rna2204, rna2204 (mRNA) Nannochloropsis gaditana

Overview
Namerna2204
Unique Namerna2204
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length531
Alignment locationCM002458.1:1158541..1158816 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101096g2.4074.mrna
Orig protein idgnl|cribi|Naga_101096g2.4074
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:1158541..1158816 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101096g2gene2107Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM28477.1cds2196Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna2204rna2204-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna2204 ID=rna2204|Name=rna2204|organism=Nannochloropsis gaditana|type=mRNA|length=531bp
ATGACCGCCGTCGCGGTCGCGTACAAGAACCGGATGGAGCTCGCCATGGG
CATCGCCGTGGGCTCCGCCACCCAGATCAGCGTTTTCGTCATCCCCTTCC
TCGTCATCGCTGGATGGATCATGGATAAGCCCATGACCCTGAATTTTACG
CATGTTGAGCTCATCCTTTACATCATGAGCGTCATCATTACCATCCCCCG
CGGGGAGCAGCAACTGGATCCACGGCTCCCTCCTCATCACGTGCTACATA
TTCATCTCCTTCGCCATCTGGCACGAGAGCGAGACCCCATTGACCGGGGC
GGGCGCGACGAGGCGCCTGCCGGGCTCGTGGGAGGGCTTATGAGGGCGAG
GGAGGGAGGGAGGGAGGGAGGGAAGGAAGGGGGCCGTGGGACGCCCTCCT
CAGGGGTTGAATGGGTCCGTGCTCGTCTTGCACACTTGCACATGTATCTT
AAAAGGATGGTGATGAAGAGGGAAGGGTACATAGAAGATGCAAATAGGTG
GAGCAAGCCCACTGAACAGGCATGCGTGTAA
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protein sequence of rna2204

>rna2204-protein ID=rna2204-protein|Name=rna2204|organism=Nannochloropsis gaditana|type=polypeptide|length=91bp
MQERTSKGSSPNRAATAAPYRTRRCGPDGPVSAEKRADRIEAMDREEGRM
ERREGRRETAAAVGRKFERNGCVTAANRCLCAGMPASKHCT
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mRNA from alignment at CM002458.1:1158541..1158816-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna2204 ID=rna2204|Name=rna2204|organism=Nannochloropsis gaditana|type=mRNA|length=276bp|location=Sequence derived from alignment at CM002458.1:1158541..1158816- (Nannochloropsis gaditana)
ATGCAGGAGCGAACATCGAAAGGCTCTTCGCCCAACAGGGCTGCCACGGC
GGCGCCCTATAGAACCCGACGTTGTGGACCAGACGGGCCCGTCTCTGCGG
AGAAACGAGCGGATCGGATCGAGGCCATGGACAGGGAGGAAGGGCGCATG
GAGCGTCGGGAGGGGAGGAGGGAAACGGCAGCTGCAGTTGGGCGAAAGTT
CGAGAGAAATGGATGCGTGACTGCTGCGAACAGGTGCTTGTGTGCCGGAA
TGCCCGCATCTAAACACTGCACATAG
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Coding sequence (CDS) from alignment at CM002458.1:1158541..1158816-

>rna2204 ID=rna2204|Name=rna2204|organism=Nannochloropsis gaditana|type=CDS|length=276bp|location=Sequence derived from alignment at CM002458.1:1158541..1158816- (Nannochloropsis gaditana)
ATGCAGGAGCGAACATCGAAAGGCTCTTCGCCCAACAGGGCTGCCACGGC
GGCGCCCTATAGAACCCGACGTTGTGGACCAGACGGGCCCGTCTCTGCGG
AGAAACGAGCGGATCGGATCGAGGCCATGGACAGGGAGGAAGGGCGCATG
GAGCGTCGGGAGGGGAGGAGGGAAACGGCAGCTGCAGTTGGGCGAAAGTT
CGAGAGAAATGGATGCGTGACTGCTGCGAACAGGTGCTTGTGTGCCGGAA
TGCCCGCATCTAAACACTGCACATAG
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Synonyms
Publications