCCCCAGGTCGGTTGCCTCCACGTCTTGTACGTCTTTCCT
CCCTTCAACACAGATCCCGCACTTGGTGCGAGGGGAGATTGAAATACGGT
AGAGGCGTGCTTCGTCCTAACATTCCATGATGGCAGAATTTTCCGCCACT
TTGTCTCTAGCTAATGAGATGTGCATTTCTAATTATCCATTCCTACTGCA
ATATCAACCTAGATGAGGACCAGCAACTGATTGCACGCAGCAAAAATAGG
GCCCGGCGCGACAGAACACAATGTTGGGCAGAAGAGAAGGGCATGGCCAT
AAAAAGCGAAGTGCATCATTGGCGGCTTGCCGGTGCTTCTTGATGGCATT
GCACTTGGTGCCGGGGCAAGCTTTTTTCCTCCCTGCCTGGCGGTCGTGGG
GCCTTCTCCCTCCAGTACCCACGTCCATCCCCATCACACGTTCACCCGTC
GTATTTCATCAGCCCTCAAATGTCTTGCCGAGAAGGACGACAACCTCGGC
GACGTCTCCTGCGCCGGTGCCGCCCAGAAAAGACAAATTTGCGGCCTTGG
TAAGTTGCTCAGCTGTCTACCAGGGTCCATGCGGCTATCGGACTTCACGC
GCTCTCTTTGATTGATGGAAACCCTGAGAGTGTTTTCATTCCATGAGCGT
TCACTCTTCCAAAACTCTTCAGGACGATGCTCCATGGGCTCCTGTGATCG
CTCCACCCCCCCTTCATTCCCCCCTTCCGTTTCCCCCCGCCCTCCTCCCC
TCTCTCCCTTCCTGCTTCGCTTCTCTTTCTTTCTCCGCGTTGAAGACGCA
ACCCCTCCAGGCCATGAAGACGGGCGACCTCCGAAAGTCTCTCTTTCTCT
CCGCCAAGGTGCTCAATTTGACGCGTGCATTGGACACGTTCCAGG
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Coding sequence (CDS) from alignment at CM002459.1:82088..83382-

>rna2310 ID=rna2310|Name=rna2310|organism=Nannochloropsis gaditana|type=CDS|length=345bp|location=Sequence derived from alignment at CM002459.1:82088..83382- (Nannochloropsis gaditana)
ATGTTGGGCAGAAGAGAAGGGCATGGCCATAAAAAGCGAAGTGCATCATT
GGCGGCTTGCCGGTGCTTCTTGATGGCATTGCACTTGGTGCCGGGGCAAG
CTTTTTTCCTCCCTGCCTGGCGGTCGTGGGGCCTTCTCCCTCCAGTACCC
ACGTCCATCCCCATCACACGTTCACCCGTCGTATTTCATCAGCCCTCAAA
TGTCTTGCCGAGAAGGACGACAACCTCGGCGACGTCTCCTGCGCCGGTGC
CGCCCAGAAAAGACAAATTTGCGGCCTTGGTAAGTTGCTCAGCTGTCTAC
CAGGGTCCATGCGGCTATCGGACTTCACGCGCTCTCTTTGATTGA
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Synonyms
Publications