rna2235, rna2235 (mRNA) Nannochloropsis gaditana

Overview
Namerna2235
Unique Namerna2235
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length701
Alignment locationCM002458.1:1225883..1227204 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100591g1.6271.mrna
Orig protein idgnl|cribi|Naga_100591g1.6271
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:1225883..1227204 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100591g1gene2137Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna2235rna2235-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM28446.1cds2227Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna2235 ID=rna2235|Name=rna2235|organism=Nannochloropsis gaditana|type=mRNA|length=701bp
CTCCCATGCAGCTGAAAGCCAACGATCCCTCCGCCCCCCGGCTCTTTGAC
GCCGTCAGGGAAGGGGATCCGCGAGCCGTGGCCACGCTCCAGCAGATGTT
CGCGGACAGATATCTGGGTGGGGTCGATCTTGATGCCTTCCAGGACAATG
AGTGGATCGAAAAGGCCCGCGCCAGGTTTTTCGCGAACGAGGATCTGCTG
CGTCTTGTGGACGACAACGACATCCTCGACATCCTCCGCAACCCCGACCT
CAAGCTTCACAAGGCAAGTGAGATGGGCAACGCCGATCCGTCACGGCTCC
TGAATTCCTTGATGGAGAGCCACGCCAGGAACCATGGAGGTGTCAAGAGG
AAAGGTCCGGCGACCGAGGGTGGGGAGAAAGAGGGACTGTGAGAGCGCCT
GCACAAAGACCGAAAAAGGCCGAGAAGCGTACGTTCCTGTCCAGCGGTAC
GGAGGGAGGGCAAGGGGCTGGGAGAAAGCGAAATGGCTAAGGAAGAGGTG
GAAGCTTTTGGTGGTGAGGCGGGCGGGAAGGCGGTCGCGTCAGGTACAGT
AGACGGGGAGGGCCGGACGGAGGGGTGGCGGCGGAACGGTCGTCGACACG
AAAGCACAAGGAGTTAACTATCACCTTTATTAAAGAAACGATCGATATGG
CTTTGAGTATAGTATCGTCTTGTCTAAGAAGCGATCGACATGGCGTTGAG
T
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protein sequence of rna2235

>rna2235-protein ID=rna2235-protein|Name=rna2235|organism=Nannochloropsis gaditana|type=polypeptide|length=192bp
MRQHVSILVIAYIFLVSMGSLVLVSGKDRRSDTLFGRTRREHGKDASNQA
QEEDLENPPPKYTFERRRLSGEEAAKAEATRIDPTYEPEMNLIQRIKAGT
FDFFTDALPEMLESVTKDEAGLIFENFKVMKTTKAWKAFQESGDTEDEEA
VASAMIKSVQEMGQIMLGARYFTKDADSVTAVTDEFPSSPNY
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mRNA from alignment at CM002458.1:1225883..1227204-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna2235 ID=rna2235|Name=rna2235|organism=Nannochloropsis gaditana|type=mRNA|length=1322bp|location=Sequence derived from alignment at CM002458.1:1225883..1227204- (Nannochloropsis gaditana)
CAGCGGAGTCGACCTCAGAACCCCTTACTAGGAGCTCCTACCATGCGACA
ACATGTCTCCATCCTGGTCATCGCCTATATTTTCCTGGTCTCGATGGGGA
GTCTGGTCCTTGTAAGTGGCAAGGACCGTCGGTCTGACACTCTTTTTGGT
AGGACGCGTCGCGAGCACGGGAAAGATGCAAGCAACCAGGCCCAGGAAGA
AGATCTAGAAAATCCGCCTCCCAAGTACACCTTCGAGCGTCGTCGATTAA
GCGGGGAAGAGGCAGCCAAGGCAGAGGCGACCAGAATTGATCCTACCTAC
GAACCAGAAATGAACCTAATTCAGTGCGTAAAATCCAACTGCACAGAGGC
AGGGAGGGTGGTAAAAGAGATGAGGCCATAAAAGGTTTTGATAAGAAACA
CTGTGCCCAACTCGGTAGCTTGGATAAAGTGACGGAGGGGGGGTTGTACA
CAATCCTTCGACCGCAAAAGGCAGGGTACCAGGTGACGCGTATCAATAGG
CTCATATCCCTCCATCTTTCTCGGCAATATACAGGAGGATCAAGGCCGGT
ACCTTCGACTTTTTCACGGATGCACTTCCAGAGATGCTCGAGTAAGTCTT
TTGGCGCACAACATGATAGTTTTGCACGTAACATAGCCCTTTGTGTTGGT
TTAAGTGTCTTTTGGGGAGGGCCTCCGGACAAATACGGGCTTGGAACCCG
GATTTTCTCCACCACCCGAGCCTCTTCCTCACGCTTTCGATTCCTGAACG
AAGCGTGTCTTATCAGTCTCACCAACCCCTTCTTTTGCGGGCAGGTCGGT
GACGAAGGATGAGGCGGGGCTGATTTTCGAAAACTTCAAGGTCATGAAGA
CCACCAAGGCGTGGAAGGCCTTCCAAGAGAGCGGTGACACCGAGGATGAG
GAAGCGGTGCGTGAGTCTTCCTTACTTTCACCTTACTTTCCCCCTCTTTC
CTCCCTCCTTCCTCCCCCTTTTCTTCTTCCTCCTCTTTCCGTCCCCGTCT
CCCTTGCCAGGCGTCCATGCAGGTCCACTCCACAGACACGTTGACATGCC
TCCACCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTC
CCTCCCTCCCTCCCTCCCTCCCACATTCCCCTTCATCCTCTCTTCAGGTG
GCCAGCGCCATGATCAAGAGCGTGCAGGAGATGGGTCAGATCATGCTGGG
TGCTCGGTATTTCACCAAGGACGCCGACTCGGTCACGGCGGTAACCGACG
AGTTCGTGCAAGATGTGAGGACGCAAGGGAGGAAAGGAGGGCTGCAGGTT
TCCGTCTTCCCCGAACTACTGA
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Coding sequence (CDS) from alignment at CM002458.1:1225883..1227204-

>rna2235 ID=rna2235|Name=rna2235|organism=Nannochloropsis gaditana|type=CDS|length=2895bp|location=Sequence derived from alignment at CM002458.1:1225883..1227204- (Nannochloropsis gaditana)
GTTTCCGTCTTCCCCGAACTACTGAGTGGCCAGCGCCATGATCAAGAGCG
TGCAGGAGATGGGTCAGATCATGCTGGGTGCTCGGTATTTCACCAAGGAC
GCCGACTCGGTCACGGCGGTAACCGACGAGTCGGTGACGAAGGATGAGGC
GGGGCTGATTTTCGAAAACTTCAAGGTCATGAAGACCACCAAGGCGTGGA
AGGCCTTCCAAGAGAGCGGTGACACCGAGGATGAGGAAGCGGAGGATCAA
GGCCGGTACCTTCGACTTTTTCACGGATGCACTTCCAGAGATGCTCGAAT
GCGACAACATGTCTCCATCCTGGTCATCGCCTATATTTTCCTGGTCTCGA
TGGGGAGTCTGGTCCTTGTAAGTGGCAAGGACCGTCGGTCTGACACTCTT
TTTGGTAGGACGCGTCGCGAGCACGGGAAAGATGCAAGCAACCAGGCCCA
GGAAGAAGATCTAGAAAATCCGCCTCCCAAGTACACCTTCGAGCGTCGTC
GATTAAGCGGGGAAGAGGCAGCCAAGGCAGAGGCGACCAGAATTGATCCT
ACCTACGAACCAGAAATGAACCTAATTCAGTTTCCGTCTTCCCCGAACTA
CTGAGTGGCCAGCGCCATGATCAAGAGCGTGCAGGAGATGGGTCAGATCA
TGCTGGGTGCTCGGTATTTCACCAAGGACGCCGACTCGGTCACGGCGGTA
ACCGACGAGTCGGTGACGAAGGATGAGGCGGGGCTGATTTTCGAAAACTT
CAAGGTCATGAAGACCACCAAGGCGTGGAAGGCCTTCCAAGAGAGCGGTG
ACACCGAGGATGAGGAAGCGGAGGATCAAGGCCGGTACCTTCGACTTTTT
CACGGATGCACTTCCAGAGATGCTCGAATGCGACAACATGTCTCCATCCT
GGTCATCGCCTATATTTTCCTGGTCTCGATGGGGAGTCTGGTCCTTGTAA
GTGGCAAGGACCGTCGGTCTGACACTCTTTTTGGTAGGACGCGTCGCGAG
CACGGGAAAGATGCAAGCAACCAGGCCCAGGAAGAAGATCTAGAAAATCC
GCCTCCCAAGTACACCTTCGAGCGTCGTCGATTAAGCGGGGAAGAGGCAG
CCAAGGCAGAGGCGACCAGAATTGATCCTACCTACGAACCAGAAATGAAC
CTAATTCAGTTTCCGTCTTCCCCGAACTACTGAGTGGCCAGCGCCATGAT
CAAGAGCGTGCAGGAGATGGGTCAGATCATGCTGGGTGCTCGGTATTTCA
CCAAGGACGCCGACTCGGTCACGGCGGTAACCGACGAGTCGGTGACGAAG
GATGAGGCGGGGCTGATTTTCGAAAACTTCAAGGTCATGAAGACCACCAA
GGCGTGGAAGGCCTTCCAAGAGAGCGGTGACACCGAGGATGAGGAAGCGG
AGGATCAAGGCCGGTACCTTCGACTTTTTCACGGATGCACTTCCAGAGAT
GCTCGAATGCGACAACATGTCTCCATCCTGGTCATCGCCTATATTTTCCT
GGTCTCGATGGGGAGTCTGGTCCTTGTAAGTGGCAAGGACCGTCGGTCTG
ACACTCTTTTTGGTAGGACGCGTCGCGAGCACGGGAAAGATGCAAGCAAC
CAGGCCCAGGAAGAAGATCTAGAAAATCCGCCTCCCAAGTACACCTTCGA
GCGTCGTCGATTAAGCGGGGAAGAGGCAGCCAAGGCAGAGGCGACCAGAA
TTGATCCTACCTACGAACCAGAAATGAACCTAATTCAGTTTCCGTCTTCC
CCGAACTACTGAGTGGCCAGCGCCATGATCAAGAGCGTGCAGGAGATGGG
TCAGATCATGCTGGGTGCTCGGTATTTCACCAAGGACGCCGACTCGGTCA
CGGCGGTAACCGACGAGTCGGTGACGAAGGATGAGGCGGGGCTGATTTTC
GAAAACTTCAAGGTCATGAAGACCACCAAGGCGTGGAAGGCCTTCCAAGA
GAGCGGTGACACCGAGGATGAGGAAGCGGAGGATCAAGGCCGGTACCTTC
GACTTTTTCACGGATGCACTTCCAGAGATGCTCGAATGCGACAACATGTC
TCCATCCTGGTCATCGCCTATATTTTCCTGGTCTCGATGGGGAGTCTGGT
CCTTGTAAGTGGCAAGGACCGTCGGTCTGACACTCTTTTTGGTAGGACGC
GTCGCGAGCACGGGAAAGATGCAAGCAACCAGGCCCAGGAAGAAGATCTA
GAAAATCCGCCTCCCAAGTACACCTTCGAGCGTCGTCGATTAAGCGGGGA
AGAGGCAGCCAAGGCAGAGGCGACCAGAATTGATCCTACCTACGAACCAG
AAATGAACCTAATTCAGTTTCCGTCTTCCCCGAACTACTGAGTGGCCAGC
GCCATGATCAAGAGCGTGCAGGAGATGGGTCAGATCATGCTGGGTGCTCG
GTATTTCACCAAGGACGCCGACTCGGTCACGGCGGTAACCGACGAGTCGG
TGACGAAGGATGAGGCGGGGCTGATTTTCGAAAACTTCAAGGTCATGAAG
ACCACCAAGGCGTGGAAGGCCTTCCAAGAGAGCGGTGACACCGAGGATGA
GGAAGCGGAGGATCAAGGCCGGTACCTTCGACTTTTTCACGGATGCACTT
CCAGAGATGCTCGAATGCGACAACATGTCTCCATCCTGGTCATCGCCTAT
ATTTTCCTGGTCTCGATGGGGAGTCTGGTCCTTGTAAGTGGCAAGGACCG
TCGGTCTGACACTCTTTTTGGTAGGACGCGTCGCGAGCACGGGAAAGATG
CAAGCAACCAGGCCCAGGAAGAAGATCTAGAAAATCCGCCTCCCAAGTAC
ACCTTCGAGCGTCGTCGATTAAGCGGGGAAGAGGCAGCCAAGGCAGAGGC
GACCAGAATTGATCCTACCTACGAACCAGAAATGAACCTAATTCA
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Synonyms
Publications