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Properties
| Property Name | Value |
|---|
| Product | methyltransferase small |
| Orig transcript id | gnl|cribi|Naga_100009g22.640.mrna |
| Orig protein id | gnl|cribi|Naga_100009g22.640 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002458.1 | supercontig | CM002458.1:965315..967980 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2139 ID=rna2139|Name=rna2139|organism=Nannochloropsis gaditana|type=mRNA|length=2262bp
CTCCAACGTTGGGCATGGCATTGTCAGCGTCACCTGCCTTGCTGGTTGGA
TTGCTTTTTCTGCTTGCCGTGACATGGAAGGGCTCGGCGGCAGGAGCGGC
AGAGGTCGTACCCGACCAGTGGCGCGAGTTTGAGGTACCTGTCGTGCCGG
AAGACAAGGTAAGGACACACAACTCAATACATCTGGTCGGTTTCCTGCCC
ATCAATATTTCTGGGCAAGCCGGGGACATTATGCGACAAAAACGAGACAG
GGGAAAGGGTTTTACGGGTCGGCATTCCTCTGAAACATAATCCCACTACC
TGTTTTGCGTAGTACAAGAGCCTCAGCCATGATGTGCTTTGTCCGCCTTT
CATGAACATGTGTACCTTTTATCTCCCCAGGACTACACACAAATCAAGTT
AAACCGACTGCGCGACGAATATGTAGCCGTGAATCGACAAACAGACCCTG
CCATCACTGCCGAGCTCCTGGTAGGAGACATGCTGGAGAGCAAGGGATAT
ACCCCCGAGGAAATTTATGCGGTGCAAGGGGTGGTGGCGGTATTGGTTAA
TGCCGGTGTTCTAACGGTCCATGCCGAGAAACTTGAGGCTGCCGACCTGT
CCGAGCTGACCACGGCCACAAGCACCACGGGAACTCCTAAGCGCCGGCTT
CAAAGCAACGTCGGTTGCTGCCCCTGTAGCCCGGATCGCCACACAAATCC
TCCAAACTTGGTTCACACGAAAGACGAGGAAATCAAGCACGTCGCTTTTA
ACTTGACTGACGACGGCGCTAGCCCGCCTGCCCACCCCATGAACGCGGCT
CCCACGCCGGACAGGACAGACCCCAGGGCTTGCGAACGGACGCTGTTGGG
TTGTGAAAAGAAAAGCGTGCAACTAGCGGCGGATCGGCGTTCGATGTATA
AGTCTATGAAAGCCATGGGGCAGGCTCTCCGACGCACTGCAGCTGCTCGT
TCCTATTACTTGTTCGTCAAGGACGAAGTTCACAGTTTTGAAGACTTTGA
GGCGTTGAGCAAGTCGGAGCAGGAGGCGACACGACAAGAACTGGCGACCC
AGCTACTGTTGACATGCAAAGAATACGGACTGCAGGGGGTCGAGCTGCAG
GAATATGCGCGTGCCTTGGGCATGGAGGTGCCTGACTTGACCAAAACCTC
TGACGCGGAGCTGGAGAACTTAGGAAGAGAGATGGCGGCACAACACCTGC
TTGAAAATGTCGCAAAATCCATGGGGAAGGACCTGGGAAAAGAGGGCTTG
GTGCGATTTCGGGACACGTTCGGGGACGCCGCCCTGCGTCGTATCGGTGT
GGAGCCGTCCCCTGAGGTGTACACCGCCTTCGGAGACTTTGCCACAGAAG
CGTCGCGCTTCATCACTTTATCAAGACAAGCAATGGAGGCTCAAGGAATT
CTAGAACCCGGAGCGACTGAGGCGTACAAGAATGCGACAGCTATCGCCGA
CAGATTGGCATCTACGTTTGAAGGGGTGAATGTGACGGACGTGCTCGTCA
CGGCGACAGGGCTGATGATGGATGCGGAGCCCTATCTGACGAATTCGATT
GACAACCCCGTGGACGACGCTACCCGACAAAAGATGAAAGAGCCTTGGCA
AATAATCCTGAAACTAAGCCAATTTGAGAAAGCCGCGCAGCAGCAGCGCA
AAAGCTTTACCATGAGTCTGAAAGAAGACAATGTACTTGATGGAATCCTC
TTGCTGCATGAAGCCAGCGGCACCAGTGTGGAAAGCCCACTAATGCAACA
GCTGGATTTTGGGAGAATCGCCGAGATTACAGAAGATCATATGCTCGACG
CGTCCGAATTGAGATTCCTTGTCCAGAGAGTGGGCGCCTTAAATGAAATT
TACGATGTAGACGATTTCGCAGAGTTGATGGCCGAGGTTGAAGATAACTA
CCGTATGGTGCACGGGCTGCCACCAGTCAGAGAGGAACGGCCGTCTCTTT
CGGAATAGAAGGCATTGCTGCATACAAGCGCAAAATTAATTGTATAAAAT
GCCCAAGTTCAGTAGTGACAAGTGTGGCAAAAGCTCTCTAGAGTCGGGGA
GTCACAGAAAAGCTCGTAAGGTGCACGAGTACATCACGGGATGTGTAGAG
TGTGACCGGCATCGTTTCCGCAAAACACGATGGCAAGAAGGGCGTCATGA
GAAATATTCCAAAACAAAATCCTTAAGGGTGCGCGAAAAACGAGCCCTAT
CTTACTTTTCTTTACCACCCTGCGCGGGAAAATATCCCCAATGCTTCTCC
CACGTCGACACT back to topprotein sequence of rna2139 >rna2139-protein ID=rna2139-protein|Name=rna2139|organism=Nannochloropsis gaditana|type=polypeptide|length=764bp
MVPGIPFGLQSLLDEKLRSEIFDAGTAFAFGHDESFMPGHRHCLVTRKAL
QKESDIFLCDHLWSFPGTTNPAQARGLLAKMERGSKLEMRLRDILDMEED
ENENLEHLVERMWPLIGRYSYQSREAGMSQIMYIMDEVGSRFCEVLPRRS
LGISAADDKNPTEGKSENERNSAAFRCALVFHPDTREAFTVFWPRRDVTE
GEIATCDNLPHGQAARLARLQVLSNASVDDTMEGGESEEKEAGGKISRKS
IQASHHLRQFLESAGYCNVRQVNSLLGLEETYGRLLPVWEISDPRLRDAF
VTQLAAAESRLESSATSATEGTELCPAGDFSILTFLIRFFLMGLPASRAD
LLRHIPDKTLLQQLDNIGLLLVEGPDGPFNDASSRDKTRVKSLVQIVPVP
VGDTVNENDCAFLLTDFAQIGGLGEGFEPVMYVGPDSLGLVAATLGSQEK
NGAMAPRRILDVCAGCGVQGIAAMLRTRMYGPPWEKGRQQQSGSKEAFPH
ELILLELNPRAARFAHFNAALNHLEAVTSVVVGDVNTVRIADLPCPVYDI
VLSNPPYIPNPLQSVPKLHQYGDGGTTGEEVTQGVVSLAAQALSGNRTGG
RLYTVGNLTNVDTLPDRVERWWCDGLQYGKRNEEQQGLQIKAYHGLKWSV
AEYAALVHNHALEDTDALAHDLSAKKYREALEATGVRNVANGFVFVRCPP
FEGDKARRMNSSGMESNAAATSSITSIAFTQNVIALQDQVWQVLAMGKDP
EATETRRRLTEHWL back to topmRNA from alignment at CM002458.1:965315..967980+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2139 ID=rna2139|Name=rna2139|organism=Nannochloropsis gaditana|type=mRNA|length=2666bp|location=Sequence derived from alignment at CM002458.1:965315..967980+ (Nannochloropsis gaditana)
CATGTGTGTGACGACATGCTTAGCAGACGTGCTCGTATGGGCCAACCGGT
TTTCTGACGTCAAGCCGAACAGCTGACTCGTCGTGCCCAAGAACTCGGCA
GGGATACAAACTAGCAACGGCTCCCACGGACTAAAATTACCCGTCACAAG
GCATGCACAAATAACAGATTAATAGGATGGTACCAGGCATTCCCTTTGGG
CTGCAGTCCCTACTGGATGAAAAGCTTCGCTCCGAGGTACTTGACGCAAG
ATACTCATACTACTAGGGAAAAAATATTGTCTCGTTAACATATGAAGCTT
CACGTCGCACCTCACCGCGAAAAACATTTTACAGCAAGACGCTCATTGAA
TCCACGCATAAGACTAGATTTTTGATGCCGGCACTGCCTTTGCGTTTGGC
CATGATGAATCTTTCATGCCGGGGCATAGACATTGCCTCGTCACACGAAA
AGCCCTTCAAAAGGAGAGCGATATATTTCTTTGTGATCATTTGTGGTCAT
TCCCAGGCACAACAAATCCTGCACAAGCTCGAGGCCTACTCGCAAAAATG
GAAAGAGGCAGCAAATTAGAAATGCGCTTACGAGACATTCTTgatatgga
ggaggatgaaaatgAGAATCTCGAGCATCTTGTAGAGCGCATGTGGCCAT
TGATAGGAAGGTACAGCTACCAGAgccgggaggcggggatgtCGCAAATC
ATGTATATTATGGATGAAGTAGGTTCACGCTTTTGTGAAGTCTTGCCTCG
ACGCTCTTTGGGAATTTCAGCGGCTGATGATAAAAATCCAACGGAGGGGA
AATCGGAAAACGAAAGGAACTCCGCTGCATTCCGGTGTGCGTTGGTCTTC
CACCCCGACACAAGAGAAGCATTCACGGTCTTTTGGCCACGACGGGACGT
TACTGAAGGTGAGATTGCAACTTGTGACAACCTCCCTCACGGCCAAGCAG
CCCGCTTAGCCCGTCTTCAGGTCTTAAGTAACGCTAGCGTCGACGACACt
atggaagggggagagagcgaagaaaaggaggccggAGGGAAAATCTCGAG
AAAGAGTATTCAAGCCTCTCACCATCTTCGCCAATTTCTTGAATCGGCCG
GGTATTGTAATGTCCGACAAGTGAACTCGCTTTTGGGATTGGAGGAAACG
TACGGGCGGCTACTTCCAGTGTGGGAGATCAGCGATCCCCGGTTACGTGA
CGCTTTTGTAACACAGCTTGCAGCAGCAGAGTCAAGGCTGGAATCCTCGG
CCACCTCAGCCACAGAAGGGACGGAGCTATGCCCCGCTGGAGACTTCTCA
ATTCTGACTTTCCTCATCCGATTCTTTTTGATGggtctccctgcctcgcg
tGCCGATCTGCTCCGTCATATTCCTGATAAAACCCTCCTGCAGCAATTGG
ATAACATCGGATTGCTTCTTGTAGAGGGCCCAGATGGCCCCTTCAATGAT
GCAAGCAGCAGGGATAAAACGCGTGTAAAGAGCCTCGTCCAGATCGTTCC
AGTCCCCGTTGGGGACACGGTTAATGAGAATGACTGTGCCTTTCTGTTGA
CGGACTTCGCACAAATAGGGGGCCTGGGTGAAGGTTTTGAACCAGTCATG
TATGTGGGTCCAGATTCACTTGGCTTGGTGGCTGCCACGCTGGGCAGTCA
GGAGAAAAACGGGGCCATGGCGCCCCGAAGGATACTGGATGTATGCGCCG
GGTGCGGGGTGCAAGGGATTGCCGCCATGCTGCGCACTCGGATGTATGGG
CCGCCATGGGAAAaggggcggcagcagcagtcaGGGAGTAAGGAGGCATT
TCCCCACGAATTAATTCTCCTCGAACTCAACCCTCGAGCTGCCCGCTTTG
CACATTTTAACGCGGCCCTGAACCATTTGGAAGCAGTGACCTCCGTGGTC
GTTGGGGACGTCAATACTGTACGCATCGCCGATTTGCCATGTCCTGTTTA
CGACATAGTATTATCGAATCCACCGTACATCCCTAATCCACTACAAAGCG
TCCCAAAGCTTCATCAATATGGAGATGGCGGGACaacgggagaggaggta
acTCAAGGAGTGGTGTCCTTGGCAGCTCAAGCTTTGTCGGGGAATCGAAC
AGGTGGGAGGCTTTACACAGTGGGAAACCTCACCAATGTCGATACACTTC
CAGACCGGGTAGAGAGATGGTGGTGCGATGGCCTCCAATACGGTAAAAGA
AATGAGGAGCAGCAGGGGTTGCAAATCAAAGCGTACCATGGCTTGAAGTG
GTCCGTGGCAGAATATGCTGCTTTGGTTCATAATCATGCCCTCGAAGACA
CGGATGCCTTGGCGCATGATTTATCAGCGAAGAAGTACAGGGAGGCTCTG
GAGGCAACGGGCGTGCGAAACGTGGCGAATGGCTTTGTCTTCGTCCGGTG
TCCACCATttgagggagacaaggcgcGCCGCATGAATTCTTCCGGGATGG
AGTCCAATGCTGCTGCAACTAGCAGCATCACCAGTATCGCATTCACCCAA
AATGTTATTGCTCTCCAGGACCAAGTCTGGCAAGTCTTGGCCATGGGGAA
AGATCCCGAGGCAACCGAGACGCGGCGAAGGCTCACAGAGCATTGGTTGT
GAAAGCATGGAAAAAGCACAGAAACAAAtacgaggaaaaaagaatcGTGG
CACGACCATAGAACCT back to topCoding sequence (CDS) from alignment at CM002458.1:965315..967980+ >rna2139 ID=rna2139|Name=rna2139|organism=Nannochloropsis gaditana|type=CDS|length=4590bp|location=Sequence derived from alignment at CM002458.1:965315..967980+ (Nannochloropsis gaditana)
ATGGTACCAGGCATTCCCTTTGGGCTGCAGTCCCTACTGGATGAAAAGCT
TCGCTCCGAGATTTTTGATGCCGGCACTGCCTTTGCGTTTGGCCATGATG
AATCTTTCATGCCGGGGCATAGACATTGCCTCGTCACACGAAAAGCCCTT
CAAAAGGAGAGCGATATATTTCTTTGTGATCATTTGTGGTCATTCCCAGG
CACAACAAATCCTGCACAAGCTCGAGGCCTACTCGCAAAAATGGAAAGAG
GCAGCAAATTAGAAATGCGCTTACGAGACATTCTTgatatggaggaggat
gaaaatgAGAATCTCGAGCATCTTGTAGAGCGCATGTGGCCATTGATAGG
AAGGTACAGCTACCAGAgccgggaggcggggatgtCGCAAATCATGTATA
TTATGGATGAAGTAGGTTCACGCTTTTGTGAAGTCTTGCCTCGACGCTCT
TTGGGAATTTCAGCGGCTGATGATAAAAATCCAACGGAGGGGAAATCGGA
AAACGAAAGGAACTCCGCTGCATTCCGGTGTGCGTTGGTCTTCCACCCCG
ACACAAGAGAAGCATTCACGGTCTTTTGGCCACGACGGGACGTTACTGAA
GGTGAGATTGCAACTTGTGACAACCTCCCTCACGGCCAAGCAGCCCGCTT
AGCCCGTCTTCAGGTCTTAAGTAACGCTAGCGTCGACGACACtatggaag
ggggagagagcgaagaaaaggaggccggAGGGAAAATCTCGAGAAAGAGT
ATTCAAGCCTCTCACCATCTTCGCCAATTTCTTGAATCGGCCGGGTATTG
TAATGTCCGACAAGTGAACTCGCTTTTGGGATTGGAGGAAACGTACGGGC
GGCTACTTCCAGTGTGGGAGATCAGCGATCCCCGGTTACGTGACGCTTTT
GTAACACAGCTTGCAGCAGCAGAGTCAAGGCTGGAATCCTCGGCCACCTC
AGCCACAGAAGGGACGGAGCTATGCCCCGCTGGAGACTTCTCAATTCTGA
CTTTCCTCATCCGATTCTTTTTGATGggtctccctgcctcgcgtGCCGAT
CTGCTCCGTCATATTCCTGATAAAACCCTCCTGCAGCAATTGGATAACAT
CGGATTGCTTCTTGTAGAGGGCCCAGATGGCCCCTTCAATGATGCAAGCA
GCAGGGATAAAACGCGTGTAAAGAGCCTCGTCCAGATCGTTCCAGTCCCC
GTTGGGGACACGGTTAATGAGAATGACTGTGCCTTTCTGTTGACGGACTT
CGCACAAATAGGGGGCCTGGGTGAAGGTTTTGAACCAGTCATGTATGTGG
GTCCAGATTCACTTGGCTTGGTGGCTGCCACGCTGGGCAGTCAGGAGAAA
AACGGGGCCATGGCGCCCCGAAGGATACTGGATGTATGCGCCGGGTGCGG
GGTGCAAGGGATTGCCGCCATGCTGCGCACTCGGATGTATGGGCCGCCAT
GGGAAAaggggcggcagcagcagtcaGGGAGTAAGGAGGCATTTCCCCAC
GAATTAATTCTCCTCGAACTCAACCCTCGAGCTGCCCGCTTTGCACATTT
TAACGCGGCCCTGAACCATTTGGAAGCAGTGACCTCCGTGGTCGTTGGGG
ACGTCAATACTGTACGCATCGCCGATTTGCCATGTCCTGTTTACGACATA
GTATTATCGAATCCACCGTACATCCCTAATCCACTACAAAGCGTCCCAAA
GCTTCATCAATATGGAGATGGCGGGACaacgggagaggaggtaacTCAAG
GAGTGGTGTCCTTGGCAGCTCAAGCTTTGTCGGGGAATCGAACAGGTGGG
AGGCTTTACACAGTGGGAAACCTCACCAATGTCGATACACTTCCAGACCG
GGTAGAGAGATGGTGGTGCGATGGCCTCCAATACGGTAAAAGAAATGAGG
AGCAGCAGGGGTTGCAAATCAAAGCGTACCATGGCTTGAAGTGGTCCGTG
GCAGAATATGCTGCTTTGGTTCATAATCATGCCCTCGAAGACACGGATGC
CTTGGCGCATGATTTATCAGCGAAGAAGTACAGGGAGGCTCTGGAGGCAA
CGGGCGTGCGAAACGTGGCGAATGGCTTTGTCTTCGTCCGGTGTCCACCA
TttgagggagacaaggcgcGCCGCATGAATTCTTCCGGGATGGAGTCCAA
TGCTGCTGCAACTAGCAGCATCACCAGTATCGCATTCACCCAAAATGTTA
TTGCTCTCCAGGACCAAGTCTGGCAAGTCTTGGCCATGGGGAAAGATCCC
GAGGCAACCGAGACGCGGCGAAGGCTCACAGAGCATTGGTTGTGAATGGT
ACCAGGCATTCCCTTTGGGCTGCAGTCCCTACTGGATGAAAAGCTTCGCT
CCGAGATTTTTGATGCCGGCACTGCCTTTGCGTTTGGCCATGATGAATCT
TTCATGCCGGGGCATAGACATTGCCTCGTCACACGAAAAGCCCTTCAAAA
GGAGAGCGATATATTTCTTTGTGATCATTTGTGGTCATTCCCAGGCACAA
CAAATCCTGCACAAGCTCGAGGCCTACTCGCAAAAATGGAAAGAGGCAGC
AAATTAGAAATGCGCTTACGAGACATTCTTgatatggaggaggatgaaaa
tgAGAATCTCGAGCATCTTGTAGAGCGCATGTGGCCATTGATAGGAAGGT
ACAGCTACCAGAgccgggaggcggggatgtCGCAAATCATGTATATTATG
GATGAAGTAGGTTCACGCTTTTGTGAAGTCTTGCCTCGACGCTCTTTGGG
AATTTCAGCGGCTGATGATAAAAATCCAACGGAGGGGAAATCGGAAAACG
AAAGGAACTCCGCTGCATTCCGGTGTGCGTTGGTCTTCCACCCCGACACA
AGAGAAGCATTCACGGTCTTTTGGCCACGACGGGACGTTACTGAAGGTGA
GATTGCAACTTGTGACAACCTCCCTCACGGCCAAGCAGCCCGCTTAGCCC
GTCTTCAGGTCTTAAGTAACGCTAGCGTCGACGACACtatggaaggggga
gagagcgaagaaaaggaggccggAGGGAAAATCTCGAGAAAGAGTATTCA
AGCCTCTCACCATCTTCGCCAATTTCTTGAATCGGCCGGGTATTGTAATG
TCCGACAAGTGAACTCGCTTTTGGGATTGGAGGAAACGTACGGGCGGCTA
CTTCCAGTGTGGGAGATCAGCGATCCCCGGTTACGTGACGCTTTTGTAAC
ACAGCTTGCAGCAGCAGAGTCAAGGCTGGAATCCTCGGCCACCTCAGCCA
CAGAAGGGACGGAGCTATGCCCCGCTGGAGACTTCTCAATTCTGACTTTC
CTCATCCGATTCTTTTTGATGggtctccctgcctcgcgtGCCGATCTGCT
CCGTCATATTCCTGATAAAACCCTCCTGCAGCAATTGGATAACATCGGAT
TGCTTCTTGTAGAGGGCCCAGATGGCCCCTTCAATGATGCAAGCAGCAGG
GATAAAACGCGTGTAAAGAGCCTCGTCCAGATCGTTCCAGTCCCCGTTGG
GGACACGGTTAATGAGAATGACTGTGCCTTTCTGTTGACGGACTTCGCAC
AAATAGGGGGCCTGGGTGAAGGTTTTGAACCAGTCATGTATGTGGGTCCA
GATTCACTTGGCTTGGTGGCTGCCACGCTGGGCAGTCAGGAGAAAAACGG
GGCCATGGCGCCCCGAAGGATACTGGATGTATGCGCCGGGTGCGGGGTGC
AAGGGATTGCCGCCATGCTGCGCACTCGGATGTATGGGCCGCCATGGGAA
AaggggcggcagcagcagtcaGGGAGTAAGGAGGCATTTCCCCACGAATT
AATTCTCCTCGAACTCAACCCTCGAGCTGCCCGCTTTGCACATTTTAACG
CGGCCCTGAACCATTTGGAAGCAGTGACCTCCGTGGTCGTTGGGGACGTC
AATACTGTACGCATCGCCGATTTGCCATGTCCTGTTTACGACATAGTATT
ATCGAATCCACCGTACATCCCTAATCCACTACAAAGCGTCCCAAAGCTTC
ATCAATATGGAGATGGCGGGACaacgggagaggaggtaacTCAAGGAGTG
GTGTCCTTGGCAGCTCAAGCTTTGTCGGGGAATCGAACAGGTGGGAGGCT
TTACACAGTGGGAAACCTCACCAATGTCGATACACTTCCAGACCGGGTAG
AGAGATGGTGGTGCGATGGCCTCCAATACGGTAAAAGAAATGAGGAGCAG
CAGGGGTTGCAAATCAAAGCGTACCATGGCTTGAAGTGGTCCGTGGCAGA
ATATGCTGCTTTGGTTCATAATCATGCCCTCGAAGACACGGATGCCTTGG
CGCATGATTTATCAGCGAAGAAGTACAGGGAGGCTCTGGAGGCAACGGGC
GTGCGAAACGTGGCGAATGGCTTTGTCTTCGTCCGGTGTCCACCATttga
gggagacaaggcgcGCCGCATGAATTCTTCCGGGATGGAGTCCAATGCTG
CTGCAACTAGCAGCATCACCAGTATCGCATTCACCCAAAATGTTATTGCT
CTCCAGGACCAAGTCTGGCAAGTCTTGGCCATGGGGAAAGATCCCGAGGC
AACCGAGACGCGGCGAAGGCTCACAGAGCATTGGTTGTGA back to top
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