rna2250, rna2250 (mRNA) Nannochloropsis gaditana

Overview
Namerna2250
Unique Namerna2250
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1165
Alignment locationCM002458.1:1255223..1256093 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101007g2.5031.mrna
Orig protein idgnl|cribi|Naga_101007g2.5031
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:1255223..1256093 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101007g2gene2151Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna2250rna2250-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM28432.1cds2242Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna2250 ID=rna2250|Name=rna2250|organism=Nannochloropsis gaditana|type=mRNA|length=1165bp
TTCGTCCCTGGCTCGGGGGGGAAGAACAACATCGTCATGTCCCTCATCGA
CGCCGTCGGGCTCTGGCCTACCTTCTGCGTTTGTCTGGGCACGCTTTATT
TTTGGATGTGGATTTTCGACCGTTACTACAAACGTCGGTGGCCGCATCAA
ATGCGAGGAGGGCGAGAGGGAGGGAAGGAGGGCGGGAAAAAGCGGCTCTA
CGAGAAAGGCCGACGCGGAGGGAGAGGAAGGCTGGACACAGAGGAGGAGG
AAGCGGAGCTGGAGCTGCTTGGCATCAACAAACCCCCCGCCAGCTTTCCT
CCCCCCTCCTCCCTCCCTCCCTCGGACTCAACGGAGGACCCTTTTCCACC
CCGGCCCTTGCCCTCCCTGTCCGAGCCTTCCACCATCCTCTCCAAGGCCC
ATATTAAGCGCCTGGTCGCCTCTTTGCCAGAGCGGGATGCGATGCGGAAA
TGGGTCAAAGTCTACTGCATGTCGCGCGACGGAGCCAGCCTCAGCACGCT
TCTGTACAAGGTGATGGCAGAAAGGAAGCTGAGCTCCTTCCTGCTGGTCA
TTGAAGACTCGTGGGGCTACGTCTTCGGAGGCTACTGCCCCTGTCCATTC
CAGAACGCCACGGGTTACTACGGAACCGGGGAAAGCTTCGTCTTCAAATT
CCACCCTCAGTTCACCCTCTACAAGTGGACCGGGAAGAACGATTACTTCA
TCCTATCCAATGCTCAGCATCTGGCCATGGGAGGCGGAGGCGGCTTTGCT
TTCCAGCTGGACGACGAGCTCGACACAGGTGTCTCTGGTCCCTCCGATAC
CTATGGAAATACACGCCTTTCCTCCCGGCATGTGTTCAAATGTTTGTCGA
TTGAGGTATGGGGTTTCGGGGATATTCATGACTGAGCGGGCGCGATGTGT
GAGGGCCTCTGGGGTTGCGGGGAAGTGGAAGGGAAAAATCAAGCAGGGCA
ACGGTTGCTTGAGTTGTGTGCTATGTGTTATTCGCAGGATCAAAGCCACA
CCCCAAAGAAAGAAGAGGGTGGTAATTCATCTGTTTAACAAGATCAGATA
TCTTTAATGACGATTGCTCGCACGCGCGATGCCTTAATTGCAAAACCACT
ACCCTGAGGGAGGCTCGCGCTTTTTTTCTAGACTACGCATCCATCCACAC
TAGCTGTGTATGTCC
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protein sequence of rna2250

>rna2250-protein ID=rna2250-protein|Name=rna2250|organism=Nannochloropsis gaditana|type=polypeptide|length=160bp
MSGGPKEKQHVKTQAGADDGKRRRKEHKAKQPLSLQQSNGGRGGGRGGGS
DVGRGPKAGMPAGKAFAVQGVEERKRGCGKTNGHGGRGLAKPRQEAGGTS
QPQRLAQALPQPHLSLPDSRAKEGKGDRRRGKAHGRCEIFLTPAREDRAI
EIQSPRTGES
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mRNA from alignment at CM002458.1:1255223..1256093-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna2250 ID=rna2250|Name=rna2250|organism=Nannochloropsis gaditana|type=mRNA|length=871bp|location=Sequence derived from alignment at CM002458.1:1255223..1256093- (Nannochloropsis gaditana)
ATGTCTGGAGGGCCGAAGGAAAAGCAGCATGTGAAGACTCAGGCGGGCGC
CGACGACGGGAAACGGCGGCGGAAGGAGCACAAAGCGAAACAACCGCTAA
GTCTGCAGCAGTCGAATGGAGGGAGAGGCGGGGGAAGAGGGGGAGGGAGC
GATGTAGGTCGGGGGCCCAAGGCAGGCATGCCGGCTGGGAAAGCGTTCGC
TGTCCAGGGGGTGGAGGAGCGGAAGCGAGGGTGCGGGAAAACGAACGGAC
ACGGAGGCCGGGGCCTCGCGAAGCCCCGACAGGAAGCAGGGGGAACATCG
CAGCCGCAGAGACTCGCACAGGCACTGCCACAGCCACACTTGTCTCTCCC
GGACTCTCGGGCGAAGGAGGTAGAGCCAAGCGCCGAGGCGGAGAAAGCGG
GTGGCCGGGCGAGGACGGAAGTGGAGGGGCCGAAGGGTGGAGCGGGGGGG
GGCGGGGCGGGGAAAGATCGGAAAGGAGCGGTGCCGGTGAAAGGGAAAGG
CGGCAGCGCGCGTAGACATGCCAAGGCCAAGGGTCTCCCGGGAGGAGGGA
GGGAAGGAGGGAGGGAAGGAGGGAGGGAGGGAGGGAAGAATGGAGGACGA
AAAGGTTCTGCTGCCGCGGTGGCGGCGGTGTCTCCTGCTGGAGGAGGAAG
CGGAGCCGGAGGAGGACCTGGGGAGAGGAAAGAAAATGGAGGGCACGGCG
GAACTCAAGCGGCGGCCCGATGAGTCATTGTAAAGAAGTAACGCGCGATG
GGGGTAGGGGAAGGGCGACAGGAGAAGGGGAAAAGCACACGGAAGGTGTG
AGATTTTCCTGACTCCTGCGCGCGAGGATCGGGCAATAGAAATACAATCG
CCGCGAACAGGAGAGAGTTAG
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Coding sequence (CDS) from alignment at CM002458.1:1255223..1256093-

>rna2250 ID=rna2250|Name=rna2250|organism=Nannochloropsis gaditana|type=CDS|length=966bp|location=Sequence derived from alignment at CM002458.1:1255223..1256093- (Nannochloropsis gaditana)
GGGAAGGGCGACAGGAGAAGGGGAAAAGCACACGGAAGGTGTGAGATTTT
CCTGACTCCTGCGCGCGAGGATCGGGCAATAGAAATACAATCGCCGCGAA
CAGGAGAGAGTTAGATGTCTGGAGGGCCGAAGGAAAAGCAGCATGTGAAG
ACTCAGGCGGGCGCCGACGACGGGAAACGGCGGCGGAAGGAGCACAAAGC
GAAACAACCGCTAAGTCTGCAGCAGTCGAATGGAGGGAGAGGCGGGGGAA
GAGGGGGAGGGAGCGATGTAGGTCGGGGGCCCAAGGCAGGCATGCCGGCT
GGGAAAGCGTTCGCTGTCCAGGGGGTGGAGGAGCGGAAGCGAGGGTGCGG
GAAAACGAACGGACACGGAGGCCGGGGCCTCGCGAAGCCCCGACAGGAAG
CAGGGGGAACATCGCAGCCGCAGAGACTCGCACAGGCACTGCCACAGCCA
CACTTGTCTCTCCCGGACTCTCGGGCGAAGGAGGGGAAGGGCGACAGGAG
AAGGGGAAAAGCACACGGAAGGTGTGAGATTTTCCTGACTCCTGCGCGCG
AGGATCGGGCAATAGAAATACAATCGCCGCGAACAGGAGAGAGTTAGATG
TCTGGAGGGCCGAAGGAAAAGCAGCATGTGAAGACTCAGGCGGGCGCCGA
CGACGGGAAACGGCGGCGGAAGGAGCACAAAGCGAAACAACCGCTAAGTC
TGCAGCAGTCGAATGGAGGGAGAGGCGGGGGAAGAGGGGGAGGGAGCGAT
GTAGGTCGGGGGCCCAAGGCAGGCATGCCGGCTGGGAAAGCGTTCGCTGT
CCAGGGGGTGGAGGAGCGGAAGCGAGGGTGCGGGAAAACGAACGGACACG
GAGGCCGGGGCCTCGCGAAGCCCCGACAGGAAGCAGGGGGAACATCGCAG
CCGCAGAGACTCGCACAGGCACTGCCACAGCCACACTTGTCTCTCCCGGA
CTCTCGGGCGAAGGAG
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Synonyms
Publications