rna2092, rna2092 (mRNA) Nannochloropsis gaditana

Overview
Namerna2092
Unique Namerna2092
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1761
Alignment locationCM002458.1:872151..873726 -

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Properties
Property NameValue
Productenolase
Orig transcript idgnl|cribi|Naga_100009g67.645.mrna
Orig protein idgnl|cribi|Naga_100009g67.645
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:872151..873726 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100009g67gene2002Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna2092rna2092-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM28602.1cds2084Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna2092 ID=rna2092|Name=rna2092|organism=Nannochloropsis gaditana|type=mRNA|length=1761bp
ATGTATTCAACACTCCTTCTCGGCGCTGCTCTATTGATTGCCTCACCACC
TTCCCCCTCAGCGCCTTTCCCGTCTCCAGCAGTAAAGCACCTTCACGATT
TCCTCAGGTCATGGACGGCCACTCGCGTCAATCCAGGCCGACTACAATGG
CCCAACTCGCTCATGACACTCACGAAGTGGACTGGAATTGAGCTCACAGA
TCTCAACTTTATGACCGAGCTCTACAGTTGTAACGCAGACGGCAGCAGCA
GCGCATGCTCGACAGGTGGCATTTGGCTTGTGCATGGGTACGCACCATTT
GATGCCACTGCTCAGAGAACAAACGTCCTCATAGAGAAACACCTCACACC
GACACTCTCGCGCGCGCGACAAGATGAACGAAATGATATGACCCGTGTGT
ATGTGAGCAGATTAGACATGACTCGAAATCCACAAGCTGCCAAAAAAATA
TTTTCAATCGACGACGATGCGAGCGTGGGATCCACGCTCATGATACTGCG
ACCCGACTTGGATGACGGTGGTCAAGCCGCGGAATATCGAGGCCCTCGTA
CGCGTCAAGGGATCAAGCACATGCTACAGCTTCTGCAAGCCGGCGAGTCT
CCAATAGTGGCATCGAATGCAGATGTCATGCCTGTAAACATGTTGCAGAC
GCACAAAGAAATCCAGCTCTTCTTGCAAGAGCATCCGCTGGCCTTTGTTT
TGGGAAGGACGGAGGAGGGTGCAGTGACGGAAGAGGAGATCACGTTTCGC
GACACGTGTTTGGCAATGAGTTGGCAGAACTGCGCTGTCGTGCCATCCAA
AAGAGCCCTACTTCGCGCAGCCGTGGCGTCATTGTCCGAGTCATTAGAAG
ATAATCATCAAGGTCCCGTCATTGCAAAGCTCGATCGAGTGCGCGATGCG
CTTTTGTACCGAAACAATGCATCAACATCCTTAGAGGACTGGATGCTGCT
GCACGGCTTTCCTCTCGTCAGTCACCTGGACCTTGACAGTCCCCATTTGG
AGCGGTTCATACTGCCAAAGCCGCAGACACGACAAGAAACAGAAGGGCAT
AAGCACGGGCCGGAGCAAGGGGTGCGCCAGCTTGTGATTGCGACCATACA
ACCTCTGAATGACTCCGATTCAGAAGTTGCGGCTGTTCTGGACGCATTGG
ACAACGCGGCAAGGCATAATCCCGCGGTGCGTTTTGGCTATACAACTGCG
GCGGGACCAAAGGGCTGGTCAGCATTTTTGAATCGACACTTCGCCCTCGA
CGACCATGAGGTAGAGAAGCTGTCGTCGTCAAGGCTCTTTTTTTATGATT
GCCACCAGCGTGCACTTTATGAGGGAGGCACAGGCGCCGAAAATTTGAAG
CTGCTTCTTGAGCAGGTCGAAGAGAGAACGCAGAGTCCGCGTCATCTCAC
ACCGCGGGCTAGGAGCCATGCCGAGGGGCGTGGGGTCAAAGATGATGATG
AAGGCGGAGGAATCAAGACGACGAAAGAAGTAGAATGCGATGAAGGCATG
CCAAAAATAGAATCTGAGGCAAGCTGGCGCCTTGTCCTTCATGCACTGGT
GGCAGCATGCGCGGCCGTTCTGGCACTGACGTTATTGGTCGTAACTTCAT
TGAAGAAGACATTTGCTGGCTTGCTGAAATTGCCGAATCGCTCGATTAAT
GTACTGTTACTTGAGTGCATGGATGTGGCAAGCTGCTCGCTATGCGCTCC
GTATATCTTCCCTTTCGCCACATGGATGCTAAATGATGTTGCACCCCAAT
CCCACTTTTAG
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protein sequence of rna2092

>rna2092-protein ID=rna2092-protein|Name=rna2092|organism=Nannochloropsis gaditana|type=polypeptide|length=459bp
MLFTLSLKKPALAAGRLSAARAASTITAIKGRQIIDSRGNPTVEVDLFTK
DGKFTASVPSGASTGIYEAMELRDGGKAFMGKGVTKAVNNVNTALAKALA
GQDVTQQATLDKMMIELDGTENKSKLGANAILGVSLAAAKAGAAAKQVPL
YKHFGDLAGNTKFVLPVPSFNVINGGSHAGNKLAFQEFMILPTGASTFSE
AMAIGCEVYHHLAKVIKAKYGQDAVNVGDEGGFAPNIQSNTEGVELLMSA
IEKAGYLEKVKLGMDVASSEFLTKDGKYDLDFKNPQGDGKQVLTGPQLAD
MYMELSNKYPIVSIEDPFDQDDWANYTPFTAAIGSKVQVVGDDLLVTNPK
RIKEAAQKKACNALLLKVNQIGSVTESIEAVKDSKKNGWGVMTSHRSGET
EDSYIADLAVGLCTGQIKTGAPCRSERLAKYNQLLRIEEDLGSKAVYAGK
SFRVPAWMA
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mRNA from alignment at CM002458.1:872151..873726-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna2092 ID=rna2092|Name=rna2092|organism=Nannochloropsis gaditana|type=mRNA|length=1576bp|location=Sequence derived from alignment at CM002458.1:872151..873726- (Nannochloropsis gaditana)
ATGCTTTTCACCCTCTCTCTGAAAAAGCCAGCCCTTGCCGCCGGACGTCT CTCGGCTGCTCGTGCCGCTTCGACTATCACAGCGATCAAGGGCCGCCAAA TTATCGACTCTCGCGGGAACCCGACAGTGGAGGTAGACTTGTTCACGAAG GACGGAAAATTCACAGCTTCTGTACCTTCAGGTGCTTCGACTGGAATTTA CGAGGCCATGGAGCTCAGAGACGGGGGCAAGGCTTTCATGGGGAAGGGTG TTACGAAAGCGGTCAATAATGTTAACACCGCCCTCGCAAAGGCCCTGGCC GGACAAGACGTGACACAGCAGGCAACGCTTGACAAGATGATGATTGAGCT TGATGGCACGGAGAATAAGAGCAAATTGGGAGCTAATGCGATTCTCGGCG TGTCTTTGGCCGCCGCCAAGGCAGGTGCTGCTGCAAAACAAGTCCCCCTC TACAAGCATTTTGGAGACTTGGCGGGCAACACCAAATTTGTACTGCCTGT TCCTTCTTTCAACGTGATCAACGGGGGTAGCCACGCTGGAAATAAACTGG CCTTTCAAGAATTCATGATCCTACCCACGGGTGCCTCCACGTTCTCCGAG GCGATGGCGATCGGTTGCGAAGTGTACCACCACCTGGCGAAGGTCATCAA AGCTAAGTACGGTCAGGACGCCGTGAACGTCGGGGACGAGGGCGGCTTTG CACCGAATATCCAGAGCAATACGGAAGGGGTCGAGCTGCTTATGTCCGCC ATTGAGAAGGCCGGGTACTTGGAGAAGGTCAAGCTCGGCATGGACGTTGC CTCCTCCGAGTTCCTGACGAAGGATGGAAAGTACGACCTGGACTTCAAGA ACCCGCAGGGCGATGGGAAACAAGTCTTGACGGGCCCGCAACTTGCGGAT ATGTACATGGAGCTGTCGAACAAGTACCCCATCGTTTCGATCGAGGACCC CTTCGACCAGGTAAAAGGGAGAGGGGCGGGGACAATGCCCGCGACAGGGG GGCTACATCGCAGGCAAACCTTCCGAGAAGGGAACTGTGTCCTCGGAGCA ATCGACCCGTGGGGGCTCGAGTGCATTTGATTCCCGATATTCTCTTCTCC CCTGCTGTTTAGTCGTCGTTCTCACTCGCCCGAACCCGCTCGTTCCCTGC TCCTAGGACGACTGGGCGAACTACACCCCCTTCACGGCCGCCATAGGCAG CAAGGTTCAGGTCGTGGGGGACGACTTGCTCGTGACCAACCCGAAGCGCA TCAAGGAAGCGGCGCAGAAGAAGGCTTGCAACGCCCTCCTTCTCAAAGTG AACCAGATCGGGTCGGTCACTGAATCTATCGAGGCGGTGAAGGACTCTAA GAAGAACGGATGGGGCGTGATGACTTCCCACCGATCTGGGGAGACGGAGG ATAGCTACATTGCCGATCTGGCCGTGGGGCTGTGCACTGGGCAGATCAAA ACAGGGGCTCCCTGCCGGTCTGAACGCCTTGCCAAGTACAACCAACTGCT GCGTATAGAAGAGGACCTGGGAAGCAAGGCTGTGTACGCTGGGAAGTCCT TTCGAGTGCCTGCCTGGATGGCTTGA
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Coding sequence (CDS) from alignment at CM002458.1:872151..873726-

>rna2092 ID=rna2092|Name=rna2092|organism=Nannochloropsis gaditana|type=CDS|length=2760bp|location=Sequence derived from alignment at CM002458.1:872151..873726- (Nannochloropsis gaditana)
GACGACTGGGCGAACTACACCCCCTTCACGGCCGCCATAGGCAGCAAGGT
TCAGGTCGTGGGGGACGACTTGCTCGTGACCAACCCGAAGCGCATCAAGG
AAGCGGCGCAGAAGAAGGCTTGCAACGCCCTCCTTCTCAAAGTGAACCAG
ATCGGGTCGGTCACTGAATCTATCGAGGCGGTGAAGGACTCTAAGAAGAA
CGGATGGGGCGTGATGACTTCCCACCGATCTGGGGAGACGGAGGATAGCT
ACATTGCCGATCTGGCCGTGGGGCTGTGCACTGGGCAGATCAAAACAGGG
GCTCCCTGCCGGTCTGAACGCCTTGCCAAGTACAACCAACTGCTGCGTAT
AGAAGAGGACCTGGGAAGCAAGGCTGTGTACGCTGGGAAGTCCTTTCGAG
TGCCTGCCTGGATGGCTTGAATGCTTTTCACCCTCTCTCTGAAAAAGCCA
GCCCTTGCCGCCGGACGTCTCTCGGCTGCTCGTGCCGCTTCGACTATCAC
AGCGATCAAGGGCCGCCAAATTATCGACTCTCGCGGGAACCCGACAGTGG
AGGTAGACTTGTTCACGAAGGACGGAAAATTCACAGCTTCTGTACCTTCA
GGTGCTTCGACTGGAATTTACGAGGCCATGGAGCTCAGAGACGGGGGCAA
GGCTTTCATGGGGAAGGGTGTTACGAAAGCGGTCAATAATGTTAACACCG
CCCTCGCAAAGGCCCTGGCCGGACAAGACGTGACACAGCAGGCAACGCTT
GACAAGATGATGATTGAGCTTGATGGCACGGAGAATAAGAGCAAATTGGG
AGCTAATGCGATTCTCGGCGTGTCTTTGGCCGCCGCCAAGGCAGGTGCTG
CTGCAAAACAAGTCCCCCTCTACAAGCATTTTGGAGACTTGGCGGGCAAC
ACCAAATTTGTACTGCCTGTTCCTTCTTTCAACGTGATCAACGGGGGTAG
CCACGCTGGAAATAAACTGGCCTTTCAAGAATTCATGATCCTACCCACGG
GTGCCTCCACGTTCTCCGAGGCGATGGCGATCGGTTGCGAAGTGTACCAC
CACCTGGCGAAGGTCATCAAAGCTAAGTACGGTCAGGACGCCGTGAACGT
CGGGGACGAGGGCGGCTTTGCACCGAATATCCAGAGCAATACGGAAGGGG
TCGAGCTGCTTATGTCCGCCATTGAGAAGGCCGGGTACTTGGAGAAGGTC
AAGCTCGGCATGGACGTTGCCTCCTCCGAGTTCCTGACGAAGGATGGAAA
GTACGACCTGGACTTCAAGAACCCGCAGGGCGATGGGAAACAAGTCTTGA
CGGGCCCGCAACTTGCGGATATGTACATGGAGCTGTCGAACAAGTACCCC
ATCGTTTCGATCGAGGACCCCTTCGACCAGGACGACTGGGCGAACTACAC
CCCCTTCACGGCCGCCATAGGCAGCAAGGTTCAGGTCGTGGGGGACGACT
TGCTCGTGACCAACCCGAAGCGCATCAAGGAAGCGGCGCAGAAGAAGGCT
TGCAACGCCCTCCTTCTCAAAGTGAACCAGATCGGGTCGGTCACTGAATC
TATCGAGGCGGTGAAGGACTCTAAGAAGAACGGATGGGGCGTGATGACTT
CCCACCGATCTGGGGAGACGGAGGATAGCTACATTGCCGATCTGGCCGTG
GGGCTGTGCACTGGGCAGATCAAAACAGGGGCTCCCTGCCGGTCTGAACG
CCTTGCCAAGTACAACCAACTGCTGCGTATAGAAGAGGACCTGGGAAGCA
AGGCTGTGTACGCTGGGAAGTCCTTTCGAGTGCCTGCCTGGATGGCTTGA
ATGCTTTTCACCCTCTCTCTGAAAAAGCCAGCCCTTGCCGCCGGACGTCT
CTCGGCTGCTCGTGCCGCTTCGACTATCACAGCGATCAAGGGCCGCCAAA
TTATCGACTCTCGCGGGAACCCGACAGTGGAGGTAGACTTGTTCACGAAG
GACGGAAAATTCACAGCTTCTGTACCTTCAGGTGCTTCGACTGGAATTTA
CGAGGCCATGGAGCTCAGAGACGGGGGCAAGGCTTTCATGGGGAAGGGTG
TTACGAAAGCGGTCAATAATGTTAACACCGCCCTCGCAAAGGCCCTGGCC
GGACAAGACGTGACACAGCAGGCAACGCTTGACAAGATGATGATTGAGCT
TGATGGCACGGAGAATAAGAGCAAATTGGGAGCTAATGCGATTCTCGGCG
TGTCTTTGGCCGCCGCCAAGGCAGGTGCTGCTGCAAAACAAGTCCCCCTC
TACAAGCATTTTGGAGACTTGGCGGGCAACACCAAATTTGTACTGCCTGT
TCCTTCTTTCAACGTGATCAACGGGGGTAGCCACGCTGGAAATAAACTGG
CCTTTCAAGAATTCATGATCCTACCCACGGGTGCCTCCACGTTCTCCGAG
GCGATGGCGATCGGTTGCGAAGTGTACCACCACCTGGCGAAGGTCATCAA
AGCTAAGTACGGTCAGGACGCCGTGAACGTCGGGGACGAGGGCGGCTTTG
CACCGAATATCCAGAGCAATACGGAAGGGGTCGAGCTGCTTATGTCCGCC
ATTGAGAAGGCCGGGTACTTGGAGAAGGTCAAGCTCGGCATGGACGTTGC
CTCCTCCGAGTTCCTGACGAAGGATGGAAAGTACGACCTGGACTTCAAGA
ACCCGCAGGGCGATGGGAAACAAGTCTTGACGGGCCCGCAACTTGCGGAT
ATGTACATGGAGCTGTCGAACAAGTACCCCATCGTTTCGATCGAGGACCC
CTTCGACCAG
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Synonyms
Publications