rna2302, rna2302 (mRNA) Nannochloropsis gaditana

Overview
Namerna2302
Unique Namerna2302
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length527
Alignment locationCM002459.1:68430..69804 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101161g1.6792.mrna
Orig protein idgnl|cribi|Naga_101161g1.6792
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:68430..69804 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101161g1gene2198Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM28379.1cds2294Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna2302rna2302-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna2302 ID=rna2302|Name=rna2302|organism=Nannochloropsis gaditana|type=mRNA|length=527bp
ATTTAATGTTTACACTCGCTGGAATTATTCGTCTCGGGTAATTGTTGATC
TCCAGGTGGGGGCTGGGAAAGCGTCCTTTGTCGATAACATGTGCCAATAA
TTTTTGCCCGAAGAGATGCACACCAAGCTTGATGCATTTGGCGCATGTGT
ATATTTGTTGTATGGTCTGGATCTCCATCGCGGGCTTTTGATGCTTTCTA
GGATTGTGTTTAACCAACTTTACGGGAAAAGGTCAGCAGATCGATCCGAT
ATCTGCCTTGTCGAGCCAGCGGACGGTCTTTTCGTCTCCGTTTGCGTCTG
TGCGGGTCCAAAAAGGGCGACAGAAATGGGAAAGAACGGAATAGTGCCAC
CAGAACTGCATGTGGAATCTATTACATTCGGTAGGATCTATATTCCAAAG
AAGAGGGCTGAAGTCTCGAGATTGATCCGTCATTTTTACATCGAGAGTGT
AGTTTACCGGTGAGACTTTTGCAACCCCTCGTTTGCTTTAACCATCGGGC
ATCATTAACAAAACAGAACAGAAGAAC
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protein sequence of rna2302

>rna2302-protein ID=rna2302-protein|Name=rna2302|organism=Nannochloropsis gaditana|type=polypeptide|length=331bp
MWAVPAPALTHAHAFPPSLPPPPLSQDLMPQGHEEFIATLCRCLETVEGD
GEKIDVGRGGGRDGGQGPYRGGQTCQEWSHQCSPSSSFLQIHPSLQGVRD
RIAPLVQAEALAADGNGHSGVGGGRETSRWDGGGGGGGTPAPSPPSSASV
QAPIGKGTGMGTLGGGRLGINGRESESNGRVTAVSSSTISAAPMLNAAVM
AARAKIAAATGPEGGSSMHSTRSSSRLVDEGGGGRREREESDKPPSKPAS
PATSRYRSSERERGSRRSSERNGSRRQDGGSAGSSRRRPQVEEDERYQPR
SRSRSRSASPYRRSRRSSRRSQERGGSYRRY
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mRNA from alignment at CM002459.1:68430..69804-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna2302 ID=rna2302|Name=rna2302|organism=Nannochloropsis gaditana|type=mRNA|length=1375bp|location=Sequence derived from alignment at CM002459.1:68430..69804- (Nannochloropsis gaditana)
CTTCCCTGCCTGCCGTCCTGCTTCGTGTTCTCCCCCCGTCGCCCTCCTCC
CTTTCTCGTTCGACCTTGTATTTTCGCGCCTCCCTTTCTCATTACATTTT
TGGGAAGAGTCTTGCTCGTTCCACCCTGGCCTTTTCTTTTTTGGCACGCC
CTGCTTTCACTTTCGTCGGCCTTCCTCCCCCCTCTAACTCCTCATGTGGG
CCGTCCCAGCACCAGCCCTCACTCACGCTCACGCCTTCCCTCCCTCCCTC
CCTCCTCCTCCTCTTTCTCAGGACCTGATGCCGCAGGGGCACGAGGAATT
CATCGCCACCCTCTGTCGATGTTTGGAGACTGTGGAGGGGGACGGCGAGA
AGATCGACGTAGGGCGGGGGGGAGGGAGGGATGGAGGGCAAGGGCCCTAC
AGGGGAGGGCAAACGTGTCAGGAGTGGTCTCACCAATGTTCGCCTTCCTC
TTCATTTCTCCAGATACACCCCTCGCTACAGGGAGTCAGGGATCGGATCG
CCCCCCTCGTGCAAGCAGAGGCCCTGGCAGCCGACGGGAACGGCCATTCC
GGAGTAGGGGGAGGGAGGGAAACAAGCCGATGGGACGGAGGAGGAGGGGG
AGGGGGCACTCCCGCTCCCTCCCCGCCCTCCTCAGCCTCTGTGCAAGCCC
CCATCGGCAAGGGAACAGGGATGGGGACGTTGGGCGGGGGCCGGCTTGGA
ATTAACGGCCGGGAAAGTGAATCTAACGGTCGCGTAACGGCCGTTTCGTC
ATCCACTATCTCCGCGGCCCCGATGTTGAATGCTGCCGTGATGGCAGCAA
GGGCAAAGATAGCTGCGGCGACGGGACCAGAAGGAGGGTCGTCAATGCAT
TCTACAAGAAGCAGCAGCAGGCTTGTGGATGAAGGCGGGGGAGGGAGGAG
GGAAAGGGAGGAGAGTGACAAGCCCCCATCCAAACCTGCCTCCCCGGCTA
CGTCCCGCTACCGGAGCAGCGAGCGGGAAAGGGGGAGCCGACGGTCGTCC
GAACGGAACGGGAGCCGGCGTCAGGACGGTGGTTCTGCGGGAAGTAGTAG
GCGAAGACCGCAGGTGGAGGAGGACGAGAGGTATCAGCCTCGATCGCGGT
CGCGTTCGCGCTCGGCTTCTCCCTACCGGCGGTCAAGAAGGAGTTCCCGG
CGATCCCAGGAAAGGGGAGGGAGTTACAGACGGTATTGAGGAGGGTGGTG
GATGATTTGGAGGGAAGAGCTATCGGGCGGGGAAGGAAGTGGCGTGAGGT
GCCTGGAGCTGCACTAGGAAGAGGAAGGCAAGGGGGGATATGAAACAAGC
AAAGCTCGCAAGCACATTTTCAAGGGTTGTTATCCCGAACAATTGTTCTT
CTGTTCTGTTTTGTTAATGATGCCC
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Coding sequence (CDS) from alignment at CM002459.1:68430..69804-

>rna2302 ID=rna2302|Name=rna2302|organism=Nannochloropsis gaditana|type=CDS|length=996bp|location=Sequence derived from alignment at CM002459.1:68430..69804- (Nannochloropsis gaditana)
ATGTGGGCCGTCCCAGCACCAGCCCTCACTCACGCTCACGCCTTCCCTCC
CTCCCTCCCTCCTCCTCCTCTTTCTCAGGACCTGATGCCGCAGGGGCACG
AGGAATTCATCGCCACCCTCTGTCGATGTTTGGAGACTGTGGAGGGGGAC
GGCGAGAAGATCGACGTAGGGCGGGGGGGAGGGAGGGATGGAGGGCAAGG
GCCCTACAGGGGAGGGCAAACGTGTCAGGAGTGGTCTCACCAATGTTCGC
CTTCCTCTTCATTTCTCCAGATACACCCCTCGCTACAGGGAGTCAGGGAT
CGGATCGCCCCCCTCGTGCAAGCAGAGGCCCTGGCAGCCGACGGGAACGG
CCATTCCGGAGTAGGGGGAGGGAGGGAAACAAGCCGATGGGACGGAGGAG
GAGGGGGAGGGGGCACTCCCGCTCCCTCCCCGCCCTCCTCAGCCTCTGTG
CAAGCCCCCATCGGCAAGGGAACAGGGATGGGGACGTTGGGCGGGGGCCG
GCTTGGAATTAACGGCCGGGAAAGTGAATCTAACGGTCGCGTAACGGCCG
TTTCGTCATCCACTATCTCCGCGGCCCCGATGTTGAATGCTGCCGTGATG
GCAGCAAGGGCAAAGATAGCTGCGGCGACGGGACCAGAAGGAGGGTCGTC
AATGCATTCTACAAGAAGCAGCAGCAGGCTTGTGGATGAAGGCGGGGGAG
GGAGGAGGGAAAGGGAGGAGAGTGACAAGCCCCCATCCAAACCTGCCTCC
CCGGCTACGTCCCGCTACCGGAGCAGCGAGCGGGAAAGGGGGAGCCGACG
GTCGTCCGAACGGAACGGGAGCCGGCGTCAGGACGGTGGTTCTGCGGGAA
GTAGTAGGCGAAGACCGCAGGTGGAGGAGGACGAGAGGTATCAGCCTCGA
TCGCGGTCGCGTTCGCGCTCGGCTTCTCCCTACCGGCGGTCAAGAAGGAG
TTCCCGGCGATCCCAGGAAAGGGGAGGGAGTTACAGACGGTATTGA
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Synonyms
Publications