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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100616g3.10676.mrna |
| Orig protein id | gnl|cribi|Naga_100616g3.10676 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002459.1 | supercontig | CM002459.1:76121..77322 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2306 ID=rna2306|Name=rna2306|organism=Nannochloropsis gaditana|type=mRNA|length=1666bp
ACACATGTCCAGCTATCGCGTTTATGGGCACATCTATAGAGCTGTGTAAT
TTCTAGCTGATAAAATGTAGGTAGAGTAAACATCATGCTGTAGTGAAGGT
GGCGTGGGACCAAGTTATCCAAGGTTTACAGGTATAACGCGGCCTCTCGA
TTAACCTCCTCTGCCGTGCTTGCTTGTCACTTCTGCTTTTGAAAAGGAAA
CAGAAAAGACTTCGATGCTCCCCGTGTGTAGTCTTCGCCTGTCATACTCT
CAAAAATTCCTTTTTTTCGTTGTCGTTCCACCATTTGTGCCTTCAGTCAC
AGGCATAAGGCGGTTGACGGCGCCCTGCTACATGCAGCATATCATCCTCG
TACTTTTTTTCTGTTTTGTCAGCTTCGGGCATCCGTTCAGTCACAATCTT
ATTTCAACAGGTCACTCAGATCTATCTGACATGACTGCTGGGATGCCTCA
TCCCAAAGGCGCGGTTGTCGCCGGGACCTGGCTATTTGGAAGGCTAGCGG
TCGAGAAGGCAGCTGAAGTGCTCTTGTCTTCCTCCACCTCCCCTACAGCA
CCTCCTTCTATTGATCATCCTTCCGAGACTAATCTTGCCACGTCTATAGC
CCTGGATGCCGTTGAAGCCGGTATAAATGTCGTGGAGTTGGATAATCAAG
ATCAGTACTACGTGGGATACGGTGGTTTCCCGAACGCGGAAGGAGAAATG
GAATTGGATGCCGCCATCATGTGTGGGAGTCGCAAGACCTACGGCGGAGT
TGCCGCGCTTCAGGGAGTAAGCCGAGCAATATCCGTGGCCCGGCGTGTGA
TGGAGGAGAGCGTTCACAGTTTGTTGGTCGGGCGGGGCGCGAGTACATTC
GCCAGGAGCCAGGGCTTTGAGTGGGACGAGGTTTTGTCCCCCGCCGCCAG
AGAAGAGTGGCTTATCTGGAAAGGAAACGAAGGAAAGGAGGGCCCACAGG
TGGACGGCCGCAAGGAGGAAAGCGCCGGGGTCCCGGCTCCCCCAAGAGAG
GGGGACGCAGTGGCTCCACACGACACCGTCGGTCTTCTTGTCCTCGATGC
ACATGGAAACTTGGCCGCGGGCACTTCCACGTCTGGGTGGTGCTTTAAGC
ATCCAGGGCGTGTGGGCGACTCGCCCATCGTTGGCAGTGGGCTGTATGCC
GACAGTGCCGTAGGGGGCGCCGTCGCAACAGGTGACGGCGAAGAGATTAT
GCGCGTCTGCCTCTCTTTCTTGGTGGTGGAAAAGATGAGGGAAGGTCTGG
GCCCGGCCTTGGCCTGTCAAGCGGGCATCCAACGCTTGAAGGTCCTGATC
AGGGAGGGAGGGGGGGAGGGCGAGAGACAGGGCATGCACGAAAGCCTGAC
GGTGGCCGTCATGGCCCTGGACAAAGAGGGGAGGGTGGGCGCTGCGTCCA
CCTTGGGGGAGCACAACCGGCACCGGGGGCGTCCAGGTTTCCCTTTTGTT
GTGTGGAAAGAGGGGCTTGGAAAGGCCTGGGTGGAGGAAGCGGACGACAC
GGGAACGGCGTGAGGCCAATTACGTAATGTGGAGGTGGGAGAGGGGGGGC
TGTGGTGGAAGCTGACTTTGTTCTGAGCGTACGAGATCACTGCGTGCGTG
GAACTATTGAGCCCACTGAAAGAAAGATGTGTCGGATAAAAAATAATGGT
TTGCGTCGTGGCCTGG back to topprotein sequence of rna2306 >rna2306-protein ID=rna2306-protein|Name=rna2306|organism=Nannochloropsis gaditana|type=polypeptide|length=227bp
MSTSRFFRRAESQLAASLVFILLFSLLLSADCFLFRSSFLGPCTASTSSP
CGKVTLQCKTIYMICKSYHDNCSEDGKGATWDESPCPCTDLGEGLGSPGP
LTDSCTVGDVIVLVLPFSLSHSSTFLALAVVDGPKEACLLCLRDPETREW
YRDNRSDATVLRGLTRESLLQVVENASYSQRNIPSLGGGVGYGADAEDCW
LIEEKDLPGGLVKPLDVKATAPWVFVG back to topmRNA from alignment at CM002459.1:76121..77322- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna2306 ID=rna2306|Name=rna2306|organism=Nannochloropsis gaditana|type=mRNA|length=1202bp|location=Sequence derived from alignment at CM002459.1:76121..77322- (Nannochloropsis gaditana)
CATCAGCTTTACAAGCATTTATCGCTTTTGCGGAGGGCATCGATTCCTTT
CGGGTGAGACCACAAAAGACTGAACGTGTGGACGGTAGTGCTGACACTAG
CGTTTGCAATCTTTCTATCTTTTGTTTGTTAGACACTGGATGCAGGCCTA
CATCATGGGCTCGCTCTCTTTCTCCCGGAAAGGAAAAGTAGAGCAAAGAC
AGGTTCTTGAGGGGTAAGTACTGCTAGTAGCAGAGGGAGGAGGTTCACTT
GCGTGCCGGATGGTCAATTTTATCCTTCAACAAGATTCTTTCAACTGTCC
CTGACAATCGTCACAGGCAACAGTAATGTCCACGTCACGATTCTTCCGAC
GAGCAGAGTCGCAGCTCGCGGCATCTCTGGTCTTCATTCTGCTGTTTTCC
CTCCTATTATCCGCGGACTGCTTCCTTTTTCGGAGCAGTTTCCTGGGCCC
CTGTACTGCCTCCACGAGCTCCCCCTGCGGTAAAGTGACTCTGCAATGTA
AGACCATATACATGATATGCAAGAGCTACCATGACAATTGCAGTGAGGAT
GGAAAAGGCGCCACTTGGGACGAATCACCTTGTCCATGCACGGATTTAGG
CGAAGGATTGGGCAGCCCAGGGCCGTTGACCGATTCTTGTACAGTGGGGG
ATGTCATCGTCCTCGTCCTCCCATTCTCTCTCTCGCATAGCTCCACGTTC
CTCGCCCTCGCTGTTGTAGATGGGCCTAAAGAGGCCTGCCTCCTGTGTCT
GCGCGATCCCGAAACACGGGAGTGGTACCGGGACAACCGTAGTGACGCAA
CTGTCTTGCGAGGATTGACGAGGGAAAGTTTGCTTCAGGTGGTTGAAAAC
GCGTCCTACAGCCAGCGAAACATTCCTTCCTTGGGAGGAGGAGTTGGGTA
CGGGGCAGACGCGGAGGACTGCTGGTTGATTGAGGAGAAAGATTTGCCGG
GGGGGTTGGTTAAACCCCTAGATGTCAAAGCGACAGCGCCGTGGGTGTTC
GTGGGGTAGGGAGGATAGAGGGGAATACGACGCCCCCAAAAAAATGAAGA
AGGATCAGGAGTGAACGGGATGCACAAAATGGAGGACAGGGTAAGGAGAG
TAAATTTCGTGTTGAAGTAATCTGTACATAGACCACAGCTATGCGAGGCT
TTCAAAGATGCCTCTATCCAGGCCACGACGCAAACCATTATTTTTTATCC
GA back to topCoding sequence (CDS) from alignment at CM002459.1:76121..77322- >rna2306 ID=rna2306|Name=rna2306|organism=Nannochloropsis gaditana|type=CDS|length=684bp|location=Sequence derived from alignment at CM002459.1:76121..77322- (Nannochloropsis gaditana)
ATGTCCACGTCACGATTCTTCCGACGAGCAGAGTCGCAGCTCGCGGCATC
TCTGGTCTTCATTCTGCTGTTTTCCCTCCTATTATCCGCGGACTGCTTCC
TTTTTCGGAGCAGTTTCCTGGGCCCCTGTACTGCCTCCACGAGCTCCCCC
TGCGGTAAAGTGACTCTGCAATGTAAGACCATATACATGATATGCAAGAG
CTACCATGACAATTGCAGTGAGGATGGAAAAGGCGCCACTTGGGACGAAT
CACCTTGTCCATGCACGGATTTAGGCGAAGGATTGGGCAGCCCAGGGCCG
TTGACCGATTCTTGTACAGTGGGGGATGTCATCGTCCTCGTCCTCCCATT
CTCTCTCTCGCATAGCTCCACGTTCCTCGCCCTCGCTGTTGTAGATGGGC
CTAAAGAGGCCTGCCTCCTGTGTCTGCGCGATCCCGAAACACGGGAGTGG
TACCGGGACAACCGTAGTGACGCAACTGTCTTGCGAGGATTGACGAGGGA
AAGTTTGCTTCAGGTGGTTGAAAACGCGTCCTACAGCCAGCGAAACATTC
CTTCCTTGGGAGGAGGAGTTGGGTACGGGGCAGACGCGGAGGACTGCTGG
TTGATTGAGGAGAAAGATTTGCCGGGGGGGTTGGTTAAACCCCTAGATGT
CAAAGCGACAGCGCCGTGGGTGTTCGTGGGGTAG back to top
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