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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100058g9.4273.mrna |
| Orig protein id | gnl|cribi|Naga_100058g9.4273 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002458.1 | supercontig | CM002458.1:1088597..1091084 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2182 ID=rna2182|Name=rna2182|organism=Nannochloropsis gaditana|type=mRNA|length=1332bp
ATGCCTAAAAATAATTACAAAGGAGTAGTGTCATGCCTATGTGTGCATGT
TGAAGTTGTACCTGTGTGCAACAAGGGGTGGGACCGCGCTGTATATGATG
TGAAGGCTTCCTCGTTCTCGTACACTATGAAAAATATCAGTGTAGAGGCT
CGTGATACATGTGTAGTCAACTGTCGGGATACAATCGCTCGGATTCGCGA
TATTCAAGCACAGAGTATACCTTTTAAAACAAGCCTCTACAGAATGCCCA
AGGGTAGGAAGCGTCGCGTCCCTGATGTTGCGGAAGACGAGGAAGAAGCG
GAGACAGAGACCTGTCGGGCTCCCGGTAATGAAGACCGCGAGGACGAGGC
GGACGCCGACCGCGAAAAAGAGCACGAGAAGGAAAACACAAGTCTTGTCG
GCAAGAGTATAAGAGCATCGACACGTGCTTCTAGAATGACAACGGCGGTG
GTGGAGGACGACGCGTCTGAGGACGAGAAACTAGAGGAGGAGGAGGATAA
GACATCAAGACGGGGAAAGGGGGCTCGACCCCAGTCGAGACACTTAAGTA
GCCGCAAGAGGCAACCCCCCATGAAAGCCTCACAAGATGGAAACTACTAC
TGTCAAACTCCCGTGGAAACGCTGTTCTCATTTACCCAGACGGAGGACGG
TCCCGTGATAAACCAACGGGAGGCACAGGCTAGTCAATGCGAAATGCGGC
CCCAAGACGAGAAACAATTCCAGGGCCTGAGCCAAGACCAACAAAAGGTG
GTAGTTTCTGAGGCAATTAGATACATTTTCTTCAAGGCCGCACGCCGGGA
ACCAGTGCATCGACAGAAGCTCCACGATGAAGTCGTCAAAAAATACGGCA
AAGCCCTCGTCCGTCCCGTGTTGAAGGCAGCGGCCGAGCAGCTCGAATCG
ATATTTGGCTACACGCTGGTGACTCCGCCTGCCTATCGTTTCCCCCGAGA
TGCGGACCAGGAATCGTACTACCTGATAACTTCCATCCGATCTCACTCCC
TGAGCAAGGCGATGAACGCCTATGGGAAAGATGTGGCCTATCGGGGTTTC
TGCATGCTCGTGATGGGCCTGGTCTTCTGCGCGCAGAACAAAATTCCCGA
GCAGGTCCTCTTCAAACAGTTGCAGGAGGCTCAGGATGGCTTGGAACTTG
TGTCGAAGAGCCAAGCAGGAGGGGGGGGGGCGAGGGGGGGTATGCGATTC
ACGGTGCCTTGGACGGGAAATGATGGGCTAAGAGGAAGCCCCTGTCAAGA
CGGAACGGGAGCACAAGCGTGGTCAAAAATGCGAGGAGCGACACCGGTTT
CCGCGTCGAGATGGTTTGACTGGCTAGTTTGA back to topprotein sequence of rna2182 >rna2182-protein ID=rna2182-protein|Name=rna2182|organism=Nannochloropsis gaditana|type=polypeptide|length=595bp
MEWKALSTLGTAKRGRHTEGGRTGNAVGAPAAQRTVSKTCLAIALTISVL
IRIEAEARKAAGPCLFLPPLQGSFRNCDMTVQPFIIASCPFFLRCTSGIR
STPKVRTWHSRRDLAMKGEGDAKRVSDFPFRIFAFGKKKKTAAVKEPPPG
SKNINKQSKRRKPSAKEDKGGRGFFSIIDTGRADRNSPKPAGRGKGRRGK
KDGQTGWFSSLLYPWSGFAAFNTEWKEQMVLAKRIKKLEKEVARDSTRGQ
RAKVAQYRYDALKTLEEVEAARAGRSSGEGGSFDPALAGKSRKSLQLEVE
DAMLLRQSPSAKPSGSKAGAKKGLGPGGEVLVRPEDADGLLHQLEASAKS
EQRWARLASAGIGASLGVALLPSHDVWAGMVGGGLAAFLTTTPGIVGDAT
RMAGYSAVSVGKAASALEQKCAVLDKLRGTLWKKSEASGPFLRFEFPFLA
SWRNAYGGEGFLHPGIRPAPPMRDAQYVEYLQEVKRWVEVEEQEVLQALR
RKEDERVRDVMEREERRERMQQVVGGLWQGGAAAATKLKTLLVSSATEGG
KEGRWEEPGGEGGMEDDLAFLKRFSDLDVKAGRTGRAWEEGLAKE back to topmRNA from alignment at CM002458.1:1088597..1091084- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2182 ID=rna2182|Name=rna2182|organism=Nannochloropsis gaditana|type=mRNA|length=2488bp|location=Sequence derived from alignment at CM002458.1:1088597..1091084- (Nannochloropsis gaditana)
CATTTACACGCGATGTCTAACTGATTGTCTTCACACTATAATTTGTCCTG
GCGCGGGCCTGATGGCAGCTGTTGGGCAGGAGCATGGAATGGAAGGCCTT
ATCAACACTTGGCACGGCAAAAAGGGGCCGACACACAGAAGGCGGACGGA
CAGGAAATGCGGTGGGTGCTCCTGCAGCGCAGAGGACAGTGTCCAAGACC
TGCTTGGCCATTGCTCTGACGATAAGCGTGCTCATAAGAATAGAGGCCGA
GGCCCGCAAGGCGGCCGGACCTTGTCTTTTTCTGCCCCCTCTCCAAGGTT
GGTGCACCCCGGAATGCATCATGGATGCACATCTAAATTAAGAATTTATG
GAATATCTCGTGTATATGACATCTCGGAGAGAGTAAAATATGTCGCGCGA
GGGTGTGCACGCCCGAAGTCCGTTCTGTGCCCGCTGTTTTGTGCCCGCCA
GACCGAATACGTGACGACATACCCCATTCCACGCTGGCTCTTCAATCAAT
AGGTTCTTTTCGAAACTGTGACATGACGGTGCAGCCTTTCATCATCGCCA
GTTGTCCCTTTTTTCTTCGTTGTACTTCGGGGATACGTAGCACTCCCAAA
GTGCGAACATGGCATTCGCGGCGGGATCTGGCCATGAAAGGTGAAGGCGA
TGCGAAGCGCGTATCCGACTTTCCCTTTCGCATCTTTGCATTTGGTAAAA
AGAAAAAGACTGCCGCTGTAAAAGAGCCCCCTCCAGGCAGCAAAAACATC
AACAAACAATCCAAACGTCGAAAGCCATCGGCCAAGGAGGACAAGGGCGG
GCGCGGGTTCTTTTCAATCATCGACACGGGCCGCGCGGACAGGAATTCTC
CAAAACCGGCAGGGAGGGGGAAAGGCCGACGTGGGAAAAAAGATGGACAG
ACGGGCTGGTTTTCGTCCCTTTTGTACCCGTGGAGTGGCTTCGCCGCCTT
CAATACCGAGTGGAAGGAGCAGATGGTCTTGGCGAAGCGCATCAAGAAGT
TGGAGAAAGAAGTGGCGAGGGACTCCACACGCGGGCAACGGGCAAAGGTG
GCCCAGTACCGGTACGACGCGCTCAAGACCTTGGAAGAGGTGGAAGCCGC
GCGGGCGGGAAGGAGTAGCGGGGAGGGGGGTTCCTTCGACCCGGCCCTGG
CAGGCAAGAGCCGCAAAAGCCTCCAACTCGAGGTGGAAGACGCCATGCTA
CTCCGACAGAGCCCCTCCGCCAAGCCCTCAGGCTCCAAGGCCGGCGCCAA
GAAGGGGTTGGGGCCGGGGGGGGAGGTGCTGGTGCGTCCCGAGGACGCAG
ACGGGCTCTTGCACCAGCTGGAGGCGTCCGCCAAGAGTGAACAGCGGTGG
GCTCGTTTGGCTTCTGCGGGGATCGGGGCGAGTCTGGGGGTGGCCTTGCT
CCCGTCGCACGACGTGTGGGCGGGAATGGTGGGTGGAGGCCTGGCTGCTT
TCCTGACCACGACTCCGGGTATCGTGGGGGACGCCACCCGCATGGCAGGA
TACAGTGCAGTGAGCGTAGGCAAGGCAGCTTCGGCGTTGGAACAAAAATG
TGCCGTCCTGGACAAACTTCGGGGCACGCTCTGGAAAAAGTCCGAGGCCT
CGGGCCCCTTTCTGAGGTTTGAATTTCCGTTTTTGGCCAGCTGGCGCAAC
GCGTACGGAGGGGAGGGGTTTTTGCACCCGGGCATTCGACCGGCACCCCC
CATGCGGGACGCCCAGTACGTGGAATATCTGCAGGAGGTGAAGCGTTGGG
TGGAGGTGGAGGAACAAGAGGTTTTGCAGGCCCTGCGGAGGAAGGAGGAC
GAGCGGGTCAGGGATGTGATGGAACGGGAAGAGAGGCGGGAGAGGATGCA
GCAGGTAGTGGGAGGGTTGTGGCAGGGAGGCGCGGCCGCGGCGACGAAGC
TGAAGACTTTGTTGGTGAGTAGTGCGACGGAAGGCGGGAAGGAAGGGAGG
TGGGAAGAGCCTGGGGGGGAGGGAGGTATGGAGGACGACCTGGCTTTCCT
CAAGCGGTTCTCGGACTTGGACGTGAAGGCCGGAAGGACCGGGAGGGCCT
GGGAGGAAGGCCTGGCGAAGGAGTAGGACGGGGCAATGGGAGCCAAAAGG
ATGCGGTGACCGGCGCCAGGAAGGAGATTTGAAGGCGATGGAGAGGAGGG
GCGAGGCCAGAGGAGATAAGGAGGGCCCGGACGGAGTCGGCGGGCAGGCT
GGTGGTGGAGGAATCGACACGTAGGTGGCACCGAGGAGGAGAGGAGAGGC
AAAGAGGAAGACGGAGGGGGAGGGGAGGATTATGAGCGTGCGAGAGGTGC
ATGGACCGGCACGTGTGTACATGTGTAGATTTTCGCAAACACGGGTAGGA
ACGGGATTTGATTCTTTGGGGGCGCGTTGGGTGGTGCGAAGCGTACGGGT
GTACAATGTGTAAGCCAGGAGCAATTTCAAACTAGCCAGTCAAACCATCT
CGACGCGGAAACCGGTGTCGCTCCTCGCATTTTTGACC back to topCoding sequence (CDS) from alignment at CM002458.1:1088597..1091084- >rna2182 ID=rna2182|Name=rna2182|organism=Nannochloropsis gaditana|type=CDS|length=3576bp|location=Sequence derived from alignment at CM002458.1:1088597..1091084- (Nannochloropsis gaditana)
GTTCTTTTCGAAACTGTGACATGACGGTGCAGCCTTTCATCATCGCCAGT
TGTCCCTTTTTTCTTCGTTGTACTTCGGGGATACGTAGCACTCCCAAAGT
GCGAACATGGCATTCGCGGCGGGATCTGGCCATGAAAGGTGAAGGCGATG
CGAAGCGCGTATCCGACTTTCCCTTTCGCATCTTTGCATTTGGTAAAAAG
AAAAAGACTGCCGCTGTAAAAGAGCCCCCTCCAGGCAGCAAAAACATCAA
CAAACAATCCAAACGTCGAAAGCCATCGGCCAAGGAGGACAAGGGCGGGC
GCGGGTTCTTTTCAATCATCGACACGGGCCGCGCGGACAGGAATTCTCCA
AAACCGGCAGGGAGGGGGAAAGGCCGACGTGGGAAAAAAGATGGACAGAC
GGGCTGGTTTTCGTCCCTTTTGTACCCGTGGAGTGGCTTCGCCGCCTTCA
ATACCGAGTGGAAGGAGCAGATGGTCTTGGCGAAGCGCATCAAGAAGTTG
GAGAAAGAAGTGGCGAGGGACTCCACACGCGGGCAACGGGCAAAGGTGGC
CCAGTACCGGTACGACGCGCTCAAGACCTTGGAAGAGGTGGAAGCCGCGC
GGGCGGGAAGGAGTAGCGGGGAGGGGGGTTCCTTCGACCCGGCCCTGGCA
GGCAAGAGCCGCAAAAGCCTCCAACTCGAGGTGGAAGACGCCATGCTACT
CCGACAGAGCCCCTCCGCCAAGCCCTCAGGCTCCAAGGCCGGCGCCAAGA
AGGGGTTGGGGCCGGGGGGGGAGGTGCTGGTGCGTCCCGAGGACGCAGAC
GGGCTCTTGCACCAGCTGGAGGCGTCCGCCAAGAGTGAACAGCGGTGGGC
TCGTTTGGCTTCTGCGGGGATCGGGGCGAGTCTGGGGGTGGCCTTGCTCC
CGTCGCACGACGTGTGGGCGGGAATGGTGGGTGGAGGCCTGGCTGCTTTC
CTGACCACGACTCCGGGTATCGTGGGGGACGCCACCCGCATGGCAGGATA
CAGTGCAGTGAGCGTAGGCAAGGCAGCTTCGGCGTTGGAACAAAAATGTG
CCGTCCTGGACAAACTTCGGGGCACGCTCTGGAAAAAGTCCGAGGCCTCG
GGCCCCTTTCTGAGGTTTGAATTTCCGTTTTTGGCCAGCTGGCGCAACGC
GTACGGAGGGGAGGGGTTTTTGCACCCGGGCATTCGACCGGCACCCCCCA
TGCGGGACGCCCAGTACGTGGAATATCTGCAGGAGGTGAAGCGTTGGGTG
GAGGTGGAGGAACAAGAGGTTTTGCAGGCCCTGCGGAGGAAGGAGGACGA
GCGGGTCAGGGATGTGATGGAACGGGAAGAGAGGCGGGAGAGGATGCAGC
AGGTAGTGGGAGGGTTGTGGCAGGGAGGCGCGGCCGCGGCGACGAAGCTG
AAGACTTTGTTGGTGAGTAGTGCGACGGAAGGCGGGAAGGAAGGGAGGTG
GGAAGAGCCTGGGGGGGAGGGAGGTATGGAGGACGACCTGGCTTTCCTCA
AGCGGTTCTCGGACTTGGACGTGAAGGCCGGAAGGACCGGGAGGGCCTGG
GAGGAAGGCCTGGCGAAGGAGTAGATGGAATGGAAGGCCTTATCAACACT
TGGCACGGCAAAAAGGGGCCGACACACAGAAGGCGGACGGACAGGAAATG
CGGTGGGTGCTCCTGCAGCGCAGAGGACAGTGTCCAAGACCTGCTTGGCC
ATTGCTCTGACGATAAGCGTGCTCATAAGAATAGAGGCCGAGGCCCGCAA
GGCGGCCGGACCTTGTCTTTTTCTGCCCCCTCTCCAAGGTTCTTTTCGAA
ACTGTGACATGACGGTGCAGCCTTTCATCATCGCCAGTTGTCCCTTTTTT
CTTCGTTGTACTTCGGGGATACGTAGCACTCCCAAAGTGCGAACATGGCA
TTCGCGGCGGGATCTGGCCATGAAAGGTGAAGGCGATGCGAAGCGCGTAT
CCGACTTTCCCTTTCGCATCTTTGCATTTGGTAAAAAGAAAAAGACTGCC
GCTGTAAAAGAGCCCCCTCCAGGCAGCAAAAACATCAACAAACAATCCAA
ACGTCGAAAGCCATCGGCCAAGGAGGACAAGGGCGGGCGCGGGTTCTTTT
CAATCATCGACACGGGCCGCGCGGACAGGAATTCTCCAAAACCGGCAGGG
AGGGGGAAAGGCCGACGTGGGAAAAAAGATGGACAGACGGGCTGGTTTTC
GTCCCTTTTGTACCCGTGGAGTGGCTTCGCCGCCTTCAATACCGAGTGGA
AGGAGCAGATGGTCTTGGCGAAGCGCATCAAGAAGTTGGAGAAAGAAGTG
GCGAGGGACTCCACACGCGGGCAACGGGCAAAGGTGGCCCAGTACCGGTA
CGACGCGCTCAAGACCTTGGAAGAGGTGGAAGCCGCGCGGGCGGGAAGGA
GTAGCGGGGAGGGGGGTTCCTTCGACCCGGCCCTGGCAGGCAAGAGCCGC
AAAAGCCTCCAACTCGAGGTGGAAGACGCCATGCTACTCCGACAGAGCCC
CTCCGCCAAGCCCTCAGGCTCCAAGGCCGGCGCCAAGAAGGGGTTGGGGC
CGGGGGGGGAGGTGCTGGTGCGTCCCGAGGACGCAGACGGGCTCTTGCAC
CAGCTGGAGGCGTCCGCCAAGAGTGAACAGCGGTGGGCTCGTTTGGCTTC
TGCGGGGATCGGGGCGAGTCTGGGGGTGGCCTTGCTCCCGTCGCACGACG
TGTGGGCGGGAATGGTGGGTGGAGGCCTGGCTGCTTTCCTGACCACGACT
CCGGGTATCGTGGGGGACGCCACCCGCATGGCAGGATACAGTGCAGTGAG
CGTAGGCAAGGCAGCTTCGGCGTTGGAACAAAAATGTGCCGTCCTGGACA
AACTTCGGGGCACGCTCTGGAAAAAGTCCGAGGCCTCGGGCCCCTTTCTG
AGGTTTGAATTTCCGTTTTTGGCCAGCTGGCGCAACGCGTACGGAGGGGA
GGGGTTTTTGCACCCGGGCATTCGACCGGCACCCCCCATGCGGGACGCCC
AGTACGTGGAATATCTGCAGGAGGTGAAGCGTTGGGTGGAGGTGGAGGAA
CAAGAGGTTTTGCAGGCCCTGCGGAGGAAGGAGGACGAGCGGGTCAGGGA
TGTGATGGAACGGGAAGAGAGGCGGGAGAGGATGCAGCAGGTAGTGGGAG
GGTTGTGGCAGGGAGGCGCGGCCGCGGCGACGAAGCTGAAGACTTTGTTG
GTGAGTAGTGCGACGGAAGGCGGGAAGGAAGGGAGGTGGGAAGAGCCTGG
GGGGGAGGGAGGTATGGAGGACGACCTGGCTTTCCTCAAGCGGTTCTCGG
ACTTGGACGTGAAGGCCGGAAGGACCGGGAGGGCCTGGGAGGAAGGCCTG
GCGAAGGAGTAGATGGAATGGAAGGCCTTATCAACACTTGGCACGGCAAA
AAGGGGCCGACACACAGAAGGCGGACGGACAGGAAATGCGGTGGGTGCTC
CTGCAGCGCAGAGGACAGTGTCCAAGACCTGCTTGGCCATTGCTCTGACG
ATAAGCGTGCTCATAAGAATAGAGGCCGAGGCCCGCAAGGCGGCCGGACC
TTGTCTTTTTCTGCCCCCTCTCCAAG back to top
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