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Properties
| Property Name | Value |
|---|
| Product | methyltransferase type 11 |
| Orig transcript id | gnl|cribi|Naga_100182g3.941.mrna |
| Orig protein id | gnl|cribi|Naga_100182g3.941 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002458.1 | supercontig | CM002458.1:753610..757228 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2040 ID=rna2040|Name=rna2040|organism=Nannochloropsis gaditana|type=mRNA|length=1738bp
AGCCCTGATATGACTTTTCGGCCTTGCCATACTTGTAGGGATTGACGATT
GATCTTTTGGGTATCCTGTCGTGCAAACGGTGGCGATGGCTGGGGCAACT
GAGGATTGGACGCAGGCCAAGGCCAAGGGCAACCAGGCCTATCAGGCGGG
CAATCATCTATTAGCCGTGGAGCACTTTACCACCGCGATCCAACTTACCC
CTAAGGATGGAGATCATCAACTGCATATTTTGTACTCTAACCGATCCGCT
GCCCGGTTAAATCTGGGACTGGCATACGAGGCTCTGGCTGATGCCAAGAA
ATGTACAGAGATCCAGCCAGCCTTCGCGAAAGGCTGGAGCCGCGTAGGCG
CTGCCATGTACCGCATGGGCCGATATCCTGAAGCGGTGGCAGCGTATACT
GAAGGTCTGGTCCAGGCACCGGGAAACGCGGATCTCACTCGGGCGCTCGC
CGAAGCTAGCCATGCCGCCCAGGAGATGCGGGGCCCTCCTCGCAGAGACC
TCTTGCCCCATCTGCGAGCTTTCTTCCTCAAGGATCGGCTGGCCACTCGA
CTTTTCCTTCCCCGCGTCTTCATGCTACTCAACGGCCTTATCTATCTAAT
CCCTTTTCTGCCTGCAGGCTGGGGTCTGGCCAGCTACCGTCGCGTGCTGT
ACACGGCGGCAGTCCTCCATCTCTACGCTCTCTACAACGCGCATGGCTTC
CCGAAATTTACGATAGACTTCCTCGCGCGATGCATGCAAGACGTACACGC
GTCCCCCCTGTTCCTCTCCCTTCTCCTCCTCTCCTTCAGGAGTAAGACGT
ATCTGCCGGGCGTGGCCGCGCTCCTACTCACCGAGGGCATGCAGGTCCTC
TGCTTCCTCAACCAGCTCCTCGCTCTCGCGCGACCAGCAGCAGAGAAAGC
TCTCTCGGCACGATTCATGGGCCTAGCCATGCGCTACACCCAAAATCCGC
GGTACGGCGCGCTTCCTACTCCCCAGGCGCGGTGGGCAGCGCTCTTCACG
GCTTCTGCCTCCCACGCGGCCGCCTTGGAGATCGGAACGGGCCTCTTCCT
CGGACTCGAGCTCCTCACTCCACGACGGAACATCTTTGGCATCTTTCTCT
TCTGGCAGTACCTCCAGATGCGCTACATGCTGGACCAAAGCGGCGTCGTG
AAGGGCCACTTCAAACGGCTCGACGACTTCCTGCTCAGGCTGACGAGCCA
TCCCTCATGTCCAGCATTCCTTGGACGGGGGTACGAGCTTCTTCGCGGAT
ATCTTGGAAGGGCTGTGGCCATCCCAGATCCACAGCAACAGCGGCGGCCG
CCGCAAGGGGGGGGGATGCCGCGTTGCTGTGTCATGTGAGACGGCAGCCA
GGGTGTCGCGACGGGCGAGAGAGAGGATACGTAGCCCAGGAGGTTGTGTT
GGTCTGGCACGGCTGACAAGAACAACACCGCGGAAGGGTCTTGATGGTGT
TTGCGAAGAGCGCACCACCTAAGCAAGAGTGGCACGCTTTCCAAGATTGC
TACTCGCGGACTAAGGAATGATCAAGAAAGCTCGGGCTCGTCTGTTCACT
TTTTGATTTCTGTTCAAACTTTTGACTCTTGCTGACAAAATTGAAAACCA
ATATCTTCCGGGATTCCCTTCGCATATTTTAACTTGTGCATACAAATAAA
GGGGGGGAGGTACGATAGCGATCGCTTCACTCTGCCCTAGCACCATGGTG
ACGCTTTGTGCCCCTTCCATCGTTTCGTTTTAAGAAGA back to topprotein sequence of rna2040 >rna2040-protein ID=rna2040-protein|Name=rna2040|organism=Nannochloropsis gaditana|type=polypeptide|length=581bp
MPGVTRRRPVAAPGLAIAIIACSWHLNPCDAFQASSSSSRQRQLQHGRQI
QHHTTSLRKQGEGFDAFKLPASRRTHETSTSTSSSTAPSPAPPNAPSPSV
VPLSSPSFSSSKPLEGTLLETRSYFSVEFLAHRMSSSATLAATGVPRRMT
VESEQKQKAVKPLEDEVGEAWLRAQKEVEANPESMQQVEEEEELVSVGVI
SHHEALELLCLREGLGGRGGRGGVHYHDGVSLDLGRSETMVVVTEEGIAV
PVVEASHPRRPQREAREPALVATWGELEDIVDQARRGRPGCFTLYTDGTQ
PWKISAVSLQTGRAANLLPSLHVKGPPTVVLGSYRMHRLDGPRPGRYLGP
AEDTRRKLDAIKMKKVYGKVLDTTTGLGYTAIAAARCAHVTEVVTVEADQ
AALEMSRYNPWSADLFSSPSVRASQGLSPIHMVQGDVCELIHSFRDNAFA
AVMHDPPSMALSRAAVHLYSPAFYAQLYRVLRWRGRLFHFVGGHPKAKEN
ARLYKMVVQRLEAAGFKKVMILASAQGVVAEKGEDRKSKKALHARNGSGE
RGSGGKAQRLRAQREFMWGMDFLGEEGEGLE back to topmRNA from alignment at CM002458.1:753610..757228- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna2040 ID=rna2040|Name=rna2040|organism=Nannochloropsis gaditana|type=mRNA|length=3619bp|location=Sequence derived from alignment at CM002458.1:753610..757228- (Nannochloropsis gaditana)
GATCAATTCGATTTTTGCTGATGAAAGGTGGTTAGACTGAGACAGTCTTT
AATGCCTTAGGGTTTCGATAGAAAGGGTGTATCGGTTCCAAGCTCCTAGA
GTCTCGCTTCCAAGCTCCTGAAGTCTCGCTTCCCTCTAGTTATCGCCATC
TCCGCTTCCGCTTGCGGCAGAAGCAGTGAAATTATGTCACAAGCAGTTAA
CCAACAGTCAGATGTCTTCTTTTCGCAAAATTTTTCTTAAGATTTTGATA
GTTACATGACGGGTTGGCATGGATTTCGAAGGGCTGGTTCTCTGTGAGGA
TGCTACCAGCTGGTATGTGTACTGTTTCGTGCCTGATCATCGCTAGCACC
CGGATTTGAGTGTCTTCCGCTTCAAATACACGACCCAGTACTCTCGCACA
ACTATGCCGATGCTAAGTGACCCTGCCCCATGTGCGTAAGAGTAGGATGG
ACGTCTTCCAACCAATTCCTGTGGCATGAGCGGACTTCGCAATCCCCGTA
CTAGAATTGCCGCTCGTGACGCTCCTTCTCTCGTCGCCTCGCGAGACTCT
TGAGTCGAGAAGATCTGAATGTTTATTATTCGATGTGTGTCAACAATAGT
GCCGTCGCGTTTTCAGATCCACTCGTCTCACGCCATGCACGCAAAAGTAT
AGAGTGTGGGACCGAAGAGTTTTCTAAAATTGTGGGGAAATTAGTAGACC
AGCAAGTAGACAAGTTTGTCCCTGACCGTGTCGCTCGCTGTCAGCATTCA
GAAGCGTAACATATCTCAAATTTCGACAGGAGCAAGTCATGCCCGGGGTC
ACCCGAAGGAGACCAGTCGCTGCCCCAGGATTGGCCATAGCTATTATTGC
GTGCAGTTGGCATCTGAATCCTTGTGATGCGTTTCAAGCTTCATCGTCAT
CAAGCAGACAGCGGCAGCTGCAGCATGGAAGGCAGATTCAGCATCACACG
ACTTCCCTGAGAAAACAGGGGGAGGGCTTCGATGCTTTTAAATTACCAGC
GTCAAGAAGGACGCATGAGACGTCTACCTCGACCTCCTCCTCAACTGCCC
CGTCTCCTGCACCTCCAAACGCGCCCTCACCTTCTGTTGTCCCTCTTTCC
TCTCCCTCCTTTTCCTCCTCAAAGCCCCTGGAAGGAACTTTATTGGAGAC
CCGGTCATACTTCTCTGTAGAATTTCTTGCGCATCGCATGTCGTCCTCTG
CGACACTCGCTGCTACAGGGGTACCCAGGCGCATGACTGTGGAGAGCGAA
CAGAAGCAAAAGGCTGTCAAGCCGCTTGAAGACGAAGTAGGGGAGGCGTG
GCTGAGGGCACAGAAGGAGGTTGAAGCAAACCCAGAATCTATGCAGCAGG
TTGAGGAAGAGGAAGAGCTGGTGTCCGTAGGAGTGATCAGTCACCACGAG
GCATTGGAGCTCCTCTGTCTCCGGGAGGGTCTGGGGGGCCGTGGAGGGCG
GGGAGGAGTGCACTACCACGACGGCGTTTCCTTGGACCTGGGCCGAAGCG
AGACTATGGTGGTTGTCACGGAGGAAGGTATCGCCGTGCCTGTTGTGGAG
GCAAGCCATCCCCGGCGCCCCCAAAGGGAGGCGCGAGAGCCCGCCCTGGT
GGCGACCTGGGGCGAGCTGGAGGACATCGTGGACCAAGCCCGCAGGGGGC
GACCGGGGTGCTTCACGCTCTACACGGACGGGACGCAGCCCTGGAAGATC
AGCGCGGTCAGCCTGCAGACAGGGCGGGCGGCCAACCTCCTGCCCTCTCT
GCACGTGAAAGGTCCGCCCACCGTGGTCCTGGGCTCCTACCGGATGCACC
GCCTGGACGGCCCCCGCCCCGGGCGCTACTTGGGCCCCGCCGAGGATACC
CGGCGGAAACTCGACGCGATCAAGATGAAAAAGGTGTACGGGAAGGTGCT
GGACACGACCACGGGCCTGGGTTACACAGCCATCGCGGCAGCGCGGTGCG
CGCACGTGACGGAGGTGGTGACAGTGGAGGCGGACCAAGCCGCCCTTGAG
ATGTCGCGCTACAACCCCTGGAGCGCCGATCTGTTCTCCTCCCCGTCCGT
CCGTGCCTCCCAAGGCCTATCCCCTATCCATATGGTGCAGGGCGACGTGT
GCGAGCTCATCCATTCTTTCCGGGACAATGCCTTCGCCGCCGTCATGCAC
GACCCCCCGTCCATGGCCCTCTCGCGCGCCGCCGTGCATCTCTATTCGCC
CGCCTTCTATGCCCAGCTCTACCGGGTCCTACGCTGGCGCGGCCGTCTCT
TTCACTTCGTGGGCGGCCATCCAAAGGCCAAAGAGAACGCGCGCCTGTAC
AAGATGGTGGTGCAGAGGCTGGAAGCCGCCGGTTTTAAGAAGGTGATGAT
CCTTGCCTCGGCGCAAGGAGTGGTGGCCGAGAAAGGCGAAGACAGGAAGA
GCAAAAAAGCGCTGCATGCCCGCAATGGGAGCGGGGAGAGAGGATCGGGA
GGAAAAGCGCAGCGGTTGAGGGCACAGCGGGAGTTCATGTGGGGCATGGA
CTTCTTGGGCGAGGAGGGGGAGGGGCTCGAGTAGGAGCGATTTGGGTAAG
ACTAATGTGCATACTGTCATCTAGTGGTTGGTCGTGGGAAAGCATTCGTA
AATAGAAATTGTATTGGTGAAGAACAGCGACTAGGTATGCATCCGCCGCG
CGGTAGCGTGTACAGCAACTAAACCGTCGATTGAGCCGAGCTAGTGTCTA
CGGTAGAGGATCAAATGCAACTGTGTGCATGGTATTCGCTCATCCTGGCC
TTCTTGTGACCATACAAGTGTTGCCCAAGTCAGAGTGGTAGTACTAGGGC
GGCACGCCTCGGAAGTGCGGGGTCTCGCGCCGACGGGGATAGGATCTACC
TGGATGGTCGTCGCTCGGAAGTGGGAGTGGTCGAGGGCACATAAATTGAA
AAGAGCAAGTGGGGCATGGAATAAGAGGAAGGTCGATGGCAGGTTGTGTT
GTGATTGGGCCAGTCGTGGAGGCCGTGCTTGTCTGAGGGCGGCACGAGCG
AGCAGTGACAGACCGCCAGATAAGGGTAAAATACTTGCTACGAGGGAACC
TCGATCGAAGGGAACGAGAAGCGAGGTATGTACGGAAGGACAACTCGGTC
GGCGAGTCGCGCTTTGCCGAAAAGTACGCGTAATTTGGCAAACACCAGTC
GAAAATACAGTAGCTGTTGTAGGAAGGACACTAGCAACGACCTCGCGCAT
TATCCACTCTAGCTTGTAATGAACCTCGATAATTTTAAGCGCAAGCGAAG
TATGAGAGTTGGATGACGTAACGAGACTGCCCCTCGAAACCTTCTTCTTA
AAACGAAACGATGGAAGGGGCACAAAGCGTCACCATGGTGCTAGGGCAGA
GTGAAGCGATCGCTATCGTACCTCCCCCCCTTTATTTGTATGCACAAGTT
AAAATATGCGAAGGGAATCCCGGAAGATATTGGTTTTCAATTTTGTCAGC
AAGAGTCAAAAGTTTGAACAGAAATCAAAAAGTGAACAGACGAGCCCGAG
CTTTCTTGATCATTCCTTAGTCCGCGAGTAGCAATCTTGGAAAGCGTGCC
ACTCTTGCTTAGGTGGTGCGCTCTTCGCAAACACCATCAAGACCCTTCCG
CGGTGTTGTTCTTGTCAGC back to topCoding sequence (CDS) from alignment at CM002458.1:753610..757228- >rna2040 ID=rna2040|Name=rna2040|organism=Nannochloropsis gaditana|type=CDS|length=1746bp|location=Sequence derived from alignment at CM002458.1:753610..757228- (Nannochloropsis gaditana)
ATGCCCGGGGTCACCCGAAGGAGACCAGTCGCTGCCCCAGGATTGGCCAT
AGCTATTATTGCGTGCAGTTGGCATCTGAATCCTTGTGATGCGTTTCAAG
CTTCATCGTCATCAAGCAGACAGCGGCAGCTGCAGCATGGAAGGCAGATT
CAGCATCACACGACTTCCCTGAGAAAACAGGGGGAGGGCTTCGATGCTTT
TAAATTACCAGCGTCAAGAAGGACGCATGAGACGTCTACCTCGACCTCCT
CCTCAACTGCCCCGTCTCCTGCACCTCCAAACGCGCCCTCACCTTCTGTT
GTCCCTCTTTCCTCTCCCTCCTTTTCCTCCTCAAAGCCCCTGGAAGGAAC
TTTATTGGAGACCCGGTCATACTTCTCTGTAGAATTTCTTGCGCATCGCA
TGTCGTCCTCTGCGACACTCGCTGCTACAGGGGTACCCAGGCGCATGACT
GTGGAGAGCGAACAGAAGCAAAAGGCTGTCAAGCCGCTTGAAGACGAAGT
AGGGGAGGCGTGGCTGAGGGCACAGAAGGAGGTTGAAGCAAACCCAGAAT
CTATGCAGCAGGTTGAGGAAGAGGAAGAGCTGGTGTCCGTAGGAGTGATC
AGTCACCACGAGGCATTGGAGCTCCTCTGTCTCCGGGAGGGTCTGGGGGG
CCGTGGAGGGCGGGGAGGAGTGCACTACCACGACGGCGTTTCCTTGGACC
TGGGCCGAAGCGAGACTATGGTGGTTGTCACGGAGGAAGGTATCGCCGTG
CCTGTTGTGGAGGCAAGCCATCCCCGGCGCCCCCAAAGGGAGGCGCGAGA
GCCCGCCCTGGTGGCGACCTGGGGCGAGCTGGAGGACATCGTGGACCAAG
CCCGCAGGGGGCGACCGGGGTGCTTCACGCTCTACACGGACGGGACGCAG
CCCTGGAAGATCAGCGCGGTCAGCCTGCAGACAGGGCGGGCGGCCAACCT
CCTGCCCTCTCTGCACGTGAAAGGTCCGCCCACCGTGGTCCTGGGCTCCT
ACCGGATGCACCGCCTGGACGGCCCCCGCCCCGGGCGCTACTTGGGCCCC
GCCGAGGATACCCGGCGGAAACTCGACGCGATCAAGATGAAAAAGGTGTA
CGGGAAGGTGCTGGACACGACCACGGGCCTGGGTTACACAGCCATCGCGG
CAGCGCGGTGCGCGCACGTGACGGAGGTGGTGACAGTGGAGGCGGACCAA
GCCGCCCTTGAGATGTCGCGCTACAACCCCTGGAGCGCCGATCTGTTCTC
CTCCCCGTCCGTCCGTGCCTCCCAAGGCCTATCCCCTATCCATATGGTGC
AGGGCGACGTGTGCGAGCTCATCCATTCTTTCCGGGACAATGCCTTCGCC
GCCGTCATGCACGACCCCCCGTCCATGGCCCTCTCGCGCGCCGCCGTGCA
TCTCTATTCGCCCGCCTTCTATGCCCAGCTCTACCGGGTCCTACGCTGGC
GCGGCCGTCTCTTTCACTTCGTGGGCGGCCATCCAAAGGCCAAAGAGAAC
GCGCGCCTGTACAAGATGGTGGTGCAGAGGCTGGAAGCCGCCGGTTTTAA
GAAGGTGATGATCCTTGCCTCGGCGCAAGGAGTGGTGGCCGAGAAAGGCG
AAGACAGGAAGAGCAAAAAAGCGCTGCATGCCCGCAATGGGAGCGGGGAG
AGAGGATCGGGAGGAAAAGCGCAGCGGTTGAGGGCACAGCGGGAGTTCAT
GTGGGGCATGGACTTCTTGGGCGAGGAGGGGGAGGGGCTCGAGTAG back to top
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