rna214, rna214 (mRNA) Nannochloropsis gaditana

Overview
Namerna214
Unique Namerna214
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length2281
Alignment locationCM002455.1:544144..544502 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100013g1.9781.mrna
Orig protein idgnl|cribi|Naga_100013g1.9781
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:544144..544502 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100013g1gene205Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM30493.1cds214Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna214rna214-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna214 ID=rna214|Name=rna214|organism=Nannochloropsis gaditana|type=mRNA|length=2281bp
AGAGGCAGGAATCGCCTCCCCCTCCGCTCAATCGACGTCGCGCACTTCAA
CAAGCAATGCGCATCGAGGTAGGGGAAAAGTTCCAAGACCTTAGACGATC
ATTACGATAGCTCACAGCTTCTACGGCACCTACACACAGGAAAGGAGATT
AGAGGACTGTTGCTACTCCAGCGCACGAGTTTCCCGCGCATTGAACGAAA
ATGCCATGCGGACCAAGTCTTGTGGTGGGGCTGAGTCGCCATGAGTCTCC
CCGCCGCCTGATGCCTTGGTCTATCTCGATTATCATCTGCTTGGTCGCCC
TTATGAAAATTGTTCATGGATTTGTACCTCCTTCAAAACGGCCATCATCG
ACTCAAATAGGACGCTGCCGTAGGCAGGCTCGATTGCGTACAGTCTTCAG
CATGAGCTCCATTTCTGCATCCGGATCTACCGCAAGATCAAGAAATTTTT
TGACAAATGATATTCCTTTTCAGCTTTATAACACGGCTTCTCGGAAAAAA
GAGCCCTTCAAGACCGGACAACCGGGCAAGGTTTCATTTTACAGCTGTGG
GCCTACCATATACGATTTCGCGCACATCGGGAACTTCAGGGCATTTCTGA
CGTACGACGTCTTGAAACGATGGCTCCTGTATTCGGGCTACGACGTCGAG
CACGTTTGCAATCTAACGGACGTGGATGACAAGATCATCAAGCGCATGGC
TCGCGACGGGCTGTCCCTCCCAGAACTCACCGATAAGTTCGCGCGGGTTT
TCTTCGAGGACTTGCAGGCATTAAACGTGCTACCGGCCAGCCACTACCCG
CGAGCCACGGAGCACATCCAGGACATCGTCAGCATGGTGCAGGCGCTGGT
CGACCGCGGCTACGCGTACGAGAGTCAAGGCTCCTTCTATTTCCGTGTCA
GCCGGTTTCCGAGCTACGGAAGCCTCGCGAAGCTGGACTTCAGCGGCATG
GAGATGGGCGCCGCTAAGGGCGGAGGGATCAGCGACGCGGACGAGTACGT
GGCAGACAAAGGGGACGCGAAAGATTTCGCGCTCTGGAAGGCCTACAAGG
CAGAGGACGGGCCCGTCTTTTGGGAGACGGCTTTGGGAAAAGGCCGCCCA
GGGTGGCACATTGAATGTAGCGCCATGGCGCGCCGCTTCCTGGGCCCCAC
GGTGGATTTGCACGCCGGAGGCGTTGACTTGGTCTTTCCCCACCACGAGA
ACGAGATTGCTCAGTCGGAGGGAGCGAGCGGCGAGCGCTTTTGTCGGTGC
TGGGTGCACAACGGCTTTGTGAATGTGGAGAACGAAAAGATGTCGAAGAG
CAAGGGCAACTTCTTGACCCTGCGGGGAAGCTTGGAGACGGGCCTGGACG
TGCGGGCTTTCCGGTACCTGGTCGTCACGTCGCAATACCGGATGCCTCTC
AATTTTAACACCGAGGGGCTGGCAGGGGCGCGGAAGACGATTCTTCGTTT
GGACAAGGTCAAAGCGGCTTTGACGCGGGTCGCGCGGGAAGGGAAGGGGG
CGGAGGAAGGGGGGGAGATAGACGAGGAGATGCAGGGGGTGATTGACAAG
GCTGTGGCTGGATTTGAGGCTGGCATGGCGGATGATTTGAACACGCCGCG
GGCAGCGGCAGCGCTTTTCACTCTGGTGAAAGCCACAGAGAAAGCTCTGA
AAGGAGACTCGCCCAGGCTCAGACCGTCCGGAGCTCGCCTCGTGCTTGCC
ACTTTGGAGCAGATGGACGCAGTCTTGGGGATATTTTACGAGCCTCCGCT
CATGGAAGGGGAGAAGGAGGGAGGGAGGGAGGAGGGGGCGCCGGTTGTCG
TGGAGCTTGCCGACGTGCCGAAGGAAGCTCAGGAATTGGTGATGAGGCGG
GCAGAGGCGAAGGAGAAGAGAGAGTGGGCACTGGCCGATGAAAATCGGGA
TCTGCTTCGGTCTCGGTTCGGCCTCATTCTGAAAGACAAGAAAGGCGGGG
CGGTCGAGATAGTGAGGGAGTGAGGGGGGGGGTGGAAGGTCGTGAAGCAA
CGACCTGCATAAGTCATGATGAAACCGAATGCGGGAGACCTCCGTGACGT
GTGTTTACGCCCGCATGGCACCAAACAAATAATAAAGTACGCATGTTCAG
ATGTTGCGGGAATCTATCAGACGTTTGAATCCACCCCCTTCGTCTGCTAG
GGCGCTATTGTTGTTATCCTGATATTGCTTTTTCGTTCCTTTCTCTTTCT
CTCTATGACCCTTGCCGAAAAGGCGCACACCTTGCAATGCCTCTCAGACG
ATTCAGAGATGTGAGACCGTCTTCTCCGCGA
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protein sequence of rna214

>rna214-protein ID=rna214-protein|Name=rna214|organism=Nannochloropsis gaditana|type=polypeptide|length=73bp
MPIANWRQGRKVQAGPRVHVSEHGRRRVSSRRRRSHISESSERHCKVCAF
SARVIERKRKERKSNIRITTIAP
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mRNA from alignment at CM002455.1:544144..544502-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna214 ID=rna214|Name=rna214|organism=Nannochloropsis gaditana|type=mRNA|length=359bp|location=Sequence derived from alignment at CM002455.1:544144..544502- (Nannochloropsis gaditana)
TGGAGGTCGGAGACGAGGGAGCGATGCAGGATGCCGATTGCGAACTGGCG
ACAAGGGAGGAAAGTTCAAGCAGGTCCACGCGTGCATGTAAGCGAGCATG
GGAGGCGGAGGGTGTCTTCGCGGAGAAGACGGTCTCACATCTCTGAATCG
TCTGAGAGGCATTGCAAGGTGTGCGCCTTTTCGGCAAGGGTCATAGAGAG
AAAGAGAAAGGAACGAAAAAGCAATATCAGGATAACAACAATAGCGCCCT
AGCAGACGAAGGGGGTGGATTCAAACGTCTGATAGATTCCCGCAACATCT
GAACATGCGTACTTTATTATTTGTTTGGTGCCATGCGGGCGTAAACACAC
GTCACGGAG
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Coding sequence (CDS) from alignment at CM002455.1:544144..544502-

>rna214 ID=rna214|Name=rna214|organism=Nannochloropsis gaditana|type=CDS|length=222bp|location=Sequence derived from alignment at CM002455.1:544144..544502- (Nannochloropsis gaditana)
ATGCCGATTGCGAACTGGCGACAAGGGAGGAAAGTTCAAGCAGGTCCACG
CGTGCATGTAAGCGAGCATGGGAGGCGGAGGGTGTCTTCGCGGAGAAGAC
GGTCTCACATCTCTGAATCGTCTGAGAGGCATTGCAAGGTGTGCGCCTTT
TCGGCAAGGGTCATAGAGAGAAAGAGAAAGGAACGAAAAAGCAATATCAG
GATAACAACAATAGCGCCCTAG
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Synonyms
Publications