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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100182g14.945.mrna |
| Orig protein id | gnl|cribi|Naga_100182g14.945 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002458.1 | supercontig | CM002458.1:775167..777788 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2051 ID=rna2051|Name=rna2051|organism=Nannochloropsis gaditana|type=mRNA|length=1378bp
CCAGCCAGGCTTGCAGGGCGATAAATTCTAGCACACAATTTGTCCGGGCG
GGCTTGGCCACGACATAGACAAGTTAGCTTAACCTCCCCCCTCCGGTTCA
CCAATGAGCCCGTAGCTCCCAGCCGCCGATTCATATCATCGTCCTCAGGG
AAGACACAGGTCAACCCATCCCCCATCCCTTAAAAATAATAGGGAGCAAA
AAGAAGAACATGTCATCCTCTCTGCCCGCACTGGGAAGCAGCCGTAGACG
GGAGCGCATTTTATTGGGTCTGGACCAGGCCTTCGGGATCTCTACCGTGG
GAGAAGCAGAAAGAAGAAAGGATAAGGTTTCAAGCAGTAATCAAGAGGTG
ACCATGAGCACGAAAGAACCTTATTACAGCGACCTACCATCCCACCTCTG
GGAAGCTCTCAAGAGTGCTAGCGAGGAAAAATCGCTCCAGTCAGAAGATG
TGCTACCTTCTACGAGTTCTGTAGAAGATGTTTTACAAAGGCTTCTGCTA
CGAAATAGTAAGGACCTGCAGCTCCGAGGTAAAACGGTAAGCATGGACAA
CGCTCGCGGTCAAAACGAGCAGCTCCGAAGCCGGGCGTCACGGCAGCAGA
CTCGTCGATGTACGAGGCTTAGTGTGAGGACCAGTAATTTGGGGAATTCT
TTGATTTCAGGAAATGGGGTTGAGAGCTCTGACGTCAAGAGGAAACCAAG
AGACGTAGCTTCCCTCGACAGCTATGAAGGGTTGAAAAGCGCGTGGCAAG
GCTACGCACAAGACCTCCTGACGTTATGTCAGGAAAATGCTATGCGAACA
AAAGGTGGGATGTCTCCCATTTCTCCTGCGCAATCAAGACAGAATATACT
CCCGTGTAGCAGTAGTCTTAAACGTGGACCCAAGAAAAGTTTGGAGAGGT
CTCTAGCCATGGCAGATTTTTCTGGATGTCAAATTAAAATTCTTGATTCC
AAATGCGTCTCAGAGAAGCAGTCAATTATGTCATGCCTCTAAGCGTTTGC
GAATCATACCCAAAAAGGGGCGGCGATTTCAGGCGGATGTATTGACTTCA
TCAGGACGGTGCACAGTGATATGGCATGGTAACGGACTTATTGATCGAGA
GAGACTAACCGCCTTTCGCGCCAGTATGCCGAATAGATGTCGAGGTTTGG
AGAGGGAATCAGGAAGGATGTTGCGTAACACATGTGTTGATTCATGACTC
GCAATAATTACACATCGATTGCATTAGTTTCTCGAAGGAAGACTTTCAGT
AAATCGATTTCAAGAAAAAGTGAAGTTGGAAATCGAACAGGTGCCACTAC
ATTTGTGTCAAATATACTTTAATTTTGACAACGAGACAAACGGCAATGAG
GAAAGAGTAGACTGCAACTCTCCTCTCC back to topprotein sequence of rna2051 >rna2051-protein ID=rna2051-protein|Name=rna2051|organism=Nannochloropsis gaditana|type=polypeptide|length=788bp
MRACYRGVDEGVGMMESGTFSRYELASSASPNVTAVPPLSNGGQFLVPEG
MWKSQDAHIAPAMERAFPTTTSPASNFHSSGELGPGILLSARCGQGRPPQ
HPPTYFSTSLSHSHLEQRPDADMLKPGGPTSVGTRAGFSAEACLLTAAAK
CRDMASQASFHRSTLIKSSPSAFSTVKASKNVSARSKREEGKGDEGLRRR
SSSSSPQTRKGLSWEADAARRSSSAGHERERTTHGMLPLKKRRHASASPS
SWSSSESGQLPPSLGASEGRASAPCHRYTPFAPSPTPSLLDTSGWLVPDF
PSRPSSGLPTLPPLGDTVSPISPPPAVALPPPTPSHAGSPPASPSSAALA
DNVPSENDVNSLPSLFREDSPRSCCSFDVPHEAEKEDDLLAARPCAPACT
TSSQREEGQALGLSDNAGPSPSTLRASLAPSAPSVPTNTPQEERPKRARG
ASASVTSTRPGKKYAARNAPKTRNIPITRSVTETRNAPEACKTKALRRGP
HDEEPPLLARAGAGEPGPGRRRKRTAPAAEGSGRCLPARRGSFRGRAREV
RGAGDSKAVASSAPPVEAPTGSRYSIAPCPPRMSLHSGSHVPQKKRAPAC
SKPHMKSILFPRRISHRQGTQAKEVENLAMMNLEEAIADDGTKWKVGDFG
FTKYHMYPTWPLVVRALRIALDGETVASIEFFGESGHVECALHALVKYET
LFSKSYPLVISSLYTDSIVSSILAYRKQHMLSETAFYGVVGVSKEHEREA
FRFFLRRTLSVKASEMWSKLNARFPVEMVADQSHNTHK back to topmRNA from alignment at CM002458.1:775167..777788+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2051 ID=rna2051|Name=rna2051|organism=Nannochloropsis gaditana|type=mRNA|length=2622bp|location=Sequence derived from alignment at CM002458.1:775167..777788+ (Nannochloropsis gaditana)
CCGTCACTGCGCTGCCTTTTTTCCGTCCTCATCCATTTATCTATTCCTTG
ACAGGCAGTACTGACATACTCCGTTTGGAATTTCTGGACGATCGCATGAG
AGCGTGCTACCGTGGTGTTGATGAAGGCGTGGGGATGATGGAGTCAGGTA
CTTTCAGTCGGTACGAATTGGCAAGCAGCGCGTCACCGAATGTCACGGCC
GTCCCACCATTGTCCAATGGAGGGCAGTTCCTGGTGCCAGAAGGGATGTG
GAAGAGTCAGGATGCCCATATCGCGCCAGCGATGGAACGagccttcccca
ccaccacatcCCCTGCTAGCAATTTCCATAGCAGTGGGGAGTTGGGGCCT
GGTATACTGCTCTCGGCCCGGTGTGGTCAGGGCCGGCCACCTCAGCATCC
GCCCACCTATTTCTCGACGTCACTCTCGCACTCACACCTGGAGCAGCGGC
CAGACGCGGACATGCTCAAACCTGGGGGCCCAACGTCTGTGGGCACACGG
GCTGGGTTTTCGGCGGAAGCATGTCTCCTGACAGCCGCGGCCAAATGCCG
GGACATGGCCTCGCAAGCGAGCTTTCATCGCTCCACCCTGATCAAGAGCT
CCCCCTCAGCATTTTCTACCGTCAAAGCCTCCAAAAACGTGTCCGCCCGA
tcaaaaagggaggaaggaaagggcgatGAGGGGCTGAGgcgcaggagcag
cagcagcagccctcAGACCAGGAAGGGATTGAGCTGGGAGGCAGATGCCG
CCAGAAGAAGTTCTAGCGCGGGTCATGAAAGGGAGCGCACCACCCACGGC
ATGCTTCCCCTGAAAAAACGACGGCATGCCAGTGCCAGCCCCTCAAGCTG
GAGTAGCTCCGAGTCTGGacagctgcctccctctctcgggGCCTCCGAGG
GCCGTGCCAGCGCCCCCTGCCACCGTTACACgcccttcgcgccctcccct
acgccctccctcctcgacacgTCCGGCTGGTTGGTCCccgactttccctc
ccgcccgtccagCGGACTCCCCACCCTGCCGCCCCTAGGGGACACAGTCA
GCCCGATCTCGCCCCCTCCGGCTGTTgccttgcccccgcccaccccctcc
cacgccggctCGCCACCcgcctcaccctcctcagCGGCTCTCGCCGACAA
CGTCCCTTCGGAGAACGACGTTAACTCCTTACCGTCGCTCTTCCGAGAGG
ACAGTCCCCGCAGCTGTTGCAGTTTCGACGTACCGCACgaggctgagaag
gaggacgacctGTTAGCCGCCCGACCGTGTGCCCCGGCCTGCACGACGTC
AAgccaaagggaggaggggcaggcatTGGGGCTTTCGGATAATGCTGGGC
CTTCTCCGTCGACCTTACGCGCGTCACTGGCGCCGTCTGCCCCCTCCGTT
CCGACCAATACGCCCCAAGAAGAGCGGCCAAAGCGTGCCCGGGGCGCCTC
TGCCTCGGTGACTAGTACCAGGCCCGGCAAGAAGTACGCTGCGCGGAATG
CACCTAAAACGCGGAATATACCTATAACTCGGAGTGTGACGGAAACTCGG
AATGCGCCTGAAGCATGCAAGACGAAGGCGCTGAGGCGAGGGCCACACGA
CGAGGAACCACCTCTGCTAGCAAGAGCGGGTGCGGGGGAGCCAGGTCctg
gcagaaggaggaaacggacAGCCCCGGCCGCGGAGGGCTCTGGCAGGTGT
CTGCCAGCAAGGCGAGGGAGCTTTCGTGGTAGAGCGAGGGAGGTTAGGGG
CGCGGGGGACAGTAAGGCGGTCGCGAGttctgcccctcccgtcgAAGCCC
CCACAGGCTCCAGGTACTCGATAGCACCGTGTCCGCCAAGGATGTCATTG
CATTCGGGCAGCCATGTGCCCCAAAAAAAGAGAGCACCTGCCTGCTCGAA
ACCTCATATGAAATCCATTCTCTTTCCCCGGCGCATCTCGCATCGTCAAG
GCACTCaggccaaggaggtggaaaattTGGCTATGATGAACCTGGAAGAA
GCCATTGCAGACGACGGCACGAAGTGGAAGGTAGGAGATTTTGGCTTTAC
AAAATACCACATGTATCCCACATGGCCTTTGGTTGTGCGAGCTTTGAGAA
TCGCCCTAGACGGGGAGACCGTTGCGTCCATCGAGTTTTTCGGGGAGTCG
GGGCACGTGGAATGCGCCTTGCATGCATTGGTCAAGTACGAGACTTTGTT
CTCCAAATCTTATCCCCTTGTCATTTCAAGTCTGTATACAGACTCCATCG
TTAGCTCTATTTTGGCTTATCGAAAGCAACACATGCTTTCTGAAACTGCC
TTTTACGGGGTGGTGGGTGTGTCTAAAGAGCATGAGCGTGAGGCCTTTCG
ATTTTTTTTGAGACGTACTTTGTCCGTAAAGGCATCAGAAATGTGGTCGA
AATTAAATGCGCGTTTTCCCGTCGAAATGGTGGCAGATCAGTCACACAAC
ACCCACAAATAAAGTGGTTCAAAGTAGTGAGAAAATATGATAGTTGCACA
AGACCGTACGCGCCGGAGAGGTAATCATATGTAGAATAGAAAATGGGGGT
TGAAAGTTGCGGATTATGTCTGGCGAACGAGATACCTATGAAATCATTGA
ATGTATCAAAAATTGCCTGGCA back to topCoding sequence (CDS) from alignment at CM002458.1:775167..777788+ >rna2051 ID=rna2051|Name=rna2051|organism=Nannochloropsis gaditana|type=CDS|length=2367bp|location=Sequence derived from alignment at CM002458.1:775167..777788+ (Nannochloropsis gaditana)
ATGAGAGCGTGCTACCGTGGTGTTGATGAAGGCGTGGGGATGATGGAGTC
AGGTACTTTCAGTCGGTACGAATTGGCAAGCAGCGCGTCACCGAATGTCA
CGGCCGTCCCACCATTGTCCAATGGAGGGCAGTTCCTGGTGCCAGAAGGG
ATGTGGAAGAGTCAGGATGCCCATATCGCGCCAGCGATGGAACGagcctt
ccccaccaccacatcCCCTGCTAGCAATTTCCATAGCAGTGGGGAGTTGG
GGCCTGGTATACTGCTCTCGGCCCGGTGTGGTCAGGGCCGGCCACCTCAG
CATCCGCCCACCTATTTCTCGACGTCACTCTCGCACTCACACCTGGAGCA
GCGGCCAGACGCGGACATGCTCAAACCTGGGGGCCCAACGTCTGTGGGCA
CACGGGCTGGGTTTTCGGCGGAAGCATGTCTCCTGACAGCCGCGGCCAAA
TGCCGGGACATGGCCTCGCAAGCGAGCTTTCATCGCTCCACCCTGATCAA
GAGCTCCCCCTCAGCATTTTCTACCGTCAAAGCCTCCAAAAACGTGTCCG
CCCGAtcaaaaagggaggaaggaaagggcgatGAGGGGCTGAGgcgcagg
agcagcagcagcagccctcAGACCAGGAAGGGATTGAGCTGGGAGGCAGA
TGCCGCCAGAAGAAGTTCTAGCGCGGGTCATGAAAGGGAGCGCACCACCC
ACGGCATGCTTCCCCTGAAAAAACGACGGCATGCCAGTGCCAGCCCCTCA
AGCTGGAGTAGCTCCGAGTCTGGacagctgcctccctctctcgggGCCTC
CGAGGGCCGTGCCAGCGCCCCCTGCCACCGTTACACgcccttcgcgccct
cccctacgccctccctcctcgacacgTCCGGCTGGTTGGTCCccgacttt
ccctcccgcccgtccagCGGACTCCCCACCCTGCCGCCCCTAGGGGACAC
AGTCAGCCCGATCTCGCCCCCTCCGGCTGTTgccttgcccccgcccaccc
cctcccacgccggctCGCCACCcgcctcaccctcctcagCGGCTCTCGCC
GACAACGTCCCTTCGGAGAACGACGTTAACTCCTTACCGTCGCTCTTCCG
AGAGGACAGTCCCCGCAGCTGTTGCAGTTTCGACGTACCGCACgaggctg
agaaggaggacgacctGTTAGCCGCCCGACCGTGTGCCCCGGCCTGCACG
ACGTCAAgccaaagggaggaggggcaggcatTGGGGCTTTCGGATAATGC
TGGGCCTTCTCCGTCGACCTTACGCGCGTCACTGGCGCCGTCTGCCCCCT
CCGTTCCGACCAATACGCCCCAAGAAGAGCGGCCAAAGCGTGCCCGGGGC
GCCTCTGCCTCGGTGACTAGTACCAGGCCCGGCAAGAAGTACGCTGCGCG
GAATGCACCTAAAACGCGGAATATACCTATAACTCGGAGTGTGACGGAAA
CTCGGAATGCGCCTGAAGCATGCAAGACGAAGGCGCTGAGGCGAGGGCCA
CACGACGAGGAACCACCTCTGCTAGCAAGAGCGGGTGCGGGGGAGCCAGG
TCctggcagaaggaggaaacggacAGCCCCGGCCGCGGAGGGCTCTGGCA
GGTGTCTGCCAGCAAGGCGAGGGAGCTTTCGTGGTAGAGCGAGGGAGGTT
AGGGGCGCGGGGGACAGTAAGGCGGTCGCGAGttctgcccctcccgtcgA
AGCCCCCACAGGCTCCAGGTACTCGATAGCACCGTGTCCGCCAAGGATGT
CATTGCATTCGGGCAGCCATGTGCCCCAAAAAAAGAGAGCACCTGCCTGC
TCGAAACCTCATATGAAATCCATTCTCTTTCCCCGGCGCATCTCGCATCG
TCAAGGCACTCaggccaaggaggtggaaaattTGGCTATGATGAACCTGG
AAGAAGCCATTGCAGACGACGGCACGAAGTGGAAGGTAGGAGATTTTGGC
TTTACAAAATACCACATGTATCCCACATGGCCTTTGGTTGTGCGAGCTTT
GAGAATCGCCCTAGACGGGGAGACCGTTGCGTCCATCGAGTTTTTCGGGG
AGTCGGGGCACGTGGAATGCGCCTTGCATGCATTGGTCAAGTACGAGACT
TTGTTCTCCAAATCTTATCCCCTTGTCATTTCAAGTCTGTATACAGACTC
CATCGTTAGCTCTATTTTGGCTTATCGAAAGCAACACATGCTTTCTGAAA
CTGCCTTTTACGGGGTGGTGGGTGTGTCTAAAGAGCATGAGCGTGAGGCC
TTTCGATTTTTTTTGAGACGTACTTTGTCCGTAAAGGCATCAGAAATGTG
GTCGAAATTAAATGCGCGTTTTCCCGTCGAAATGGTGGCAGATCAGTCAC
ACAACACCCACAAATAA back to top
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