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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100009g58.650.mrna |
| Orig protein id | gnl|cribi|Naga_100009g58.650 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002458.1 | supercontig | CM002458.1:889379..890949 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2102 ID=rna2102|Name=rna2102|organism=Nannochloropsis gaditana|type=mRNA|length=3612bp
ATGGACTGGCGGCGGCTTTTGTCCGCAACTGAGGCCTCTGTGACGGGCTG
GACACGTAATCTCTGGTCTCGCACACGGACGCCGGTTCCTGCCCCCTCGG
ACTCCGAGCAGGAAAAATCAGGTGGGCAAGATTCGGACGTAGGCCGCGAT
GTTGTAGAAAGCAAAGCTTACAGGCCGTTGGAGCCTGTGTATCAGAACCT
AGCCCGCGGCTTGACCCACCGGCAGACGGTAGGTCGCCGCATGCTGAGTG
GCATGGGAAACGACACGCGTATGCTGGCAAAGCTACCATCCCGGCACCCT
GTCCATCAAATGGTGGTGGACCTGAACAGAGCCCTGGATGCCTACGTGGA
GGCCAAGCACGCTCAAACGCCACATTCAGCATCACCGTACGCCCCATTCA
ACCCCGTATCGGCACCGTCCCTCCCGGGAAACGCGGAGTGGCAGGAAGTA
ACCCAGGCTGTCCTCCATCTCCGCGACCGGCTGATCCCTCTCGACGTCTC
CCTCATGGACCCACCGGGTCGAGTGCGCGCAGACAGCGGCCACGCGGACG
ACCGGGAGATGTTCGTGCGCGTGAATGGTCCAGAGGCAGTTTTGCGGCTG
CTCTCGCCGCCGGTCTTGGTGGCCTCGGAGGTGGAAAACTTGAATGTGAA
CCTCCTGCACGCGAGCCTGGGGGAGGTAGTGAACGAGTCCATGGCCTTGC
TCCGGGCGGCCGTGCACGTCGACCAGGACACCGGGGCCCGATTGGCCTCT
GACGAGGTGGTTGTCGTCTTCTTCCAGCTCCTGCGGCACCGGTGTTTCTT
CGACGGGGCTGCGGCCGTCCTCGAGGACCTGCTGGGAGACCGGGCGGAGA
CTTTCTTCATGGGCCGAGTGCGAGACCTGCGCGGTATCCTCCTTAGCCTC
TCCCTCCGACAGCTCGCGCACTTCTGCCGCGTGCTTGCCCTCCTTGTCTT
CGACCAGGAAGACCGGAGTCTGATGGAGGCGGGCCATGCCATGCAGTCCT
TGGAGATCCTCCAGATGCGCCGGGACCGGCTCTACCGCCCCAACCCCACC
CTGGATCGCAACCAAGCCCTCCTGGCCCGCTCCCCGCAAATCCTCGTCCG
TCTGGTCACCCTTGTGCGTGTCATGAACCACGCGCCCCCCCTGCACGTCC
TCAGCAGCCGGAAGCGCCTAAGGCGGGCCTGCCCCACGCTGGAGATGTTC
TACCTCCTCGGGCACCGGATCGAGCAGTCGCGGTGGGAGCATGTGCAGGA
GCTGGAGGGGGCGGTGCGAGCCGGGGAGGCCCTGGCCAGGTCGGCGAAGA
GAGCCACGCCCGCGTCCTCCGAGGCCCGCCCCTCCTCCGCCGCCAGCACG
GGCCGACTCCCCCTGTCGGACCTGGTCAACCTCCTGGGGCCCCTGCTCTT
CGCCCGCGCCGCCCCTGCCAGCGCCTCCCGCGAGCTCGACCTCGATCTGG
GTCAGCTCCTTCGCTTCATCCACCGCCGCAGTGTCTCCAGTGGCCCCTCT
TTGCCTGCTTACGAGAGCCCGACGGATCCCTTGGGGAGCAGCACCGACGG
GGGTGACGGAAGTCTGCCCCCGTCCCCCCTCTTGTCGCCCTGCACCCTGG
CCGAGGCCAAGAGCGAGATGCAGTTCTACGGCATGCAGCTGGCGCCCCAC
CACGTGGAGGTCCTCTTCGTCCTCTGTGCGCTCTTGGGCGGGAGGAAGAA
GAAGTTCTTTCAGACGGTGCTTCTAGAGGAGATGGGGCTGCTGGAGGCCC
TGACAGTCATGTTCGACAGGATGAGCTGGGGGAAAGCCTCGCACCACTAC
CACACTCTTGGGGCCGTGCACATGGAGGACGAGGAGGAAGTCTACCTGGG
GGAAGGGCTGAGCGAGGATGAGGAAGGGGTGGAGGGGGAGGAGGAGGGAG
GGGCGGAGGACGAGGAGGAGGAGCTTCCTCCTCCCGAGGGACACTTGCAT
GGGCCCCAGTGCGAGTGCACGACGGACTCCGCCCTGCGAGTGCAGTTTCT
GCGGGCGGTCCACAATGCCTTGGACCGAGACTGGGAGGAGGAAGGAGAGA
GAGGGGAAGAGAGCTCGCGGCGACTGGCGCTCTCGGAGTGGGAATGGGCG
CAGGTGCAGGCCTTGAGGCAGGGGAGAGCTCTGGAAGGATCGGGCGGGGG
GAAGGTGGGTGGCCGGAGCGGCGGCGGCTGTAGCTTGATATCCAAGACGG
TCCAGACCCTGGTCTCCGAGAAGGAGGACAGCCCCTACCGCTTCTGGCTC
TGCAGCTGTCTGGAAGCCTTCCTCCGCGCCTCCCCGGCGGACGGAGCGCA
GCTTTTCCTGGCCTGTTGGGGGGAGGAAGGGCGGGCCCCGACCCTGCTCC
CCTTCCTAGTCGAGCAGATCCTCGCGGAAGGAGGCCAGTGTGGGGGGAGC
GCGCAGATGGCCTTTGACTTGCTCGGAGAGGTGGTGAAAGGCAGTCGACG
GGTGCTGGGCAGGTTAGAGGGGGATTTGGCGGGGATGGAGGACGGGTTCG
AGCGGCTGATGGAGGCCGTGCAGGCGCGGGTCGTGGACAGCAATGTCTTC
ATGCGGGCCGTGCTTCTGACGGTGGAGGACGGGGAGGGGGAGGGGGTGGA
CTGGGGCGCCGGGCAGGTGGGGCTGGAGGGGCCGGCGGAGGAGGGAGGGG
AGGGAGACGGGAAAGGGAGGAAGAGGCAGGTGGAGTGCGGGTTCGCGGCG
CAGGAGGCGGCGTCAAGCTGTGGCGAAGAACGCGAAAGCTCGGGAGGCTC
TTTGACTGCGATGCCCCGCCCCCCCCCGGCGTCCCCCTCCTATCCGGCAA
TCTCGCGCTTCGCCACCTACCTAAGTCAGCACCACGTGCGCCTGCTCAAG
CGCCTGATGGGCCAAGTGGACTTTGGGGCCGTCACGCACGAGAACATCTG
CGTCCTCAACTCGGCGCTGATCGTCTTTTTGTGCTGCTCCCGCCGCGGAC
GCCTTCCCCTTCTCGTGCAGCGCCTCCACCGAGTCCAAGCCAAGGACTTC
GAGCGGCTGGCCCGGGAGAATCCGAAGGAAAGCGCCAGGGTCCACGCCCG
GCGGTTCATCTGGTCCGCCCGCCCCTTCGACGACGAGTGCCGGCACGACC
CCGAGGTCTCGTGGGCTGATGGCAGACATGCCTTTCCCCCCACGACCACT
CCAGACCTGGAGACGCCGTGTAACTACCCTCCTTTCCACGTGGATTTCAT
GCGGAATTTTCGCGCCCTTCTCTTCTTCTGGCAGGCCTACTACCTCCCTC
GAGGCCGGGATCGGTACTCGCTGGAATTTTCCTCGCATATTCCTTTCGTT
GAGTGGAAAAATGTGGTGGACGCCCTGTGTGCAGACGATCCCACCTGTCC
CACAGCTTTGGTCCACGCCCCTTTCCATCTTCCCCCTTCCCCCTACTCCG
AAGCCCCTTCCTACCCGGTGCACAGTAGGGGTGGTAAGGCTAGGCGACCC
TGTCGGGAAAGCATCATAAATTGCAAGCGCAAGCATCGAAATGTAAACAA
ATTCTTGTTCGGCGTGGTCCACAGACCGAAGGGCGAAGGTACGCGTACGA
CGAGCGCTGTGCAGAGAAAACAAAAGAGCAAAGCTTATAAACGAATGCAA
CCGGGAATGTAA back to topprotein sequence of rna2102 >rna2102-protein ID=rna2102-protein|Name=rna2102|organism=Nannochloropsis gaditana|type=polypeptide|length=434bp
MIAGNPFLALQSTTATVREWVHACVTVNDAEGIQYFFSYFTFSLAAPFHI
FVTVCKRLHQHCVEWFWAVLRFVGGYGRSDGNETEGVQGLWSFCARRTCI
LGWHLHSHISGAVVNTWLQRSDYFKKGAQDYLYIHGDPEAPSWKITFMAV
YHGLQSAWMCRRPYVADVKRHERLQLLGFSLSLFIIAILIISFRLSRLRE
RKSRKLYLGVLSGLAVLSYALSSHLGQSHLLHALDLNVRLAASATPLRQF
LFVILVFLIYLLKSLALIGGSMTIWHTYIFLCTTSKMVYSNKWDSEVSSQ
VNTNFLYQNANCEDEVEDISSFSSCSSSITADLIASRNQSSQSPLQYDKN
ISENTDSDSSPRKMCPQYSSKATTRRGVNDLLDEFTALVVKVQTTGIRAA
SWEAGELLYDAVLTILIKHDLEHEQNLLKTELGD back to topmRNA from alignment at CM002458.1:889379..890949- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2102 ID=rna2102|Name=rna2102|organism=Nannochloropsis gaditana|type=mRNA|length=1571bp|location=Sequence derived from alignment at CM002458.1:889379..890949- (Nannochloropsis gaditana)
ATGATCGCTGGCAATCCATTTCTTGCTCTACAGGTAGATCAGGAGGTACT
ATATTTTAAGAGACTGAGAAATGTAAGGGGTGTCTACTCACCCCCATGCG
CTCTTTGTGTGACATTTCGGCATCGGAAGGATGAGATCGGGAATAAACAC
CCAAATTGACCTCTCGTATACGGCTGATCTCACGAATAAGAGATTCATCG
CTCAAACAAAATACATTTTGTACATTTAGAGTACCACTGCCACTGTGAGG
GAGTGGGTCCATGCTTGCGTTACGGTAAATGACGCAGAAGGTATACAATA
TTTCTTCAGCTATTTCACATTTAGTCTTGCAGCTCCCTTCCATATATTTG
TGACCGTATGTAAAAGGCTTCATCAGCATTGCGTTGAGTGGTTCTGGGCA
GTACTGAGATTTGTGGGGGGATACGGGCGTAGTGATGGAAATGAAACCGA
AGGCGTTCAAGGATTGTGGAGCTTTTGCGCGCGTAGAACCTGCATTCTCG
GATGGCATCTTCACTCACACATTTCTGGGGCGGTCGTCAATACTTGGCTG
CAGAGAAGTGACTATTTCAAAAAAGGCGCCCAAGATTACCTCTATATACA
CGGCGACCCTGAAGCACCATCCTGGAAAATTACATTCATGGCTGTGTATC
ATGGGTTGCAATCAGCATGGATGTGCAGACGACCTTATGTGGCCGACGTC
AAGCGGCACGAGAGACTCCAGCTACTCGGATTCTCCTTGAGCCTTTTCAT
CATAGCCATTCTTATCATTTCATTTCGATTGAGCAGGCTTCGTGAACGCA
AATCACGAAAGCTTTACCTCGGGGTCCTCTCAGGCCTTGCAGTATTGAGC
TATGCCTTGTCATCACACCTGGGTCAAAGCCATCTACTACATGCTCTAGA
CCTGAACGTCAGGCTGGCAGCGTCTGCGACACCCCTTCGACAGTTCCTTT
TTGTCATTCTCGTTTTTCTTATATACCTTTTGAAGAGCCTGGCGCTCATC
GGCGGTTCAATGACAATTTGGCATACTTATATTTTTTTGTGCACAACTTC
CAAAATGGTATATTCTAACAAATGGGACAGCGAAGTATCTTCCCAGGTGA
ACACAAATTTTTTATACCAAAATGCAAATTGTGAGGATGAAGTTGAAGAT
ATTTCTTCATTTTCGTCTTGCTCTTCGTCCATCACAGCAGATTTGATTGC
CAGTCGCAATCAAAGTAGTCAAAGTCCTCTGCAATATGATAAAAACATTT
CCGAAAATACTGATTCGGATTCCAGCCCTAGAAAGATGTGTCCCCAGTAC
AGCAGCAAAGCAACGACAAGAAGGGGTGTGAATGATCTCCTTGATGAATT
CACCGCACTGGTGGTAAAGGTGCAGACCACAGGTATTCGGGCCGCCTCAT
GGGAGGCAGGCGAGCTTTTATACGACGCAGTTTTGACAATTTTGATCAAG
CATGGTGCATAGATTGCGCTCCATCTCCTTGAAAATAGTGAGGGGTCTCA
TTTTGCCTACTTTACCCTTCAAAGATCTCGAGCATGAACAAAATCTACTA
AAAACGGAGCTGGGAGATTGA back to topCoding sequence (CDS) from alignment at CM002458.1:889379..890949- >rna2102 ID=rna2102|Name=rna2102|organism=Nannochloropsis gaditana|type=CDS|length=3915bp|location=Sequence derived from alignment at CM002458.1:889379..890949- (Nannochloropsis gaditana)
ATCTCGAGCATGAACAAAATCTACTAAAAACGGAGCTGGGAGATTGAAGT
ACCACTGCCACTGTGAGGGAGTGGGTCCATGCTTGCGTTACGGTAAATGA
CGCAGAAGGTATACAATATTTCTTCAGCTATTTCACATTTAGTCTTGCAG
CTCCCTTCCATATATTTGTGACCGTATGTAAAAGGCTTCATCAGCATTGC
GTTGAGTGGTTCTGGGCAGTACTGAGATTTGTGGGGGGATACGGGCGTAG
TGATGGAAATGAAACCGAAGGCGTTCAAGGATTGTGGAGCTTTTGCGCGC
GTAGAACCTGCATTCTCGGATGGCATCTTCACTCACACATTTCTGGGGCG
GTCGTCAATACTTGGCTGCAGAGAAGTGACTATTTCAAAAAAGGCGCCCA
AGATTACCTCTATATACACGGCGACCCTGAAGCACCATCCTGGAAAATTA
CATTCATGGCTGTGTATCATGGGTTGCAATCAGCATGGATGTGCAGACGA
CCTTATGTGGCCGACGTCAAGCGGCACGAGAGACTCCAGCTACTCGGATT
CTCCTTGAGCCTTTTCATCATAGCCATTCTTATCATTTCATTTCGATTGA
GCAGGCTTCGTGAACGCAAATCACGAAAGCTTTACCTCGGGGTCCTCTCA
GGCCTTGCAGTATTGAGCTATGCCTTGTCATCACACCTGGGTCAAAGCCA
TCTACTACATGCTCTAGACCTGAACGTCAGGCTGGCAGCGTCTGCGACAC
CCCTTCGACAGTTCCTTTTTGTCATTCTCGTTTTTCTTATATACCTTTTG
AAGAGCCTGGCGCTCATCGGCGGTTCAATGACAATTTGGCATACTTATAT
TTTTTTGTGCACAACTTCCAAAATGGTATATTCTAACAAATGGGACAGCG
AAGTATCTTCCCAGGTGAACACAAATTTTTTATACCAAAATGCAAATTGT
GAGGATGAAGTTGAAGATATTTCTTCATTTTCGTCTTGCTCTTCGTCCAT
CACAGCAGATTTGATTGCCAGTCGCAATCAAAGTAGTCAAAGTCCTCTGC
AATATGATAAAAACATTTCCGAAAATACTGATTCGGATTCCAGCCCTAGA
AAGATGTGTCCCCAGTACAGCAGCAAAGCAACGACAAGAAGGGGTGTGAA
TGATCTCCTTGATGAATTCACCGCACTGGTGGTAAAGGTGCAGACCACAG
GTATTCGGGCCGCCTCATGGGAGGCAGGCGAGCTTTTATACGACGCAGTT
TTGACAATTTTGATCAAGCATGATGATCGCTGGCAATCCATTTCTTGCTC
TACAGATCTCGAGCATGAACAAAATCTACTAAAAACGGAGCTGGGAGATT
GAAGTACCACTGCCACTGTGAGGGAGTGGGTCCATGCTTGCGTTACGGTA
AATGACGCAGAAGGTATACAATATTTCTTCAGCTATTTCACATTTAGTCT
TGCAGCTCCCTTCCATATATTTGTGACCGTATGTAAAAGGCTTCATCAGC
ATTGCGTTGAGTGGTTCTGGGCAGTACTGAGATTTGTGGGGGGATACGGG
CGTAGTGATGGAAATGAAACCGAAGGCGTTCAAGGATTGTGGAGCTTTTG
CGCGCGTAGAACCTGCATTCTCGGATGGCATCTTCACTCACACATTTCTG
GGGCGGTCGTCAATACTTGGCTGCAGAGAAGTGACTATTTCAAAAAAGGC
GCCCAAGATTACCTCTATATACACGGCGACCCTGAAGCACCATCCTGGAA
AATTACATTCATGGCTGTGTATCATGGGTTGCAATCAGCATGGATGTGCA
GACGACCTTATGTGGCCGACGTCAAGCGGCACGAGAGACTCCAGCTACTC
GGATTCTCCTTGAGCCTTTTCATCATAGCCATTCTTATCATTTCATTTCG
ATTGAGCAGGCTTCGTGAACGCAAATCACGAAAGCTTTACCTCGGGGTCC
TCTCAGGCCTTGCAGTATTGAGCTATGCCTTGTCATCACACCTGGGTCAA
AGCCATCTACTACATGCTCTAGACCTGAACGTCAGGCTGGCAGCGTCTGC
GACACCCCTTCGACAGTTCCTTTTTGTCATTCTCGTTTTTCTTATATACC
TTTTGAAGAGCCTGGCGCTCATCGGCGGTTCAATGACAATTTGGCATACT
TATATTTTTTTGTGCACAACTTCCAAAATGGTATATTCTAACAAATGGGA
CAGCGAAGTATCTTCCCAGGTGAACACAAATTTTTTATACCAAAATGCAA
ATTGTGAGGATGAAGTTGAAGATATTTCTTCATTTTCGTCTTGCTCTTCG
TCCATCACAGCAGATTTGATTGCCAGTCGCAATCAAAGTAGTCAAAGTCC
TCTGCAATATGATAAAAACATTTCCGAAAATACTGATTCGGATTCCAGCC
CTAGAAAGATGTGTCCCCAGTACAGCAGCAAAGCAACGACAAGAAGGGGT
GTGAATGATCTCCTTGATGAATTCACCGCACTGGTGGTAAAGGTGCAGAC
CACAGGTATTCGGGCCGCCTCATGGGAGGCAGGCGAGCTTTTATACGACG
CAGTTTTGACAATTTTGATCAAGCATGATGATCGCTGGCAATCCATTTCT
TGCTCTACAGATCTCGAGCATGAACAAAATCTACTAAAAACGGAGCTGGG
AGATTGAAGTACCACTGCCACTGTGAGGGAGTGGGTCCATGCTTGCGTTA
CGGTAAATGACGCAGAAGGTATACAATATTTCTTCAGCTATTTCACATTT
AGTCTTGCAGCTCCCTTCCATATATTTGTGACCGTATGTAAAAGGCTTCA
TCAGCATTGCGTTGAGTGGTTCTGGGCAGTACTGAGATTTGTGGGGGGAT
ACGGGCGTAGTGATGGAAATGAAACCGAAGGCGTTCAAGGATTGTGGAGC
TTTTGCGCGCGTAGAACCTGCATTCTCGGATGGCATCTTCACTCACACAT
TTCTGGGGCGGTCGTCAATACTTGGCTGCAGAGAAGTGACTATTTCAAAA
AAGGCGCCCAAGATTACCTCTATATACACGGCGACCCTGAAGCACCATCC
TGGAAAATTACATTCATGGCTGTGTATCATGGGTTGCAATCAGCATGGAT
GTGCAGACGACCTTATGTGGCCGACGTCAAGCGGCACGAGAGACTCCAGC
TACTCGGATTCTCCTTGAGCCTTTTCATCATAGCCATTCTTATCATTTCA
TTTCGATTGAGCAGGCTTCGTGAACGCAAATCACGAAAGCTTTACCTCGG
GGTCCTCTCAGGCCTTGCAGTATTGAGCTATGCCTTGTCATCACACCTGG
GTCAAAGCCATCTACTACATGCTCTAGACCTGAACGTCAGGCTGGCAGCG
TCTGCGACACCCCTTCGACAGTTCCTTTTTGTCATTCTCGTTTTTCTTAT
ATACCTTTTGAAGAGCCTGGCGCTCATCGGCGGTTCAATGACAATTTGGC
ATACTTATATTTTTTTGTGCACAACTTCCAAAATGGTATATTCTAACAAA
TGGGACAGCGAAGTATCTTCCCAGGTGAACACAAATTTTTTATACCAAAA
TGCAAATTGTGAGGATGAAGTTGAAGATATTTCTTCATTTTCGTCTTGCT
CTTCGTCCATCACAGCAGATTTGATTGCCAGTCGCAATCAAAGTAGTCAA
AGTCCTCTGCAATATGATAAAAACATTTCCGAAAATACTGATTCGGATTC
CAGCCCTAGAAAGATGTGTCCCCAGTACAGCAGCAAAGCAACGACAAGAA
GGGGTGTGAATGATCTCCTTGATGAATTCACCGCACTGGTGGTAAAGGTG
CAGACCACAGGTATTCGGGCCGCCTCATGGGAGGCAGGCGAGCTTTTATA
CGACGCAGTTTTGACAATTTTGATCAAGCATGATGATCGCTGGCAATCCA
TTTCTTGCTCTACAG back to top
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