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Properties
| Property Name | Value |
|---|
| Product | gpi-anchored wall transfer protein |
| Orig transcript id | gnl|cribi|Naga_100009g69.629.mrna |
| Orig protein id | gnl|cribi|Naga_100009g69.629 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002458.1 | supercontig | CM002458.1:866910..869354 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2090 ID=rna2090|Name=rna2090|organism=Nannochloropsis gaditana|type=mRNA|length=1351bp
ACAGGTATCAGATAGGAGGGGACTCGCCCGCGTGCCTGCCTATTCGCTGG
TTTCGCCTCGGTATATGTCCTCTGCACCCTAGGACGGCAAGCGCGCGGGC
ATGGGCGGCTCTGACACTCATGCCAGCTATGTAAATGTACCACATCTCCT
GACAGCAGAAGGAAATTGTTTAGCTACCCCACCGATCGATGGAATTTCGA
AACACGTTGGCCACGCTGGAGAGCATCGAAACGAGGCTCACATGTATAGA
AGCAACGCAGGATCAGCCAGAGGTCCTCGCTAGCGAAGCGGGTGCCTTAG
AAGAGCTCCACTCTGATCTGACAACATCGCTGTCCCGGACCTTCGCGAAG
CTGCAGAAACGCTGTCAAGAAGTGGACCCCATTACACAAAAAACTCTATA
CGGAGACGCTATGAAGGCCCGAGTTGCTGAAGCATTCAGTCGCTACAGCT
CCCTCTTACAACGAGTTGTGGAGTTGAAAAACGGCCCCATGGAGAAAGCC
TGCCACGATGCTGAGAATGTTCGCTTAGCCGCCGAGTCCCAGGCCCGCTT
GGCTCGGGAAGAAGCGGCTGCTGCGAGGGAAAGGCAGCAAGAGGAAGCAG
CACGAGCACAAGCAGCTGCCAAGGCCGCCGAGACCCGTCGATTGGAAATG
GAAGCAAATCAGCGAGCGTTGCTCCACCGCGAGGCAGCGCTGGCCCGTGA
AAAGAAGAAGAAGGAAAGAGATGAGCGGGAGCAAGCTGCTGATCATGCAT
GGGCCGAGGCGCGGGCAGAGGATGCCGCTTTGGTAGATTCAATTCTACCA
GGAGCCCGAGGTGCCGAGGAGGCCTTGATAAATCTCCGGCATGCATGCGG
TGGTGAGGCGACAAAGGCGTACAAGGAGGCTGTGGCGACTCTGGCCCTAT
ATGTAGGTAATATAATTGCTCATCCCGAAGAAGCTGCTTTCAAGCGCATA
TCTCTGGAAGGTGCGCATTTCAAGTCTAAGCTTGGCCCGTGGGGACCAGG
CAGCCTGCACTGCTTAGTGGCTGCTGGTTTTCAGGTTCAACGAGAAGAGG
AGGACGAGGGGGGGAAGGGTGGACAAGGGGAGGATTCAAGGACGGCGGAT
GGCGCCGGCCAAGAGGGGAGCAGTCTCCGCGAGGACGGGGGATCCGGTGT
AGAAGGGAAAGAAGGGGAGATAGTCTTGCCTGGGGCCCGCGTCTTGTTGA
TGATCGAGCCGGACATGATGAGACATCAAGAAGAGTGGACAGTATGGTAT
GAAACCTGCAAAGGAGTACGGGATTTACTACAGCAGGAAGAAGCCAGAGT
AAAGCGACTTTAGAAAAAGCAACTTGACACAGACAAAATAGCAGTCTCAT
C back to topprotein sequence of rna2090 >rna2090-protein ID=rna2090-protein|Name=rna2090|organism=Nannochloropsis gaditana|type=polypeptide|length=531bp
MPAIQPADYKAAKEAFVSNLNGSGLYEIIKVTIPLPVALWAYTELRAFRL
VYSAPTPGLLLAFCYEFAVLIFPQILAQCWPESTPWVLAGLLVIGVSCRA
VVQATREPSLKSQWRHDRAVRLVSSQARNFLINYRAGVMLTSAIAILAVD
FTIFPRRFGKTETFGTSLMDLGVGCFIFSSGFCSRAARLFHHHSEAAPGA
AAAAGVSGVVCTGGEGSGSEAKEAQGGWSLGRGDRGGCGTPTSSKGGELF
RFSKRAAMWRTTKRCIPLVLLGLGRLLARRSVDYQEHVSEYGVHWNFFLT
LAVIQLATSALHTVFPHKALSPLALIVLVLYQMQLSVNGLTEYMFTAPRE
GSLIAQNREGILGVIGFLCLYLIGEQIGTWTVWAMGVVGGGTKITEAEAK
RALLQLVVLDAGLWGATALSCTLVQPISRRLVNMSYVLMSSAYNVMVIAL
LLAVDRFASMAATSRLLFAVNRNQLAFFILANLLTGGVNLSMHTIYASPF
VSWVVISSYTLVLLAMFVMLDRAFDVTLKFW back to topmRNA from alignment at CM002458.1:866910..869354+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2090 ID=rna2090|Name=rna2090|organism=Nannochloropsis gaditana|type=mRNA|length=2445bp|location=Sequence derived from alignment at CM002458.1:866910..869354+ (Nannochloropsis gaditana)
ATCGTCAGCTTGCTCAGGGACGTGGTTCAAGACACAATGTACCGACGACC
GCGTTAACCTTCCTTTCAACCTGGTCATGATACTCCCTGCAGGTGACTCG
GGAAGTTGAGTCAGTAGACAGCATCATCTCCCCGTCGCTACCTCTCCCGC
GCCTTTGTCGCACGGCATGCTGCAGCCCGCTAGAGGGGAATGAGAGAGGA
ATTTCAGGTCTATCACCATCTCACCCTCTTCGCAGCAGCTGCTGCAAGAG
ACAAAGAGCTGCCATTTCAGCCGCAGCAACTGGAGTAGTGTCACTTGGGT
GCGCCAGCAAATTTGCAAATAAGAGCCTTCTACGCTACACCGCCTTGTCA
CTACGCGGTCTTTGAGGTGCGGCTGGCAAGACAAGAAAGAGCATGCCTGC
CATCCAGCCTGCCGACTACAAGGCAGCCAAAGAAGCATTTGTCTCAAATT
TGAACGGCTCCGGCTTGTATGAGATCATTAAAGTCACCATCCCCCTGCCC
GTGGCTCTTTGGGCATACACGGAATTGCGAGCCTTCCGCCTGGTCTATTC
AGCTCCTACCCCTGGACTTTTGCTTGCATTTTGCTACGAATTCGCTGTTC
TGATATTTCCTCAAATTTTAGCCCAATGTTGGCCTGAATCGACACCGTGG
GTGCTCGCGGGGCTGTTGGTCATTGGTGTGAGTTGTCGTGCCGTCGTGCA
GGCGACTCGGGAGCCGTCCTTGAAGAGCCAATGGCGCCACGACCGAGCGG
TCCGTCTCGTTTCTTCCCAAGCCCGTAATTTCCTGATAAATTACCGGGCA
GGAGTGATGTTGACCTCCGCCATTGCGATCCTGGCGGTGGACTTCACCAT
CTTCCCGCGGCGTTTCGGGAAGACGGAGACCTTTGGCACGAGCCTGATGG
ACCTGGGCGTCGGCTGTTTCATTTTTTCCAGCGGATTTTGCTCACGGGCA
GCACGACTTTTTCACCATCACAGCGAAGCGGCCCcaggggcggcggctgc
tgcgggCGTGAGCGGGGTAGTGTGCACGGGGGGTGAGGGCAGCGGGTcag
aggccaaggaggctcaAGGCGGTTGGAGTCTAGGGAGAGGCGACCGGGGG
GGATGCGGCACACCCACAAGTAGCAAGGGCGGCGAGTTATTCCGTTTCTC
CAAGCGAGCGGCAATGTGGCGGACGACCAAGCGCTGCATTCCCCTTGTTC
TCCTCGGTCTGGGCAGGCTCCTGGCGCGCCGCTCCGTCGATTACCAAGAG
CATGTGAGCGAGTATGGCGTGCACTGGAacttcttcctcactctcGCCGT
CATCCAGCTGGCGACCTCGGCACTCCACACAGTCTTTCCCCACAAGGCGC
TCTCTCCCCTGGCCCTGATCGTCCTGGTCCTCTACCAGATGCAGTTGTCG
GTGAACGGCCTGACCGAATACATGTTCACagcgccgagggaggggagcct
CATCGCACAGAATCGGGAAGGTATCTTGGGTGTGATTGGCTTTCTGTGTC
TCTACCTGATAGGGGAGCAGATCGGGACCTGGACGGTATGGGCGATGGGC
GTagtgggcggagggacaaAGATtacggaggcggaagcgaaGCGTGCTCT
GCTACAGCTCGTCGTCTTGGACGCGGGGCTCTGGGGGGCGACGGCGCTGT
CTTGCACACTGGTCCAACCGATATCCCGCCGCCTGGTTAATATGTCCTAC
GTCTTGATGTCCTCCGCCTACAACGTGATGGTGATTGCGTTACTCTTGGC
TGTGGACAGGTTTGCCTCCATGGCGGCCACGTCCCGTCTCCTGTTCGCAG
TGAACAGAAATCAGCTCGCTTTCTTCATCCTGGCAAACCTGCTCACAGGG
GGGGTGAATTTGTCCATGCACACTATTTACGCCTCACCATTCGTATCCTG
GGTGGTAATTTCCTCTTACACGTTGGTTTTACTGGCAATGTTTGTCATGC
TGGATCGGGCCTTTGACGTGACACTCAAATTTTGGTAGCGGGTCGTGCTT
ATCAACAGCAATGTAGGGCAGTGTGAGTCGAGAATTCGATATTTTTCGAA
AGCTTGTTATTTTTTATGCAGGGGTCAAGCTTTGCCCGCCGATAAATAAC
GCGAAGTACTTCCATGTGCatagggagagggaggagcagatcAAGGCATT
ACTAAATTAATCACAGCGGGTTGCTGGTTCTTTCTGTAAATAGAAGTACA
TATAATTTCTTGAGGATCGAAATATGAAGATTTCAAGAGGATGAATTATA
GTAAAAATCCCCTCAAGAAACCGGTCCAGCGGGGGAACGAAAAAcgggag
gatgatggaatgGACAAAACATATTCGGTTTTGCGATTTCTTTAGGAAAA
TTTTTATACACCTTCCTTAATGCCAAGGTCTTTTGTATTGTTGTCAGCAT
TTCTAGCAAGTTTGACGTTGAAAAAAAGTTTTGCTTCATCTCTTC back to topCoding sequence (CDS) from alignment at CM002458.1:866910..869354+ >rna2090 ID=rna2090|Name=rna2090|organism=Nannochloropsis gaditana|type=CDS|length=1596bp|location=Sequence derived from alignment at CM002458.1:866910..869354+ (Nannochloropsis gaditana)
ATGCCTGCCATCCAGCCTGCCGACTACAAGGCAGCCAAAGAAGCATTTGT
CTCAAATTTGAACGGCTCCGGCTTGTATGAGATCATTAAAGTCACCATCC
CCCTGCCCGTGGCTCTTTGGGCATACACGGAATTGCGAGCCTTCCGCCTG
GTCTATTCAGCTCCTACCCCTGGACTTTTGCTTGCATTTTGCTACGAATT
CGCTGTTCTGATATTTCCTCAAATTTTAGCCCAATGTTGGCCTGAATCGA
CACCGTGGGTGCTCGCGGGGCTGTTGGTCATTGGTGTGAGTTGTCGTGCC
GTCGTGCAGGCGACTCGGGAGCCGTCCTTGAAGAGCCAATGGCGCCACGA
CCGAGCGGTCCGTCTCGTTTCTTCCCAAGCCCGTAATTTCCTGATAAATT
ACCGGGCAGGAGTGATGTTGACCTCCGCCATTGCGATCCTGGCGGTGGAC
TTCACCATCTTCCCGCGGCGTTTCGGGAAGACGGAGACCTTTGGCACGAG
CCTGATGGACCTGGGCGTCGGCTGTTTCATTTTTTCCAGCGGATTTTGCT
CACGGGCAGCACGACTTTTTCACCATCACAGCGAAGCGGCCCcaggggcg
gcggctgctgcgggCGTGAGCGGGGTAGTGTGCACGGGGGGTGAGGGCAG
CGGGTcagaggccaaggaggctcaAGGCGGTTGGAGTCTAGGGAGAGGCG
ACCGGGGGGGATGCGGCACACCCACAAGTAGCAAGGGCGGCGAGTTATTC
CGTTTCTCCAAGCGAGCGGCAATGTGGCGGACGACCAAGCGCTGCATTCC
CCTTGTTCTCCTCGGTCTGGGCAGGCTCCTGGCGCGCCGCTCCGTCGATT
ACCAAGAGCATGTGAGCGAGTATGGCGTGCACTGGAacttcttcctcact
ctcGCCGTCATCCAGCTGGCGACCTCGGCACTCCACACAGTCTTTCCCCA
CAAGGCGCTCTCTCCCCTGGCCCTGATCGTCCTGGTCCTCTACCAGATGC
AGTTGTCGGTGAACGGCCTGACCGAATACATGTTCACagcgccgagggag
gggagcctCATCGCACAGAATCGGGAAGGTATCTTGGGTGTGATTGGCTT
TCTGTGTCTCTACCTGATAGGGGAGCAGATCGGGACCTGGACGGTATGGG
CGATGGGCGTagtgggcggagggacaaAGATtacggaggcggaagcgaaG
CGTGCTCTGCTACAGCTCGTCGTCTTGGACGCGGGGCTCTGGGGGGCGAC
GGCGCTGTCTTGCACACTGGTCCAACCGATATCCCGCCGCCTGGTTAATA
TGTCCTACGTCTTGATGTCCTCCGCCTACAACGTGATGGTGATTGCGTTA
CTCTTGGCTGTGGACAGGTTTGCCTCCATGGCGGCCACGTCCCGTCTCCT
GTTCGCAGTGAACAGAAATCAGCTCGCTTTCTTCATCCTGGCAAACCTGC
TCACAGGGGGGGTGAATTTGTCCATGCACACTATTTACGCCTCACCATTC
GTATCCTGGGTGGTAATTTCCTCTTACACGTTGGTTTTACTGGCAATGTT
TGTCATGCTGGATCGGGCCTTTGACGTGACACTCAAATTTTGGTAG back to top
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