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Properties
| Property Name | Value |
| Product | sulfate permease family |
| Orig transcript id | gnl|cribi|Naga_100206g7.1429.mrna |
| Orig protein id | gnl|cribi|Naga_100206g7.1429 |
| Gbkey | mRNA |
| Note | encoded by transcript variant 1; alternatively spliced |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| CM002459.1 | supercontig | CM002459.1:771..4128 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2277 ID=rna2277|Name=rna2277|organism=Nannochloropsis gaditana|type=mRNA|length=240bp ATGGATCTTGACGTTTATGTAAGGCGCGCAGGAAGCCTTGGCTACATAAG AGAAACAAAGGGACCAGAAGCCCAATCATTCATCGACAAGCAGGTTCAAT TGTGGTACACGCAGAGTTTTTCCGGGTCGTGGTCAGGCACGTATAAGCCT GGCTTGGTAAAAATTGAAACAAGCTACCTAACTTGGTTCGGCTCCAACGA AAACGGACTCCGAAGCCGAATCAGCGTCCTCATTTTGTGA back to topprotein sequence of rna2277 >rna2277-protein ID=rna2277-protein|Name=rna2277|organism=Nannochloropsis gaditana|type=polypeptide|length=1003bp MTGTSYLSPPQHHRGVSIQSSPSFVKEDTVQVQISHKDGEEKESWYQQPL NSVIYGIINTIACVPILYGYAQIVFSQGLFQPFMPMLAKLFILSSVVHQA IFSLFSTLPYAVGQIQDAGLIFLSKIATSVVFLLQDKPAEVVVSTALVTL GLSTAVLGATLMALGHYKLARLVSYLPLPVIGGQIVFIAAFCFRAGVALS VGHDLDSLQAWRALYDPRAVVLVLPGILAGVVLSIVAHSFKHFLALPVAM VCVPLVFYGVLFLAGESMEGARDFGWVGPANAPASWQASVALYQVWPPDL LGRIEWWVVPYQLPTLLGMIFVVSFSSCLDIVAIEMDSGRPLNKNHELST VGASNLIAGLCGGFTGSYIFSQTIFTYRTQTRSRLCGLVLIMAELAVFFC DVDLMSYIPLYFFAATLHFITFELMLEWLVEARLRMTAKEYVVLWTTFLG NVAFGIIPGFALGIVLSMAMFIISYAKSTARTAQAQRQRSRVARLRGARR LLDHGKILTLELNGAIFFGSSITTLEHIKSLLGVAQSPSRKAKERSTERR KGKMVGYRPSRTHSRRSLTEQAEMWAGGQSIGSADAHTKFAGRRVSSNAL TGSRNRTFLNLSSSLWTRVWHGGSVDAPKEAQEAAVDEEEATEASPLVGQ SSAASLAGLGSSLPPSSSPSHDGRSIGGGASAVTGTYGTGMKPFSEAMTQ EMQASGTGAANHFANAPKPRFLILDFRRVPAIDMSSVVNCFLPLQTLCKD VQVILCYSNCNVRVEFYLRANRLLADNNTRLFPTLHQALDSCETALLAEE SQHTHGHSLRARAFSLRGMQELSVVSVLRKLLLEEEEEDGEGQEIGPGMA SSVDEDALEMIAHYAREETFREEDSIFYKEDISDSFYLILSGEVALESLE EDAREEPMRAADRLPSWGGGSRDRRRRRVEVVLHSGSLFGFVDFFLENQR RRFFARAMTPVKLGVFSQTALRRLEEEHPRLMVLVQKLLLKQFSIELGNV SVL back to topmRNA from alignment at CM002459.1:771..4128+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2277 ID=rna2277|Name=rna2277|organism=Nannochloropsis gaditana|type=mRNA|length=3358bp|location=Sequence derived from alignment at CM002459.1:771..4128+ (Nannochloropsis gaditana) TTCATCTTTTACGACCTCGACAAGACTACTCATGCTGTCATCTCAATACC
GCTATGTAAAATGACAGCAGGTTCTATGCGACTTAAGGAACGATATTGAA
CAGCCGGTGCACTTGCACCACTGCGATGCATTATGACAGGTACCTCCTAt
ttgtctcctcctcagcacCATCGGGGCGTGTCGATACagtcttcgccttc
ttttgTGAAAGAGGACACCGTTCAAGTTCAAATATCGCATaaggacggag
aagaaaaagaatcaTGGTATCAGCAACCACTCAACAGCGTGATCTACGGC
ATGTGAGTAGCGGCTACGCCCATAGTCGAGAAACGATACCTCCACCTTTC
CATTTCCCAGCAAAGATTTGTTCACTCTTTTCCTGAAAATCTTTAATACT
TGTACAGCATAAATACGATTGCTTGCGTACCAATTCTGTATGGTTATGCA
CAAATCGTGTTCTCCCAAGGCCTTTTCCAACCCTTCATGCCCATGCTCGC
CAAGCTTTTCATCCTGTCGTCCGTCGTGCATCAAGCcattttctctctct
tctcaaCCCTGCCCTACGCAGTGGGTCAGATACAAGATGCTGGACTCATT
TTTCTGTCGAAAATTGCAACTAGTGTGGTATTTTTACTACAGGATAAGCC
TGCAGAGGTTGTGGTTTCTACCGCCCTCGTCACATTGGGCTTGAGCACGG
CTGTGCTTGGAGCTACTCTGATGGCCCTTGGGCACTATAAGCTTGCACGC
CTGGTGTCTTATCTACCATTACCGGTGATCGGGGGGCAAATCGTCTTTAT
TGCGGCCTTCTGCTTCCGCGCGGGCGTGGCGCTCTCTGTCGGCCACGACC
TGGACTCTCTTCAGGCTTGGAGAGCCCTGTACGATCCCCGGGCAGTTGTG
CTGGTCCTTCCAGGCATCTTGGCAGGCGTGGTGCTTTCAATAGTGGCCCA
TTCGTTTAAGCACTTTCTCGCTTTGCCTGTGGCCATGGTCTGTGTGCCCC
TCGTCTTCTACGGCGTGCTCTTCTTGGCCGGAgagagcatggagggggcg
agggactTCGGCTGGGTGGGGCCCGCCAATGCACCAGCATCTTGGCAGGC
CTCCGTAGCGCTCTATCAGGTCTGGCCGCCGGACTTATTAGGCCGGATCG
AGTGGTGGGTGGTGCCCTACCAGCTCCCCACGTTGCTGGGAATGATCTTT
GTCGTCTCCTTCAGCAGCTGCCTGGACATCGTGGCTATCGAGATGGACAG
CGGTCGGCCGCTGAACAAAAACCACGAGCTTTCCACTGTGGGGGCCTCCA
ATCTCATCGCTGGTTTGTGCGGGGGGTTTACGGGCTCCTACATATTCTCC
CAGACCATCTTCACGTACCGCACGCAAACTCGTTCTCGACTCTgcggcct
cgtcctcatcatGGCGGAACTGGCGGTCTTTTTCTGCGATGTGGATCTCA
TGTCCTACATCCCGCTGTACTTTTTCGCTGCGACCCTTCATTTCATTACC
TTTGAGCTGATGCTCGagtggctggtggaggcgcggCTGCGCATGACGGC
CAAGGAGTACGTGGTCCTGTGGACGACGTTTTTGGGCAATGTGGCTTTCG
GCATTATTCCCGGCTTTGCCTTGGGGATAGTGCTCTCGATGGCGATGTTT
ATAATTTCTTACGCCAAAAGCACCGCCCGGACTGCTCAGGCCCAGCGCCA
ACGCAGCCGCGTGGCGCGCCTAAGGGGTGCGCGCAGGCTTCTCGACCACG
GGAAGATTTTGACGCTAGAGCTTAACGGGGCTATATTTTTTGGAAGCAGT
ATCACGACCCTCGAGCACATCAAATCCTTGTTGGGGGTAGCGCAATCCCC
TTCACGGAAAGCCAAAGAACGATCGACCGagcggagaaaaggaaagatgg
tGGGGTATCGTCCTTCTCGGACGCACTCCCGACGATCACTCACCGAGCAG
GCAGAAATGTGGGCTGGCGGTCAGAGCATTGGCTCTGCAGATGCTCATAC
GAAGTTtgcaggaagaagagtgTCGTCCAATGCTTTGACAGGGAGCAGGA
ACAGGACCTTTCTAAACCTTTCTAGCAGCTTGTGGACGCGCGTCTGGCAC
GGAGGGAGTGTTGACGCGCCTAAGGAAGCGCAGGAGGCAGCtgtggatga
agaggaagcaacaGAAGCGTCACCGCTTGTTGGTCAGTCGTCTGCTGCCT
CTCTGGCGGGGCttggctcctcccttcccccctcgtcttctccgaGCCAC
GATGGCAGGAGTATTGGTGGCGGTGCTTCCGCAGTCACCGGTACTTACGG
GACCGGAATGAAGCCATTCAGCGAAGCAATGACACAAGAAATGCAAGCGT
CTGGTACTGGCGCTGCCAATCATTTTGCGAACGCCCCAAAGCCTCGCTTT
CTCATACTGGATTTCCGACGGGTGCCCGCTATCGATATGTCGAGTGTTGT
GAATTGCTTTTTGCCGCTGCAAACACTCTGCAAGGACGTGCAGGTCATTC
TTTGCTACAGCAATTGCAACGTCCGCGTAGAATTCTACTTAAGGGCAAAC
CGGCTGCTTGCAGACAACAATActcgcctctttcccaccctgcaCCAGGC
GCTGGATTCCTGTGAGACGGCTTTGCTCGCTGAAGAGTCGCAGCATACTC
ATGGGCATTCCCTGCGAGCCCGGGCTTTCTCGTTGCGTGGAATGCAAGAG
TTGAGCGTTGTGAGTGTCCTTCGGAAActgcttttggaggaggaggaaga
ggacggagaaggacaggagaTTGGACCGGGAATGGCAAGTTCCGTTGATG
AGGATGCGTTGGAGATGATAGCTCACTACGCACGAGAAGAGACATTTCGC
GAGGAAGATTCCATCTTCTACAAGGAAGACATCTCTGACTCTTTCTACCT
CATTCTCTCTGGGGAGGTGGCTCTTGAAtcgctggaagaggacgccAGAG
AGGAGCCTATGAGGGCCGCGGACCGTTTGCCCTCgtggggaggtggaagc
cgGGACAGGCGTCGACGGCGCGTGGAGGTTGTGCTGCATTCAGGCTCGCT
CTTTGGCTTCGTGGACTTCTTTTTAGAAAACCAACGCCGGCGATTCTTCG
CGCGAGCGATGACGCCTGTCAAGCTCGGTGTCTTCAGTCAGACAGCGCTC
AGGCGTCTCGAGGAAGAACATCCGCGCTTGATGGTGTTGGTCCAAAAGCT
CTTGCTGAAACAATTCTCTATCGAACTCGGGAACGTATCCGTCTTGTAAA
TACACATGCAAAAGGAATCATTGCCAGATAGAGTAGAGGTGATGGGCAAG
AGCAAGTAGAAAGTACATGTCACATTTCAAAAACAAGACATACAACGAAG
AGCGAAAT back to topCoding sequence (CDS) from alignment at CM002459.1:771..4128+ >rna2277 ID=rna2277|Name=rna2277|organism=Nannochloropsis gaditana|type=CDS|length=6024bp|location=Sequence derived from alignment at CM002459.1:771..4128+ (Nannochloropsis gaditana) ATGACAGGTACCTCCTAtttgtctcctcctcagcacCATCGGGGCGTGTC GATACagtcttcgccttcttttgTGAAAGAGGACACCGTTCAAGTTCAAA TATCGCATaaggacggagaagaaaaagaatcaTGGTATCAGCAACCACTC AACAGCGTGATCTACGGCATCATAAATACGATTGCTTGCGTACCAATTCT GTATGGTTATGCACAAATCGTGTTCTCCCAAGGCCTTTTCCAACCCTTCA TGCCCATGCTCGCCAAGCTTTTCATCCTGTCGTCCGTCGTGCATCAAGCc attttctctctcttctcaaCCCTGCCCTACGCAGTGGGTCAGATACAAGA TGCTGGACTCATTTTTCTGTCGAAAATTGCAACTAGTGTGGTATTTTTAC TACAGGATAAGCCTGCAGAGGTTGTGGTTTCTACCGCCCTCGTCACATTG GGCTTGAGCACGGCTGTGCTTGGAGCTACTCTGATGGCCCTTGGGCACTA TAAGCTTGCACGCCTGGTGTCTTATCTACCATTACCGGTGATCGGGGGGC AAATCGTCTTTATTGCGGCCTTCTGCTTCCGCGCGGGCGTGGCGCTCTCT GTCGGCCACGACCTGGACTCTCTTCAGGCTTGGAGAGCCCTGTACGATCC CCGGGCAGTTGTGCTGGTCCTTCCAGGCATCTTGGCAGGCGTGGTGCTTT CAATAGTGGCCCATTCGTTTAAGCACTTTCTCGCTTTGCCTGTGGCCATG GTCTGTGTGCCCCTCGTCTTCTACGGCGTGCTCTTCTTGGCCGGAgagag catggagggggcgagggactTCGGCTGGGTGGGGCCCGCCAATGCACCAG CATCTTGGCAGGCCTCCGTAGCGCTCTATCAGGTCTGGCCGCCGGACTTA TTAGGCCGGATCGAGTGGTGGGTGGTGCCCTACCAGCTCCCCACGTTGCT GGGAATGATCTTTGTCGTCTCCTTCAGCAGCTGCCTGGACATCGTGGCTA TCGAGATGGACAGCGGTCGGCCGCTGAACAAAAACCACGAGCTTTCCACT GTGGGGGCCTCCAATCTCATCGCTGGTTTGTGCGGGGGGTTTACGGGCTC CTACATATTCTCCCAGACCATCTTCACGTACCGCACGCAAACTCGTTCTC GACTCTgcggcctcgtcctcatcatGGCGGAACTGGCGGTCTTTTTCTGC GATGTGGATCTCATGTCCTACATCCCGCTGTACTTTTTCGCTGCGACCCT TCATTTCATTACCTTTGAGCTGATGCTCGagtggctggtggaggcgcggC TGCGCATGACGGCCAAGGAGTACGTGGTCCTGTGGACGACGTTTTTGGGC AATGTGGCTTTCGGCATTATTCCCGGCTTTGCCTTGGGGATAGTGCTCTC GATGGCGATGTTTATAATTTCTTACGCCAAAAGCACCGCCCGGACTGCTC AGGCCCAGCGCCAACGCAGCCGCGTGGCGCGCCTAAGGGGTGCGCGCAGG CTTCTCGACCACGGGAAGATTTTGACGCTAGAGCTTAACGGGGCTATATT TTTTGGAAGCAGTATCACGACCCTCGAGCACATCAAATCCTTGTTGGGGG TAGCGCAATCCCCTTCACGGAAAGCCAAAGAACGATCGACCGagcggaga aaaggaaagatggtGGGGTATCGTCCTTCTCGGACGCACTCCCGACGATC ACTCACCGAGCAGGCAGAAATGTGGGCTGGCGGTCAGAGCATTGGCTCTG CAGATGCTCATACGAAGTTtgcaggaagaagagtgTCGTCCAATGCTTTG ACAGGGAGCAGGAACAGGACCTTTCTAAACCTTTCTAGCAGCTTGTGGAC GCGCGTCTGGCACGGAGGGAGTGTTGACGCGCCTAAGGAAGCGCAGGAGG CAGCtgtggatgaagaggaagcaacaGAAGCGTCACCGCTTGTTGGTCAG TCGTCTGCTGCCTCTCTGGCGGGGCttggctcctcccttcccccctcgtc ttctccgaGCCACGATGGCAGGAGTATTGGTGGCGGTGCTTCCGCAGTCA CCGGTACTTACGGGACCGGAATGAAGCCATTCAGCGAAGCAATGACACAA GAAATGCAAGCGTCTGGTACTGGCGCTGCCAATCATTTTGCGAACGCCCC AAAGCCTCGCTTTCTCATACTGGATTTCCGACGGGTGCCCGCTATCGATA TGTCGAGTGTTGTGAATTGCTTTTTGCCGCTGCAAACACTCTGCAAGGAC GTGCAGGTCATTCTTTGCTACAGCAATTGCAACGTCCGCGTAGAATTCTA CTTAAGGGCAAACCGGCTGCTTGCAGACAACAATActcgcctctttccca ccctgcaCCAGGCGCTGGATTCCTGTGAGACGGCTTTGCTCGCTGAAGAG TCGCAGCATACTCATGGGCATTCCCTGCGAGCCCGGGCTTTCTCGTTGCG TGGAATGCAAGAGTTGAGCGTTGTGAGTGTCCTTCGGAAActgcttttgg aggaggaggaagaggacggagaaggacaggagaTTGGACCGGGAATGGCA AGTTCCGTTGATGAGGATGCGTTGGAGATGATAGCTCACTACGCACGAGA AGAGACATTTCGCGAGGAAGATTCCATCTTCTACAAGGAAGACATCTCTG ACTCTTTCTACCTCATTCTCTCTGGGGAGGTGGCTCTTGAAtcgctggaa gaggacgccAGAGAGGAGCCTATGAGGGCCGCGGACCGTTTGCCCTCgtg gggaggtggaagccgGGACAGGCGTCGACGGCGCGTGGAGGTTGTGCTGC ATTCAGGCTCGCTCTTTGGCTTCGTGGACTTCTTTTTAGAAAACCAACGC CGGCGATTCTTCGCGCGAGCGATGACGCCTGTCAAGCTCGGTGTCTTCAG TCAGACAGCGCTCAGGCGTCTCGAGGAAGAACATCCGCGCTTGATGGTGT TGGTCCAAAAGCTCTTGCTGAAACAATTCTCTATCGAACTCGGGAACGTA TCCGTCTTGTAAATGACAGGTACCTCCTAtttgtctcctcctcagcacCA TCGGGGCGTGTCGATACagtcttcgccttcttttgTGAAAGAGGACACCG TTCAAGTTCAAATATCGCATaaggacggagaagaaaaagaatcaTGGTAT CAGCAACCACTCAACAGCGTGATCTACGGCATCATAAATACGATTGCTTG CGTACCAATTCTGTATGGTTATGCACAAATCGTGTTCTCCCAAGGCCTTT TCCAACCCTTCATGCCCATGCTCGCCAAGCTTTTCATCCTGTCGTCCGTC GTGCATCAAGCcattttctctctcttctcaaCCCTGCCCTACGCAGTGGG TCAGATACAAGATGCTGGACTCATTTTTCTGTCGAAAATTGCAACTAGTG TGGTATTTTTACTACAGGATAAGCCTGCAGAGGTTGTGGTTTCTACCGCC CTCGTCACATTGGGCTTGAGCACGGCTGTGCTTGGAGCTACTCTGATGGC CCTTGGGCACTATAAGCTTGCACGCCTGGTGTCTTATCTACCATTACCGG TGATCGGGGGGCAAATCGTCTTTATTGCGGCCTTCTGCTTCCGCGCGGGC GTGGCGCTCTCTGTCGGCCACGACCTGGACTCTCTTCAGGCTTGGAGAGC CCTGTACGATCCCCGGGCAGTTGTGCTGGTCCTTCCAGGCATCTTGGCAG GCGTGGTGCTTTCAATAGTGGCCCATTCGTTTAAGCACTTTCTCGCTTTG CCTGTGGCCATGGTCTGTGTGCCCCTCGTCTTCTACGGCGTGCTCTTCTT GGCCGGAgagagcatggagggggcgagggactTCGGCTGGGTGGGGCCCG CCAATGCACCAGCATCTTGGCAGGCCTCCGTAGCGCTCTATCAGGTCTGG CCGCCGGACTTATTAGGCCGGATCGAGTGGTGGGTGGTGCCCTACCAGCT CCCCACGTTGCTGGGAATGATCTTTGTCGTCTCCTTCAGCAGCTGCCTGG ACATCGTGGCTATCGAGATGGACAGCGGTCGGCCGCTGAACAAAAACCAC GAGCTTTCCACTGTGGGGGCCTCCAATCTCATCGCTGGTTTGTGCGGGGG GTTTACGGGCTCCTACATATTCTCCCAGACCATCTTCACGTACCGCACGC AAACTCGTTCTCGACTCTgcggcctcgtcctcatcatGGCGGAACTGGCG GTCTTTTTCTGCGATGTGGATCTCATGTCCTACATCCCGCTGTACTTTTT CGCTGCGACCCTTCATTTCATTACCTTTGAGCTGATGCTCGagtggctgg tggaggcgcggCTGCGCATGACGGCCAAGGAGTACGTGGTCCTGTGGACG ACGTTTTTGGGCAATGTGGCTTTCGGCATTATTCCCGGCTTTGCCTTGGG GATAGTGCTCTCGATGGCGATGTTTATAATTTCTTACGCCAAAAGCACCG CCCGGACTGCTCAGGCCCAGCGCCAACGCAGCCGCGTGGCGCGCCTAAGG GGTGCGCGCAGGCTTCTCGACCACGGGAAGATTTTGACGCTAGAGCTTAA CGGGGCTATATTTTTTGGAAGCAGTATCACGACCCTCGAGCACATCAAAT CCTTGTTGGGGGTAGCGCAATCCCCTTCACGGAAAGCCAAAGAACGATCG ACCGagcggagaaaaggaaagatggtGGGGTATCGTCCTTCTCGGACGCA CTCCCGACGATCACTCACCGAGCAGGCAGAAATGTGGGCTGGCGGTCAGA GCATTGGCTCTGCAGATGCTCATACGAAGTTtgcaggaagaagagtgTCG TCCAATGCTTTGACAGGGAGCAGGAACAGGACCTTTCTAAACCTTTCTAG CAGCTTGTGGACGCGCGTCTGGCACGGAGGGAGTGTTGACGCGCCTAAGG AAGCGCAGGAGGCAGCtgtggatgaagaggaagcaacaGAAGCGTCACCG CTTGTTGGTCAGTCGTCTGCTGCCTCTCTGGCGGGGCttggctcctccct tcccccctcgtcttctccgaGCCACGATGGCAGGAGTATTGGTGGCGGTG CTTCCGCAGTCACCGGTACTTACGGGACCGGAATGAAGCCATTCAGCGAA GCAATGACACAAGAAATGCAAGCGTCTGGTACTGGCGCTGCCAATCATTT TGCGAACGCCCCAAAGCCTCGCTTTCTCATACTGGATTTCCGACGGGTGC CCGCTATCGATATGTCGAGTGTTGTGAATTGCTTTTTGCCGCTGCAAACA CTCTGCAAGGACGTGCAGGTCATTCTTTGCTACAGCAATTGCAACGTCCG CGTAGAATTCTACTTAAGGGCAAACCGGCTGCTTGCAGACAACAATActc gcctctttcccaccctgcaCCAGGCGCTGGATTCCTGTGAGACGGCTTTG CTCGCTGAAGAGTCGCAGCATACTCATGGGCATTCCCTGCGAGCCCGGGC TTTCTCGTTGCGTGGAATGCAAGAGTTGAGCGTTGTGAGTGTCCTTCGGA AActgcttttggaggaggaggaagaggacggagaaggacaggagaTTGGA CCGGGAATGGCAAGTTCCGTTGATGAGGATGCGTTGGAGATGATAGCTCA CTACGCACGAGAAGAGACATTTCGCGAGGAAGATTCCATCTTCTACAAGG AAGACATCTCTGACTCTTTCTACCTCATTCTCTCTGGGGAGGTGGCTCTT GAAtcgctggaagaggacgccAGAGAGGAGCCTATGAGGGCCGCGGACCG TTTGCCCTCgtggggaggtggaagccgGGACAGGCGTCGACGGCGCGTGG AGGTTGTGCTGCATTCAGGCTCGCTCTTTGGCTTCGTGGACTTCTTTTTA GAAAACCAACGCCGGCGATTCTTCGCGCGAGCGATGACGCCTGTCAAGCT CGGTGTCTTCAGTCAGACAGCGCTCAGGCGTCTCGAGGAAGAACATCCGC GCTTGATGGTGTTGGTCCAAAAGCTCTTGCTGAAACAATTCTCTATCGAA CTCGGGAACGTATCCGTCTTGTAA back to top
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