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Properties
| Property Name | Value |
|---|
| Product | impact-like protein |
| Orig transcript id | gnl|cribi|Naga_100009g74.662.mrna |
| Orig protein id | gnl|cribi|Naga_100009g74.662 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002458.1 | supercontig | CM002458.1:856813..858068 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2086 ID=rna2086|Name=rna2086|organism=Nannochloropsis gaditana|type=mRNA|length=1290bp
ATGGCTGATTACTGGAAATCGACGCCTAAGCACTGCTGCAAGTTCTGCAA
TGTGTGGATGGACGACAACAAGACCTCCCGGCGCCTGCACGAAGGAGGCG
CCCGGCACAAGCAGGCGGTGGAAGAGTTTTTCAAGGCGCAGAGAGAAGCG
AAGCGGCAAGGGTCCATTGGAGATGGCGAGCTGAGCAAGGAGCTGCGTGA
GATTGAAAAGGCAGCCCAGGCGCAAGCGGAGAAGGATGCAGCCATGTTCA
AAAGTAGTGTTGTCACAACAGTAGAGAGGGCCGCGCCCCCTCCTCCGCCT
CCGCGTCCGCCCACCTTCTCTCTCTCCTCTCGTCCTCCCCCTCCCCCTCT
CCCCCCCCCTCCCCCACGGCCACCCGGAGTCCGTCACCCACCCGTTCCGC
CATCGCATCGGGTCCGTGGCGATGTCGATGGCTGGCGAGACGTGAAAAAG
GAGGAAAGAGAGGTAAACGGCGGGAGCGAGGACGTGACGGGCGGGAGCGC
GGCGGCCGAGGTGGAAGGCCGGTACACTGTGGACGGCGTCACATTCTTGG
AGGGCAAGGCGGTCGAGACGCGGCTTGTGCGGGGCACGCCTTGCCAGGTG
TGGGTGGAGAAAGATGACGCGTGGCGGGAAGCGATCGTGTCGCGCGTCGA
GGTCACGGCAGTCCCGAACACGTCCTTGACGCTCCGGAAATTTTCGGTGA
TTCTCGGCGCACGCCGACCCGACGGGGGGAAGGAGGCAAGAGAAGGACAA
GCAGCGGTGACGCAGGGGGAAGAGGAGGCGAAAGAGGTGGAGGAGGGTGT
GCTTTCTGACCGGATCCGCTTGGTAGAGGGGGAGCACTCAATGGGAGGGG
TGGATACATTGCCCCCGCCCCCCCCGCCCCCTCCTGTGGACGAAGACACG
GGCCTTGGAGGCTGGCAGACGGTGTCGGTGCGGATGGTGGACGAAGAGGC
GGAACGGAAGGCCAGCGAAGCGGCGGTTCGCGCCGAGTCCAAGAGACGTA
AGGAAGAGGACGCGCAACGCCGGGCCCGCATGCTCGCCGAGGCGATGGAG
GGGGAGGATGCCATGAGTTCGTACGATCCGCACGGTCGGGGTATCTACAA
AGGGATGGACCTGAAAGTAGGGGGGACGGAGGGCTCGGGCGCGATCGTGG
GAGAGGTGGGGGGGGCGGCCTTGGAGGTAGACCTCGGGGGAGACCAGGCG
GGCCCCGTTGCCTTCAGGAAGAGGCGGGCGGGGGAGGGAAAGGGAGGGGG
GAAATTTCGGAGGAAACGGGCTCGCGAGGATGATGAGTAG back to topprotein sequence of rna2086 >rna2086-protein ID=rna2086-protein|Name=rna2086|organism=Nannochloropsis gaditana|type=polypeptide|length=321bp
MEASLLEQEAIKAQRDEEIESIKLIYTDDLVNVLNHPQDCVVEVKLGEAI
DGETSRTVTLTVYLPVSYPSPGAEMPFFEVRGVNWSNPKHDQIHIYEGMQ
EVFRQQAGEVVLFSWCEWLKEELHLLPITHSTAADEQVEEQETSGERDKC
DRALDGTRSDDGALTPQYAARQHGLDLVHGAPLTERRSTFQAHLARITSE
RDARTVLECLKLDRKIQRATHNMYAFRVFDVQKQAQVNDNDDDGENAAGG
KLAELLAVMGVNNVIVVVSRWWGGLLLGPSRFRVINNTARQLLEQCGVRG
RSGEKEGGGAGGKGLSASGKR back to topmRNA from alignment at CM002458.1:856813..858068- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna2086 ID=rna2086|Name=rna2086|organism=Nannochloropsis gaditana|type=mRNA|length=1256bp|location=Sequence derived from alignment at CM002458.1:856813..858068- (Nannochloropsis gaditana)
TGAATCACCCACCTGCTTGCGTACCTGTACACAGCCAAGCTTTCTACACC
TCCGATTAGATGATTTCCCTCAATTTTCAGTTATGAGGTTTGCGTCCTTG
TCGAGCACTCGAGCGGACAGGAGGAGAGACTTCTAGTGCAGGCCATGGAG
GCTTCACTTTTGGAACAAGAGGCAATCAAGGCCCAACGCGACGAGGAGAT
CGAGAGTATCAAGCTCATCTACACTGACGACTTGGTGAATGTCCTAAACC
ACCCTCAGGACTGCGTGGTCGAGGTCAAGCTGGGCGAGGCAATTGACGGG
GAGACGTCGCGGACCGTCACCCTTACGGTGTACTTACCCGTCTCCTACCC
ATCTCCGGGAGCAGAGATGCCTTTCTTTGAAGTGCGCGGCGTGAACTGGT
CGAATCCTAAGCATGACCAAATCCACATATATGAGGGCATGCAGGAGGTT
TTCCGGCAACAGGCTGGGGAGGTCGTGCTCTTCTCCTGGTGCGAGTGGCT
AAAGGAGGAGCTCCATTTGCTGCCCATCACACACAGCACGGCCGCCGATG
AGCAGGTTGAAGAGCAAGAGACATCAGGAGAACGGGACAAGTGCGATCGT
GCGCTGGATGGTACTCGCAGCGATGACGGTGCACTCACTCCACAGTATGC
GGCGCGACAGCACGGGCTCGACTTGGTCCACGGGGCCCCGCTCACCGAGC
GGAGAAGTACTTTTCAAGCACACCTGGCGCGGATTACCTCGGAGCGGGAT
GCTCGCACGGTTCTTGAGTGTCTGAAACTTGATCGAAAAATTCAACGGGC
AACACACAACATGTACGCCTTCCGCGTTTTCGACGTGCAGAAGCAAGCCC
AAGTGAACGACAACGATGACGACGGGGAGAATGCTGCAGGTGGGAAGCTG
GCAGAGCTCCTAGCAGTGATGGGCGTAAACAACGTCATAGTCGTGGTGAG
CCGCTGGTGGGGAGGTCTGCTCTTGGGGCCATCGCGGTTCCGCGTGATAA
ACAACACGGCCCGACAGCTGCTGGAGCAATGCGGCGTGAGGGGGAGATCG
GGCGAGAAAGAAGGGGGAGGGGCGGGAGGCAAAGGGCTGTCCGCATCTGG
AAAGAGATGAGGCTTGACGGCTCTCTGTGCCCTTGGCTAGGGGGCGGAGA
CGGAAAGGTTTTGGAGCAGTCGGGACTGTGCGACGGCAGCCTGTTGGGGA
AGGAAACCCTCCTTTGGTCGATAATAGAATCGGTACCGACATCCTTACAT
TTGCAC back to topCoding sequence (CDS) from alignment at CM002458.1:856813..858068- >rna2086 ID=rna2086|Name=rna2086|organism=Nannochloropsis gaditana|type=CDS|length=966bp|location=Sequence derived from alignment at CM002458.1:856813..858068- (Nannochloropsis gaditana)
ATGGAGGCTTCACTTTTGGAACAAGAGGCAATCAAGGCCCAACGCGACGA
GGAGATCGAGAGTATCAAGCTCATCTACACTGACGACTTGGTGAATGTCC
TAAACCACCCTCAGGACTGCGTGGTCGAGGTCAAGCTGGGCGAGGCAATT
GACGGGGAGACGTCGCGGACCGTCACCCTTACGGTGTACTTACCCGTCTC
CTACCCATCTCCGGGAGCAGAGATGCCTTTCTTTGAAGTGCGCGGCGTGA
ACTGGTCGAATCCTAAGCATGACCAAATCCACATATATGAGGGCATGCAG
GAGGTTTTCCGGCAACAGGCTGGGGAGGTCGTGCTCTTCTCCTGGTGCGA
GTGGCTAAAGGAGGAGCTCCATTTGCTGCCCATCACACACAGCACGGCCG
CCGATGAGCAGGTTGAAGAGCAAGAGACATCAGGAGAACGGGACAAGTGC
GATCGTGCGCTGGATGGTACTCGCAGCGATGACGGTGCACTCACTCCACA
GTATGCGGCGCGACAGCACGGGCTCGACTTGGTCCACGGGGCCCCGCTCA
CCGAGCGGAGAAGTACTTTTCAAGCACACCTGGCGCGGATTACCTCGGAG
CGGGATGCTCGCACGGTTCTTGAGTGTCTGAAACTTGATCGAAAAATTCA
ACGGGCAACACACAACATGTACGCCTTCCGCGTTTTCGACGTGCAGAAGC
AAGCCCAAGTGAACGACAACGATGACGACGGGGAGAATGCTGCAGGTGGG
AAGCTGGCAGAGCTCCTAGCAGTGATGGGCGTAAACAACGTCATAGTCGT
GGTGAGCCGCTGGTGGGGAGGTCTGCTCTTGGGGCCATCGCGGTTCCGCG
TGATAAACAACACGGCCCGACAGCTGCTGGAGCAATGCGGCGTGAGGGGG
AGATCGGGCGAGAAAGAAGGGGGAGGGGCGGGAGGCAAAGGGCTGTCCGC
ATCTGGAAAGAGATGA back to top
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